Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
| Conread position: | 2-320 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-684 |
| Cow position: | |
| Alignm length: | 686 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 5-683 |
| Cow position: | |
| Alignm length: | 685 |
| Alignm identity: | 426 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 6-515 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 132 |
| Conread position: | 7-495 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 318, 9 |
| Conread position: | 7-678 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 11-174 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 11-560 |
| Cow position: | |
| Alignm length: | 559 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 11-577 |
| Cow position: | |
| Alignm length: | 584 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 13-215 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 13-359 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 94 |
| Conread position: | 13-394 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 196 |
| Conread position: | 13-452 |
| Cow position: | |
| Alignm length: | 444 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 13-485 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 171 |
| Conread position: | 13-548 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 149 |
| Conread position: | 13-599 |
| Cow position: | |
| Alignm length: | 594 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 206 |
| Conread position: | 13-643 |
| Cow position: | |
| Alignm length: | 633 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 13-665 |
| Cow position: | |
| Alignm length: | 654 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 233 |
| Conread position: | 13-675 |
| Cow position: | |
| Alignm length: | 679 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 16-635 |
| Cow position: | |
| Alignm length: | 624 |
| Alignm identity: | 396 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 103, 206 |
| Conread position: | 17-678 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 658, 88 |
| Conread position: | 17-684 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 61 |
| Conread position: | 18-173 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-201 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 13 |
| Conread position: | 18-346 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 18-449 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-544 |
| Cow position: | |
| Alignm length: | 527 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-640 |
| Cow position: | |
| Alignm length: | 627 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 18-662 |
| Cow position: | |
| Alignm length: | 654 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 67 |
| Conread position: | 18-665 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 27 |
| Conread position: | 18-670 |
| Cow position: | |
| Alignm length: | 657 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 352 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 174 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 318 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 77 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 191 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 265 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 0 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 564, 458 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 41 |
| Conread position: | 19-527 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 319 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 20-216 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 30-335 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 30-678 |
| Cow position: | |
| Alignm length: | 654 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 83 |
| Conread position: | 33-608 |
| Cow position: | |
| Alignm length: | 590 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 89 |
| Conread position: | 41-281 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 161, 8 |
| Conread position: | 50-683 |
| Cow position: | |
| Alignm length: | 637 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 50 |
| Conread position: | 54-522 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 54-683 |
| Cow position: | |
| Alignm length: | 634 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 60-336 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 61, 143 |
| Conread position: | 60-678 |
| Cow position: | |
| Alignm length: | 623 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 11 |
| Conread position: | 77-684 |
| Cow position: | |
| Alignm length: | 609 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 598, 59 |
| Conread position: | 86-428 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 102-327 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 103-610 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 173 |
| Conread position: | 126-678 |
| Cow position: | |
| Alignm length: | 554 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 70 |
| Conread position: | 144-622 |
| Cow position: | |
| Alignm length: | 491 |
| Alignm identity: | 304 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 147-469 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 147-678 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 152-684 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 350 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 7, 163 |
| Conread position: | 153-571 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 31 |
| Conread position: | 160-544 |
| Cow position: | |
| Alignm length: | 387 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 162-449 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 177-684 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 200-679 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 475, 190 |
| Conread position: | 219-638 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 228-670 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 229-583 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 184, 179 |
| Conread position: | 256-504 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 269-570 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 315-568 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 339-678 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 229 |
| Conread position: | 342-678 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 27 |
| Conread position: | 342-678 |
| Cow position: | |
| Alignm length: | 338 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 348-684 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 134, 32 |
| Conread position: | 359-543 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 359-658 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 363-684 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 118, 124 |
| Conread position: | 364-678 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 372-578 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 378-669 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 383-684 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 386-684 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 389-684 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 175, 13 |
| Conread position: | 399-683 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 412-652 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 425-678 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 480-678 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 481-684 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 483-624 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-678 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 495-679 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 498-647 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 517-678 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 136 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 534-678 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 550-684 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 550-684 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 553-684 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 562-678 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 581-678 |
| Cow position: | |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.