Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR010051B01.5.5
        

               Conread position:
               10-219
               

               Cow position:
               chr2:50810573-50810785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               10-490
               

               Cow position:
               chr2:61916805-61916354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               41-260
               

               Cow position:
               chr2:15270969-15271186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               90-584
               

               Cow position:
               chr2:15561009-15560512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 20
               

               Conread position:
               247-471
               

               Cow position:
               chr2:50810783-50811004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               294-756
               

               Cow position:
               chr2:15271193-15271646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 150
               

               Conread position:
               514-913
               

               Cow position:
               chr2:61916357-61915976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               239, 123
               

               Conread position:
               596-751
               

               Cow position:
               chr2:15560524-15560375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               599-919
               

               Cow position:
               chr2:50813840-50814173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               749-912
               

               Cow position:
               chr2:15272101-15272263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 73
               
Show alignments to all cow chromosomes.