Cow genome map

Conread name: Ss1.1-Utr1-UTR010062G02.5

Conread position: 1-678
Cow position: chr15:2648415-2647743 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 1-678
Cow position: chr15:35747534-35748206 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 19

Conread position: 2-386
Cow position: chr15:370429-370034 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 2-550
Cow position: chr15:21816499-21815960 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 17

Conread position: 2-654
Cow position: chr15:35734706-35735342 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 2-683
Cow position: chr15:36641873-36642533 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 3-678
Cow position: chr15:14583361-14582707 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 94

Conread position: 6-265
Cow position: chr15:14374150-14373891 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 113, 204

Conread position: 6-405
Cow position: chr15:20080260-20079865 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 6-591
Cow position: chr15:32680304-32679731 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 6-670
Cow position: chr15:4630674-4630015 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 287

Conread position: 6-675
Cow position: chr15:4677746-4678386 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 89

Conread position: 6-678
Cow position: chr15:1519902-1519237 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 6-678
Cow position: chr15:32692802-32693452 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 71

Conread position: 6-679
Cow position: chr15:17040009-17039343 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 669, 27

Conread position: 6-679
Cow position: chr15:18333587-18332914 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 486

Conread position: 6-679
Cow position: chr15:18575960-18576628 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 302

Conread position: 6-679
Cow position: chr15:42935957-42936628 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 665, 20

Conread position: 6-681
Cow position: chr15:1662636-1663285 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 7

Conread position: 6-684
Cow position: chr15:36970167-36970844 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 670, 11

Conread position: 7-387
Cow position: chr15:35754581-35754207 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 6

Conread position: 8-672
Cow position: chr15:17291699-17292344 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 108

Conread position: 10-599
Cow position: chr15:5910917-5910344 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 375
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 16

Conread position: 10-678
Cow position: chr15:4195719-4196376 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 11-253
Cow position: chr15:6650801-6650570 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 112

Conread position: 11-668
Cow position: chr15:41365427-41366077 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 226

Conread position: 11-676
Cow position: chr15:4794927-4795587 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 121

Conread position: 11-678
Cow position: chr15:8001002-8000321 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 214

Conread position: 11-678
Cow position: chr15:21960758-21961420 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 273

Conread position: 12-678
Cow position: chr15:17272132-17271484 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 200

Conread position: 13-204
Cow position: chr15:25789943-25789751 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 13-236
Cow position: chr15:38957779-38957550 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 18

Conread position: 13-391
Cow position: chr15:10787842-10787469 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 112

Conread position: 13-402
Cow position: chr15:685413-685808 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 328

Conread position: 13-411
Cow position: chr15:6371591-6371204 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 76

Conread position: 13-438
Cow position: chr15:327661-328083 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 29

Conread position: 13-535
Cow position: chr15:10479443-10478927 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 64

Conread position: 13-637
Cow position: chr15:7927880-7928486 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 63

Conread position: 13-678
Cow position: chr15:690066-690702 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 31

Conread position: 13-678
Cow position: chr15:6278008-6277347 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 321

Conread position: 13-678
Cow position: chr15:7544128-7544794 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 18

Conread position: 13-678
Cow position: chr15:36648161-36648820 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 206

Conread position: 13-683
Cow position: chr15:8407819-8408472 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 40

Conread position: 13-684
Cow position: chr15:24793303-24793966 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 208

Conread position: 16-589
Cow position: chr15:32722919-32722363 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 47

Conread position: 17-410
Cow position: chr15:7933233-7933610 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 17-511
Cow position: chr15:45886064-45886535 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 17-678
Cow position: chr15:4670676-4671341 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 104

Conread position: 17-678
Cow position: chr15:7233571-7234215 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 67

Conread position: 17-684
Cow position: chr15:17787892-17787250 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 115

Conread position: 18-194
Cow position: chr15:6456543-6456719 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 18-345
Cow position: chr15:6594571-6594246 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 47

Conread position: 18-365
Cow position: chr15:32709803-32710145 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 18-410
Cow position: chr15:44069046-44069438 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-465
Cow position: chr15:11598858-11598414 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 18-466
Cow position: chr15:2593544-2593114 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 18-498
Cow position: chr15:55462-55934 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 43

Conread position: 18-505
Cow position: chr15:317076-316613 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 18-538
Cow position: chr15:22204860-22204340 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-544
Cow position: chr15:13428302-13428818 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 18-567
Cow position: chr15:21878100-21877555 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 18-611
Cow position: chr15:44828068-44828660 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 371

