Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010041E06.5 |
| Conread position: | 17-505 |
| Cow position: | chr9:64116589-64117080 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 47 |
| Conread position: | 24-174 |
| Cow position: | chr9:44521856-44521697 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 24-322 |
| Cow position: | chr9:59423840-59424139 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 85, 146 |
| Conread position: | 24-328 |
| Cow position: | chr9:6297162-6296873 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 24-502 |
| Cow position: | chr9:39991316-39991785 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 24-513 |
| Cow position: | chr9:5487143-5486639 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 85, 125 |
| Conread position: | 25-309 |
| Cow position: | chr9:52568640-52568916 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 120 |
| Conread position: | 26-328 |
| Cow position: | chr9:26586141-26585842 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 32-510 |
| Cow position: | chr9:249598-249117 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 140 |
| Conread position: | 35-398 |
| Cow position: | chr9:11320862-11321235 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 265, 77 |
| Conread position: | 36-264 |
| Cow position: | chr9:2006722-2006496 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 169, 75 |
| Conread position: | 38-174 |
| Cow position: | chr9:13732938-13733074 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 38-323 |
| Cow position: | chr9:19076928-19077221 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 40-323 |
| Cow position: | chr9:34109425-34109150 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 168, 87 |
| Conread position: | 46-311 |
| Cow position: | chr9:26713979-26713712 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 147 |
| Conread position: | 52-518 |
| Cow position: | chr9:26104176-26103695 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 76-323 |
| Cow position: | chr9:2628948-2629195 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 82-323 |
| Cow position: | chr9:35884327-35884561 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 5 |
| Conread position: | 108-502 |
| Cow position: | chr9:8974934-8974547 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 116, 64 |
| Conread position: | 155-505 |
| Cow position: | chr9:2842520-2842159 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 173, 27 |
| Conread position: | 312-494 |
| Cow position: | chr9:28001422-28001601 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 326-504 |
| Cow position: | chr9:34109122-34108941 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 328-502 |
| Cow position: | chr9:31775379-31775555 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 73 |
Show alignments to all cow chromosomes.