Cow genome map

Conread name: Ss1.1-Utr1-UTR010062G02.5

Conread position: 1-678
Cow position: chr2:82166742-82167406 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 2-336
Cow position: chr2:75250899-75251210 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 2-395
Cow position: chr2:66309991-66309610 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 248
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 18

Conread position: 2-558
Cow position: chr2:32458889-32458332 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 228

Conread position: 3-493
Cow position: chr2:782603-782140 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 5-681
Cow position: chr2:2357334-2356666 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 187

Conread position: 6-678
Cow position: chr2:11160002-11159330 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 508

Conread position: 6-678
Cow position: chr2:19009358-19010029 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 135

Conread position: 6-679
Cow position: chr2:28651101-28650432 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 233

Conread position: 6-679
Cow position: chr2:42672259-42671589 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 237

Conread position: 6-679
Cow position: chr2:50984101-50983430 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 669, 20

Conread position: 6-679
Cow position: chr2:53328875-53329545 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 205

Conread position: 6-683
Cow position: chr2:42334138-42333488 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 12

Conread position: 6-683
Cow position: chr2:78761612-78762272 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 152

Conread position: 8-671
Cow position: chr2:5871198-5870564 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 11-640
Cow position: chr2:85356637-85356019 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 11-647
Cow position: chr2:35352512-35353133 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 11-678
Cow position: chr2:6773031-6772375 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 11-678
Cow position: chr2:11969622-11968972 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 46

Conread position: 13-238
Cow position: chr2:15578520-15578298 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 9

Conread position: 13-340
Cow position: chr2:36031925-36031611 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 5, 147

Conread position: 13-439
Cow position: chr2:1491293-1490870 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 204

Conread position: 13-450
Cow position: chr2:32388700-32389127 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 18

Conread position: 13-488
Cow position: chr2:41149191-41149650 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 37

Conread position: 13-555
Cow position: chr2:6877627-6878152 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 110

Conread position: 13-594
Cow position: chr2:43958764-43959322 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 121

Conread position: 13-625
Cow position: chr2:52655606-52656210 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 17

Conread position: 13-668
Cow position: chr2:16288387-16289013 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 148

Conread position: 13-670
Cow position: chr2:769254-768599 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 100

Conread position: 13-675
Cow position: chr2:41171828-41172472 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 128

Conread position: 13-678
Cow position: chr2:5481502-5480872 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 196

Conread position: 13-678
Cow position: chr2:44345847-44346512 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 36

Conread position: 13-678
Cow position: chr2:44935933-44935289 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 13-678
Cow position: chr2:44992148-44991499 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 141

Conread position: 13-678
Cow position: chr2:52152720-52152066 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 299

Conread position: 13-678
Cow position: chr2:72922697-72922034 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 19

Conread position: 13-679
Cow position: chr2:32654485-32655135 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 89

Conread position: 13-682
Cow position: chr2:53552318-53552971 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 72

Conread position: 13-684
Cow position: chr2:20903991-20903366 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 103

Conread position: 15-451
Cow position: chr2:47604659-47604239 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 16-652
Cow position: chr2:56438583-56437960 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 129

Conread position: 16-678
Cow position: chr2:10844200-10843553 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 17-181
Cow position: chr2:44166207-44166044 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 82

Conread position: 17-253
Cow position: chr2:2363291-2363526 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 30

Conread position: 17-512
Cow position: chr2:43366785-43366302 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 314
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 43

Conread position: 17-527
Cow position: chr2:67015018-67014526 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 326
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 38

Conread position: 17-678
Cow position: chr2:2102316-2101673 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 17-678
Cow position: chr2:46945800-46946464 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 30

Conread position: 17-678
Cow position: chr2:53474005-53473364 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 17-681
Cow position: chr2:1673510-1672867 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 18-331
Cow position: chr2:27816914-27817227 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-337
Cow position: chr2:24921484-24921802 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 18-380
Cow position: chr2:8117378-8117750 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 303

