Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 114 |
| Conread position: | 3-683 |
| Cow position: | |
| Alignm length: | 688 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 13 |
| Conread position: | 6-678 |
| Cow position: | |
| Alignm length: | 685 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 6-679 |
| Cow position: | |
| Alignm length: | 675 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 669, 0 |
| Conread position: | 6-683 |
| Cow position: | |
| Alignm length: | 686 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 8-683 |
| Cow position: | |
| Alignm length: | 683 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 10-226 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-471 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 212 |
| Conread position: | 10-675 |
| Cow position: | |
| Alignm length: | 668 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 670 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 207 |
| Conread position: | 13-277 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 5, 160 |
| Conread position: | 13-385 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 16-670 |
| Cow position: | |
| Alignm length: | 657 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 68 |
| Conread position: | 17-463 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 17-541 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 335 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 98, 40 |
| Conread position: | 17-636 |
| Cow position: | |
| Alignm length: | 637 |
| Alignm identity: | 419 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 109, 37 |
| Conread position: | 17-678 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 42 |
| Conread position: | 17-683 |
| Cow position: | |
| Alignm length: | 690 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 214 |
| Conread position: | 18-161 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-196 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-204 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 77 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 529 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 199 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 666 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 113 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 506, 95 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 349 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 668 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 265 |
| Conread position: | 19-384 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 177 |
| Conread position: | 19-474 |
| Cow position: | |
| Alignm length: | 459 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 73 |
| Conread position: | 30-508 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 178 |
| Conread position: | 30-521 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 651 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 645, 179 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 653 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 92 |
| Conread position: | 33-679 |
| Cow position: | |
| Alignm length: | 648 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 33-679 |
| Cow position: | |
| Alignm length: | 648 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 642, 22 |
| Conread position: | 33-679 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 251 |
| Conread position: | 36-464 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 87 |
| Conread position: | 36-684 |
| Cow position: | |
| Alignm length: | 649 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 49-476 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 53-433 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 0 |
| Conread position: | 93-401 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 93-658 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 365 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 99-429 |
| Cow position: | |
| Alignm length: | 333 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 184 |
| Conread position: | 103-679 |
| Cow position: | |
| Alignm length: | 579 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 181 |
| Conread position: | 108-684 |
| Cow position: | |
| Alignm length: | 584 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 150 |
| Conread position: | 114-661 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 21 |
| Conread position: | 131-558 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-541 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 161-391 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 58, 178 |
| Conread position: | 175-506 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 212, 66 |
| Conread position: | 179-678 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 192-683 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 200-679 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 300 |
| Conread position: | 202-679 |
| Cow position: | |
| Alignm length: | 479 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 473, 81 |
| Conread position: | 241-678 |
| Cow position: | |
| Alignm length: | 453 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 339 |
| Conread position: | 242-652 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 281, 32 |
| Conread position: | 258-684 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-678 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 271-683 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 38 |
| Conread position: | 311-679 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 327-684 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 358-638 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 369-684 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 373-682 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 378-661 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 16, 124 |
| Conread position: | 384-627 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 387-658 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 392-684 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 432-621 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 432-678 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 85, 56 |
| Conread position: | 436-684 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 472-671 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 493-678 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 553-678 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.