Conread position: 18-638
Cow position: chr15:3262150-3261543 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 18-678
Cow position: chr15:443868-444521 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 18-678
Cow position: chr15:1781516-1782167 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 18-678
Cow position: chr15:2011344-2011994 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 95

Conread position: 18-678
Cow position: chr15:4649095-4649740 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 90

Conread position: 18-678
Cow position: chr15:4764468-4765117 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 13

Conread position: 18-678
Cow position: chr15:4960916-4961541 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 83

Conread position: 18-678
Cow position: chr15:6554599-6553944 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 18-678
Cow position: chr15:7894946-7894319 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 210

Conread position: 18-678
Cow position: chr15:10887864-10888517 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 18-678
Cow position: chr15:17080926-17080288 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 658, 77

Conread position: 18-678
Cow position: chr15:18268721-18268074 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 18-678
Cow position: chr15:20748666-20749329 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 18-678
Cow position: chr15:28490879-28490228 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 75

Conread position: 18-678
Cow position: chr15:32495132-32494473 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 303

Conread position: 18-678
Cow position: chr15:38979171-38979840 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 595

Conread position: 18-678
Cow position: chr15:42321162-42320508 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 18-678
Cow position: chr15:50124682-50124029 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 88

Conread position: 18-679
Cow position: chr15:4384528-4385182 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 354

Conread position: 18-679
Cow position: chr15:7836495-7837158 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 388

Conread position: 18-679
Cow position: chr15:12421910-12421251 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 191

Conread position: 18-679
Cow position: chr15:15347867-15347205 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 0

Conread position: 18-679
Cow position: chr15:24294344-24295006 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 0

Conread position: 18-679
Cow position: chr15:42490459-42491118 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 73

Conread position: 18-679
Cow position: chr15:51215847-51216503 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 317

Conread position: 18-683
Cow position: chr15:8098739-8099406 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 103

Conread position: 19-585
Cow position: chr15:35578758-35578206 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 359
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 90, 11

Conread position: 19-636
Cow position: chr15:525598-524979 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 141

Conread position: 19-678
Cow position: chr15:37391762-37392405 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 196

Conread position: 19-679
Cow position: chr15:31358158-31358800 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 141

Conread position: 19-683
Cow position: chr15:18023521-18022859 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 125

Conread position: 22-386
Cow position: chr15:50144756-50145123 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 225

Conread position: 22-675
Cow position: chr15:1771759-1772408 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 22-683
Cow position: chr15:4921406-4922069 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 13

Conread position: 26-684
Cow position: chr15:39439626-39438980 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 418
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 90

Conread position: 29-678
Cow position: chr15:3038261-3037599 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 75

Conread position: 29-683
Cow position: chr15:2006804-2007452 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 103

Conread position: 30-236
Cow position: chr15:12899707-12899912 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 183, 173

Conread position: 30-304
Cow position: chr15:3565207-3564934 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 223, 38

Conread position: 30-633
Cow position: chr15:29021010-29021603 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 373
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 138

Conread position: 30-678
Cow position: chr15:1763355-1764002 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 226

Conread position: 30-678
Cow position: chr15:6077999-6078653 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 150

Conread position: 30-678
Cow position: chr15:23157564-23156930 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 21

Conread position: 30-679
Cow position: chr15:2075925-2076562 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 643, 27

Conread position: 30-679
Cow position: chr15:6156695-6156039 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 109

Conread position: 30-679
Cow position: chr15:19738786-19738139 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 189

Conread position: 32-317
Cow position: chr15:21448342-21448613 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 32-619
Cow position: chr15:22920399-22920979 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 33-259
Cow position: chr15:2923784-2924011 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 43

Conread position: 35-678
Cow position: chr15:4681496-4682145 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 22

Conread position: 36-256
Cow position: chr15:6387022-6386802 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 58

Conread position: 36-646
Cow position: chr15:51800019-51800605 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 82

Conread position: 38-304
Cow position: chr15:24715369-24715631 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 94

Conread position: 46-678
Cow position: chr15:6472622-6472004 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 76

Conread position: 47-415
Cow position: chr15:6781003-6780643 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 54

Conread position: 48-678
Cow position: chr15:35648931-35648323 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 49-582
Cow position: chr15:16506901-16507420 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 359
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 83

Conread position: 50-677
Cow position: chr15:20357979-20357376 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 173

Conread position: 50-678
Cow position: chr15:4733149-4733771 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 115

Conread position: 51-665
Cow position: chr15:4109617-4109009 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 381
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 241, 34

Conread position: 58-678
Cow position: chr15:8749725-8750338 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 226

Conread position: 60-527
Cow position: chr15:3843525-3843065 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 82-550
Cow position: chr15:1253632-1254081 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 310
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 274, 49