Conread position: 18-390
Cow position: chr2:54736768-54737133 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 18-393
Cow position: chr2:45214118-45213743 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 212

Conread position: 18-449
Cow position: chr2:5519852-5519419 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 18-471
Cow position: chr2:12225010-12224556 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 80

Conread position: 18-576
Cow position: chr2:26865401-26864860 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 18-595
Cow position: chr2:24145415-24145984 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 18-670
Cow position: chr2:77207817-77208430 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 520, 30

Conread position: 18-674
Cow position: chr2:65939309-65938657 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 0

Conread position: 18-675
Cow position: chr2:57334342-57334990 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 199

Conread position: 18-678
Cow position: chr2:213086-212424 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 113

Conread position: 18-678
Cow position: chr2:2413652-2412999 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 20

Conread position: 18-678
Cow position: chr2:6959888-6960544 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 11

Conread position: 18-678
Cow position: chr2:25031330-25030679 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 18-678
Cow position: chr2:39420732-39421376 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 192

Conread position: 18-678
Cow position: chr2:44090444-44091098 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 77

Conread position: 18-678
Cow position: chr2:47039266-47038617 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 44

Conread position: 18-678
Cow position: chr2:51991392-51990733 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 18-678
Cow position: chr2:52615609-52616269 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 582

Conread position: 18-678
Cow position: chr2:57142549-57141889 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 29

Conread position: 18-678
Cow position: chr2:80956503-80955839 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 95

Conread position: 18-678
Cow position: chr2:81255946-81256602 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 102

Conread position: 18-679
Cow position: chr2:283555-282893 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 212

Conread position: 18-679
Cow position: chr2:10187085-10186434 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 189

Conread position: 18-679
Cow position: chr2:16899383-16900048 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 225

Conread position: 18-679
Cow position: chr2:47810162-47810812 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 18-681
Cow position: chr2:2380266-2380907 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 188

Conread position: 18-682
Cow position: chr2:15580849-15580187 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 155

Conread position: 18-684
Cow position: chr2:3325429-3324760 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 0

Conread position: 18-684
Cow position: chr2:26920834-26921500 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 658, 408

Conread position: 19-449
Cow position: chr2:67421704-67421276 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 191

Conread position: 19-610
Cow position: chr2:20027932-20028520 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 375
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 39

Conread position: 19-632
Cow position: chr2:4235324-4235908 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 113

Conread position: 19-658
Cow position: chr2:80586245-80586883 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 74

Conread position: 19-683
Cow position: chr2:50321437-50322084 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 20-514
Cow position: chr2:11724983-11725476 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 315
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 150, 111

Conread position: 20-679
Cow position: chr2:50076744-50077395 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 27

Conread position: 20-683
Cow position: chr2:1647304-1647966 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 92

Conread position: 21-522
Cow position: chr2:38589326-38589797 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 21-678
Cow position: chr2:41685654-41686313 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 79

Conread position: 21-678
Cow position: chr2:49471388-49472044 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 25

Conread position: 22-678
Cow position: chr2:59414521-59413883 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 502, 73

Conread position: 29-588
Cow position: chr2:5886977-5886429 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 338
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 25

Conread position: 29-684
Cow position: chr2:36991043-36991689 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 102

Conread position: 29-684
Cow position: chr2:49603881-49604519 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 49

Conread position: 30-207
Cow position: chr2:36979252-36979430 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 30-343
Cow position: chr2:51305747-51305445 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 30-413
Cow position: chr2:75676713-75676348 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 243
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 30-529
Cow position: chr2:976121-975629 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 175

Conread position: 30-529
Cow position: chr2:27611927-27611441 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 316
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 51, 101

Conread position: 30-540
Cow position: chr2:52680584-52681082 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 58

Conread position: 30-678
Cow position: chr2:2185107-2184459 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 30-678
Cow position: chr2:5905698-5905066 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 0

Conread position: 30-678
Cow position: chr2:22076944-22077585 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 69

