Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
| Conread position: | 1-640 |
| Cow position: | |
| Alignm length: | 640 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-678 |
| Cow position: | |
| Alignm length: | 679 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 16 |
| Conread position: | 2-684 |
| Cow position: | |
| Alignm length: | 703 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 17 |
| Conread position: | 3-684 |
| Cow position: | |
| Alignm length: | 697 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 5-678 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 215 |
| Conread position: | 6-483 |
| Cow position: | |
| Alignm length: | 478 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-678 |
| Cow position: | |
| Alignm length: | 674 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 6-679 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 6-682 |
| Cow position: | |
| Alignm length: | 689 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 7-543 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 7-678 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 7-678 |
| Cow position: | |
| Alignm length: | 674 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 8-678 |
| Cow position: | |
| Alignm length: | 673 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 11-625 |
| Cow position: | |
| Alignm length: | 625 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 308 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 670 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 200 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 674 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 12-488 |
| Cow position: | |
| Alignm length: | 480 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 13-504 |
| Cow position: | |
| Alignm length: | 495 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 35 |
| Conread position: | 13-523 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 191 |
| Conread position: | 13-607 |
| Cow position: | |
| Alignm length: | 605 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 64 |
| Conread position: | 13-666 |
| Cow position: | |
| Alignm length: | 674 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 13-671 |
| Cow position: | |
| Alignm length: | 691 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 293 |
| Conread position: | 17-181 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 17-557 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 166 |
| Conread position: | 18-149 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-332 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 18-379 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 18-413 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 0 |
| Conread position: | 18-447 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 0 |
| Conread position: | 18-630 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 18-636 |
| Cow position: | |
| Alignm length: | 628 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 113 |
| Conread position: | 18-651 |
| Cow position: | |
| Alignm length: | 639 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 18-658 |
| Cow position: | |
| Alignm length: | 641 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 560, 0 |
| Conread position: | 18-675 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 180 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 292 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 210 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 77 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 113 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 666 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 78 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 365 |
| Conread position: | 18-683 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 188 |
| Conread position: | 20-205 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 26-684 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 26-684 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 30-304 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 30-334 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 20, 176 |
| Conread position: | 30-391 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 245, 22 |
| Conread position: | 30-448 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 191, 91 |
| Conread position: | 30-511 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-678 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 105 |
| Conread position: | 30-678 |
| Cow position: | |
| Alignm length: | 659 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 16 |
| Conread position: | 30-683 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 32-630 |
| Cow position: | |
| Alignm length: | 607 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 33-678 |
| Cow position: | |
| Alignm length: | 646 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 33-679 |
| Cow position: | |
| Alignm length: | 648 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 642, 0 |
| Conread position: | 36-670 |
| Cow position: | |
| Alignm length: | 635 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 49-582 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 51-622 |
| Cow position: | |
| Alignm length: | 597 |
| Alignm identity: | 372 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 168, 83 |
| Conread position: | 98-683 |
| Cow position: | |
| Alignm length: | 589 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 104-662 |
| Cow position: | |
| Alignm length: | 563 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 11 |
| Conread position: | 113-683 |
| Cow position: | |
| Alignm length: | 580 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 115-619 |
| Cow position: | |
| Alignm length: | 510 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 124, 151 |
| Conread position: | 117-354 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 122-622 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 152, 9 |
| Conread position: | 131-670 |
| Cow position: | |
| Alignm length: | 541 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 133-678 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 177-683 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 40 |
| Conread position: | 203-681 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 282 |
| Conread position: | 203-683 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 204-683 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 209-670 |
| Cow position: | |
| Alignm length: | 463 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 100 |
| Conread position: | 220-610 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 232-679 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 280 |
| Conread position: | 241-670 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 243-594 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-678 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 256-684 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 79 |
| Conread position: | 284-634 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 295-527 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 296-663 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-675 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 310-610 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 185, 111 |
| Conread position: | 322-627 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 324-525 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 340-659 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 231, 71 |
| Conread position: | 348-678 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-678 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 359-670 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 361-658 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 372-675 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 31 |
| Conread position: | 374-679 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 8 |
| Conread position: | 376-616 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 384-684 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 424-678 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-678 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-679 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 228, 111 |
| Conread position: | 457-678 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 509-678 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 141 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 509-679 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 523-684 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 540-678 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.