Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010061B08.5 |
| Conread position: | 2-220 |
| Cow position: | chr21:23710642-23710865 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 179-329 |
| Cow position: | chr21:23712066-23712216 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 128 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-329 |
| Cow position: | chr21:23776411-23776560 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 179-329 |
| Cow position: | chr21:23789455-23789605 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 179-329 |
| Cow position: | chr21:23794745-23794895 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-329 |
| Cow position: | chr21:23816382-23816532 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 179-329 |
| Cow position: | chr21:23832996-23832846 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 70, 97 |
| Conread position: | 179-329 |
| Cow position: | chr21:23857494-23857344 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 72, 89 |
| Conread position: | 179-329 |
| Cow position: | chr21:23879188-23879341 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 182-329 |
| Cow position: | chr21:23771116-23771264 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 87 |
| Conread position: | 328-459 |
| Cow position: | chr21:23712701-23712832 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-465 |
| Cow position: | chr21:23777090-23777227 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-465 |
| Cow position: | chr21:23795423-23795560 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-469 |
| Cow position: | chr21:23847237-23847097 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 328-489 |
| Cow position: | chr21:23790091-23790252 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 328-489 |
| Cow position: | chr21:23856854-23856693 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 330-489 |
| Cow position: | chr21:23771751-23771910 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 146, 141 |
| Conread position: | 463-644 |
| Cow position: | chr21:23713033-23713214 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-647 |
| Cow position: | chr21:23795759-23795943 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 464-648 |
| Cow position: | chr21:23777422-23777608 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.