Conread position: 30-678
Cow position: chr2:41656238-41656879 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 30-678
Cow position: chr2:52061820-52062464 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 30-679
Cow position: chr2:10269507-10268861 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 643, 166

Conread position: 30-684
Cow position: chr2:16077147-16076492 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 188

Conread position: 31-601
Cow position: chr2:54649647-54649102 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 26

Conread position: 32-684
Cow position: chr2:22136749-22136123 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 419
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 88

Conread position: 33-672
Cow position: chr2:78741297-78741924 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 489, 44

Conread position: 33-678
Cow position: chr2:422220-422864 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 439

Conread position: 33-683
Cow position: chr2:13046525-13045903 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 640, 170

Conread position: 33-684
Cow position: chr2:75175511-75176147 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 399
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 9, 19

Conread position: 34-446
Cow position: chr2:25889052-25888640 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 177

Conread position: 36-622
Cow position: chr2:2079739-2080324 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 368
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 110

Conread position: 36-638
Cow position: chr2:202488-201908 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 33

Conread position: 36-683
Cow position: chr2:80516226-80516862 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 130

Conread position: 41-583
Cow position: chr2:52174151-52173624 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 48-670
Cow position: chr2:14560370-14560969 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 27

Conread position: 50-526
Cow position: chr2:10733659-10733196 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 50-668
Cow position: chr2:3749082-3749704 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 5

Conread position: 53-607
Cow position: chr2:67430246-67430770 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 368
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 416, 43

Conread position: 54-677
Cow position: chr2:63293400-63292769 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 258

Conread position: 58-678
Cow position: chr2:9907090-9907710 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 59-527
Cow position: chr2:72682949-72682486 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 6

Conread position: 62-419
Cow position: chr2:3439571-3439923 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 125

Conread position: 70-544
Cow position: chr2:20921589-20921128 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 316
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 85, 61

Conread position: 70-684
Cow position: chr2:72109325-72108742 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 74-681
Cow position: chr2:28746689-28747261 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 48

Conread position: 78-678
Cow position: chr2:176333-175730 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 57

Conread position: 89-684
Cow position: chr2:13487911-13488490 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 179

Conread position: 107-511
Cow position: chr2:11703387-11703773 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 262
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 257, 18

Conread position: 108-543
Cow position: chr2:3729963-3730389 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 7

Conread position: 109-672
Cow position: chr2:24907867-24907310 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 344
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 59

Conread position: 114-592
Cow position: chr2:39970697-39971160 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 302
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 21

Conread position: 114-624
Cow position: chr2:46536911-46536405 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 325
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 36

Conread position: 115-681
Cow position: chr2:28621588-28621028 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 30

Conread position: 126-336
Cow position: chr2:37790901-37790697 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 179, 72

Conread position: 127-615
Cow position: chr2:5864847-5864383 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 319
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 31, 16

Conread position: 129-413
Cow position: chr2:46465960-46465681 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 131-678
Cow position: chr2:10712180-10711639 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 254

Conread position: 132-482
Cow position: chr2:20844651-20844991 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 220
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 87

Conread position: 135-675
Cow position: chr2:4405093-4404554 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 458, 0

Conread position: 147-684
Cow position: chr2:34565660-34565127 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 0

Conread position: 153-572
Cow position: chr2:20876341-20875948 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 153-678
Cow position: chr2:26868549-26869065 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 64

Conread position: 153-683
Cow position: chr2:20874879-20874378 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 154-683
Cow position: chr2:7901557-7902080 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 44

Conread position: 158-684
Cow position: chr2:7210983-7211499 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 61

Conread position: 172-640
Cow position: chr2:61130994-61130574 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 37

Conread position: 175-682
Cow position: chr2:45921947-45921461 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 176-652
Cow position: chr2:10294429-10294909 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 16

Conread position: 181-570
Cow position: chr2:46402957-46402578 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 112

Conread position: 186-504
Cow position: chr2:324511-324198 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 33

Conread position: 186-678
Cow position: chr2:5814104-5813588 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 74

