Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
| Conread position: | 1-304 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 3-402 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 3-621 |
| Cow position: | |
| Alignm length: | 623 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 6-595 |
| Cow position: | |
| Alignm length: | 594 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 156 |
| Conread position: | 6-678 |
| Cow position: | |
| Alignm length: | 681 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 192 |
| Conread position: | 6-678 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 8-557 |
| Cow position: | |
| Alignm length: | 555 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 91 |
| Conread position: | 11-639 |
| Cow position: | |
| Alignm length: | 631 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 207 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 13-525 |
| Cow position: | |
| Alignm length: | 515 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 126 |
| Conread position: | 13-674 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 642 |
| Conread position: | 13-678 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 13-679 |
| Cow position: | |
| Alignm length: | 688 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 17-317 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 17-625 |
| Cow position: | |
| Alignm length: | 627 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 117 |
| Conread position: | 17-678 |
| Cow position: | |
| Alignm length: | 665 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 370 |
| Conread position: | 18-207 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-314 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 18-336 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 109 |
| Conread position: | 18-637 |
| Cow position: | |
| Alignm length: | 622 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 83 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 500 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 505, 97 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 95 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 408 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 417 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 575, 265 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 655, 195 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 191 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 562, 490 |
| Conread position: | 18-683 |
| Cow position: | |
| Alignm length: | 669 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 274 |
| Conread position: | 19-210 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 19-496 |
| Cow position: | |
| Alignm length: | 488 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 271, 47 |
| Conread position: | 25-678 |
| Cow position: | |
| Alignm length: | 655 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 30-336 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 30-665 |
| Cow position: | |
| Alignm length: | 637 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 180 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 189 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 652 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 243 |
| Conread position: | 33-352 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 33-678 |
| Cow position: | |
| Alignm length: | 647 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 163 |
| Conread position: | 46-199 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-683 |
| Cow position: | |
| Alignm length: | 643 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 101 |
| Conread position: | 49-684 |
| Cow position: | |
| Alignm length: | 639 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 50-422 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 86 |
| Conread position: | 51-615 |
| Cow position: | |
| Alignm length: | 568 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 127 |
| Conread position: | 52-387 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 55-645 |
| Cow position: | |
| Alignm length: | 594 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 62-319 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 87-678 |
| Cow position: | |
| Alignm length: | 592 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 0 |
| Conread position: | 101-678 |
| Cow position: | |
| Alignm length: | 583 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 222 |
| Conread position: | 106-662 |
| Cow position: | |
| Alignm length: | 563 |
| Alignm identity: | 333 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 108-678 |
| Cow position: | |
| Alignm length: | 571 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 0 |
| Conread position: | 116-317 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 125-683 |
| Cow position: | |
| Alignm length: | 573 |
| Alignm identity: | 358 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 132-420 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 250, 177 |
| Conread position: | 139-683 |
| Cow position: | |
| Alignm length: | 557 |
| Alignm identity: | 359 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 141-683 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 534, 228 |
| Conread position: | 149-679 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 173-643 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 48 |
| Conread position: | 191-662 |
| Cow position: | |
| Alignm length: | 490 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 18 |
| Conread position: | 196-684 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 199-668 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 199-679 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 476, 225 |
| Conread position: | 205-490 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 241-682 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 191 |
| Conread position: | 247-672 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 283-678 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 289-656 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 295-683 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 138, 62 |
| Conread position: | 297-672 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 59 |
| Conread position: | 310-684 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 146 |
| Conread position: | 322-679 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 322-683 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 28 |
| Conread position: | 348-673 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 358-678 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 65, 295 |
| Conread position: | 365-660 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 365-678 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 372-547 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 372-683 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 106 |
| Conread position: | 376-644 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 381-604 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 40 |
| Conread position: | 404-655 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 412-678 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 43 |
| Conread position: | 412-683 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 11, 162 |
| Conread position: | 432-586 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 433-643 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 446-683 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 115 |
| Conread position: | 469-678 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 470-678 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 470-678 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 470-683 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 486-682 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.