Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010041E06.5 |
| Conread position: | 22-174 |
| Cow position: | chrX:42863060-42862908 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 143 |
| Conread position: | 23-172 |
| Cow position: | chrX:2140981-2141131 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 23-322 |
| Cow position: | chrX:13050396-13050691 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 141 |
| Conread position: | 24-203 |
| Cow position: | chrX:31078242-31078420 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 24-323 |
| Cow position: | chrX:12999793-12999501 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 24-323 |
| Cow position: | chrX:22133707-22133407 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 24-323 |
| Cow position: | chrX:23219695-23219979 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 24-489 |
| Cow position: | chrX:34986554-34987032 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 98 |
| Conread position: | 25-153 |
| Cow position: | chrX:22551734-22551863 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 25-172 |
| Cow position: | chrX:30372105-30371960 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 25-175 |
| Cow position: | chrX:40116000-40116150 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 108 |
| Conread position: | 25-318 |
| Cow position: | chrX:17672606-17672317 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 175, 147 |
| Conread position: | 25-328 |
| Cow position: | chrX:28545480-28545776 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 180, 55 |
| Conread position: | 32-510 |
| Cow position: | chrX:11742214-11742700 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 48-328 |
| Cow position: | chrX:24374940-24375217 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 61, 110 |
| Conread position: | 326-494 |
| Cow position: | chrX:24375240-24375412 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 326-499 |
| Cow position: | chrX:30371792-30371617 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 73, 6 |
| Conread position: | 326-506 |
| Cow position: | chrX:22133380-22133199 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 327-506 |
| Cow position: | chrX:2141288-2141464 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 335-506 |
| Cow position: | chrX:23220016-23220188 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 498-676 |
| Cow position: | chrX:2141525-2141703 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 499-702 |
| Cow position: | chrX:22133167-22132960 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 502-654 |
| Cow position: | chrX:34987076-34987229 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 99, 72 |
| Conread position: | 813-1163 |
| Cow position: | chrX:22132262-22131905 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 142, 237 |
| Conread position: | 825-1151 |
| Cow position: | chrX:30370552-30370226 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 135, 47 |
Show alignments to all cow chromosomes.