Conread position: 188-474
Cow position: chr2:40245367-40245649 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 188-682
Cow position: chr2:50402581-50403062 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 198-592
Cow position: chr2:46740720-46740318 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 249
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 97

Conread position: 199-589
Cow position: chr2:10730236-10729849 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 51

Conread position: 199-658
Cow position: chr2:51365289-51364839 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 283
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 83

Conread position: 199-679
Cow position: chr2:28792565-28793050 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 321

Conread position: 199-679
Cow position: chr2:36979699-36980174 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 70

Conread position: 202-684
Cow position: chr2:28643797-28643330 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 203-660
Cow position: chr2:11691517-11691959 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 294
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 208, 178

Conread position: 204-678
Cow position: chr2:44106768-44106311 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 42

Conread position: 218-678
Cow position: chr2:1490637-1490179 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 49

Conread position: 228-650
Cow position: chr2:5890711-5890301 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 271
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 46, 65

Conread position: 232-683
Cow position: chr2:290479-290031 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 67

Conread position: 233-589
Cow position: chr2:73191291-73191630 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 298, 77

Conread position: 233-684
Cow position: chr2:15578222-15577768 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 266-684
Cow position: chr2:39621673-39622089 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 271-684
Cow position: chr2:3837590-3837207 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 292-683
Cow position: chr2:36054223-36053850 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 46

Conread position: 295-665
Cow position: chr2:14821926-14822285 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 14

Conread position: 303-684
Cow position: chr2:74391694-74391302 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 150

Conread position: 310-486
Cow position: chr2:3837721-3837897 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 47

Conread position: 322-678
Cow position: chr2:6755879-6755519 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 84

Conread position: 324-678
Cow position: chr2:2363641-2363981 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 333-614
Cow position: chr2:34935034-34935319 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 29

Conread position: 344-622
Cow position: chr2:11399291-11399018 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 67

Conread position: 348-679
Cow position: chr2:24921866-24922199 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 364-683
Cow position: chr2:14518968-14518657 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 175

Conread position: 372-655
Cow position: chr2:66309601-66309318 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 72

Conread position: 373-570
Cow position: chr2:8118055-8118252 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 375-678
Cow position: chr2:36031241-36030937 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 127

Conread position: 378-621
Cow position: chr2:31550235-31550477 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 9

Conread position: 378-678
Cow position: chr2:10612130-10611829 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 383-678
Cow position: chr2:51305232-51304939 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 16

Conread position: 384-684
Cow position: chr2:1111737-1111446 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 41

Conread position: 386-569
Cow position: chr2:15062815-15062634 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 10

Conread position: 390-554
Cow position: chr2:29147901-29147736 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 400-678
Cow position: chr2:4926662-4926379 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 402-684
Cow position: chr2:59963708-59963427 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 133, 88

Conread position: 403-652
Cow position: chr2:52350326-52350573 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 131, 120

Conread position: 411-678
Cow position: chr2:45213758-45213488 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 18

Conread position: 411-681
Cow position: chr2:45968821-45968558 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 206, 18

Conread position: 417-665
Cow position: chr2:46465596-46465348 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 75

Conread position: 432-595
Cow position: chr2:6638688-6638851 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 436-675
Cow position: chr2:54737065-54737302 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 441-684
Cow position: chr2:32389345-32389588 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 179

Conread position: 446-672
Cow position: chr2:47603889-47603672 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 48, 101

Conread position: 451-675
Cow position: chr2:67419729-67419505 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 459-678
Cow position: chr2:5474094-5474313 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 459-684
Cow position: chr2:28616627-28616405 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 461-681
Cow position: chr2:5485673-5485452 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 105, 192

Conread position: 462-683
Cow position: chr2:49625503-49625720 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 463-678
Cow position: chr2:2088591-2088376 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 529-678
Cow position: chr2:49590049-49590198 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 127
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 552-678
Cow position: chr2:85068888-85068762 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-684
Cow position: chr2:41149666-41149792 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 565-678
Cow position: chr2:57588381-57588493 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.