Conread position: 87-675
Cow position: chr15:7259950-7260535 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 13

Conread position: 95-677
Cow position: chr15:13072598-13073171 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 381
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 13

Conread position: 103-684
Cow position: chr15:324284-324855 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 95

Conread position: 107-684
Cow position: chr15:21951170-21950634 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 363
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 40

Conread position: 113-684
Cow position: chr15:4170343-4169780 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 563, 112

Conread position: 119-433
Cow position: chr15:6326815-6326521 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 125-373
Cow position: chr15:5070890-5070651 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 24

Conread position: 125-672
Cow position: chr15:53338399-53338930 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 30

Conread position: 126-684
Cow position: chr15:40104832-40105381 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 91

Conread position: 127-511
Cow position: chr15:49676390-49676759 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 131-684
Cow position: chr15:12614432-12614981 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 50

Conread position: 138-684
Cow position: chr15:15266281-15265742 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 147

Conread position: 143-679
Cow position: chr15:21666368-21665832 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 532, 274

Conread position: 149-609
Cow position: chr15:7788979-7788527 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 80

Conread position: 153-678
Cow position: chr15:7523116-7522581 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 287

Conread position: 154-684
Cow position: chr15:36627257-36626752 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 17

Conread position: 163-520
Cow position: chr15:9428363-9428729 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 156, 41

Conread position: 174-682
Cow position: chr15:32733381-32732877 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 118

Conread position: 175-428
Cow position: chr15:13871175-13871428 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 186-678
Cow position: chr15:4811744-4812231 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 189-678
Cow position: chr15:29009267-29009752 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 0

Conread position: 209-678
Cow position: chr15:3888315-3888792 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 218-684
Cow position: chr15:51671809-51672267 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 228-678
Cow position: chr15:3010388-3009938 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 229-416
Cow position: chr15:2924019-2924206 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 162

Conread position: 229-681
Cow position: chr15:32672337-32672798 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 293
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 355

Conread position: 238-684
Cow position: chr15:16542144-16542585 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 49

Conread position: 256-684
Cow position: chr15:11299299-11298899 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 99, 32

Conread position: 260-684
Cow position: chr15:25789472-25789051 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 277-678
Cow position: chr15:1834948-1834548 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 149

Conread position: 288-678
Cow position: chr15:4143300-4142905 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 290

Conread position: 315-678
Cow position: chr15:7922091-7921730 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 322-492
Cow position: chr15:6650368-6650536 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 339-678
Cow position: chr15:25186369-25186050 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 342-683
Cow position: chr15:22151787-22152123 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 37

Conread position: 342-683
Cow position: chr15:24715807-24716136 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 45

Conread position: 348-602
Cow position: chr15:3564908-3564653 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 59

Conread position: 355-493
Cow position: chr15:32710312-32710450 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 359-682
Cow position: chr15:21448895-21449225 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 117

Conread position: 363-679
Cow position: chr15:35754000-35753684 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 225

Conread position: 372-684
Cow position: chr15:6621950-6622254 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 382-678
Cow position: chr15:50146695-50146991 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 384-684
Cow position: chr15:1236939-1237237 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 97

Conread position: 390-684
Cow position: chr15:44069547-44069842 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 0

Conread position: 399-678
Cow position: chr15:6593309-6593032 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 404-683
Cow position: chr15:6458615-6458901 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 127, 24

Conread position: 408-678
Cow position: chr15:2924533-2924799 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 24

Conread position: 408-678
Cow position: chr15:6370135-6369867 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 412-684
Cow position: chr15:370035-369771 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 191

Conread position: 413-678
Cow position: chr15:10787482-10787216 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 413-684
Cow position: chr15:686175-686444 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 131

Conread position: 421-678
Cow position: chr15:328093-328339 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 112, 0

Conread position: 427-678
Cow position: chr15:7934012-7934243 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 457-678
Cow position: chr15:2589774-2589558 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 457-678
Cow position: chr15:2592135-2591919 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 484-678
Cow position: chr15:56206-56400 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 496-678
Cow position: chr15:6650259-6650087 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 32

Conread position: 514-684
Cow position: chr15:9429277-9429458 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 518-678
Cow position: chr15:316113-315947 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 17

Conread position: 525-678
Cow position: chr15:32710453-32710606 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 132
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 534-678
Cow position: chr15:1882736-1882593 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 122
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 538-678
Cow position: chr15:5068623-5068763 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 121
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 556-678
Cow position: chr15:21623486-21623608 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 558-678
Cow position: chr15:5544585-5544705 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.