Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
| Conread position: | 1-253 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 168, 28 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 199, 17 |
| Conread position: | 2-672 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 509, 23 |
| Conread position: | 2-681 |
| Cow position: | |
| Alignm length: | 681 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 18 |
| Conread position: | 2-684 |
| Cow position: | |
| Alignm length: | 683 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 2-684 |
| Cow position: | |
| Alignm length: | 687 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 17 |
| Conread position: | 6-512 |
| Cow position: | |
| Alignm length: | 520 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 413, 125 |
| Conread position: | 6-678 |
| Cow position: | |
| Alignm length: | 673 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-683 |
| Cow position: | |
| Alignm length: | 685 |
| Alignm identity: | 425 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 6-684 |
| Cow position: | |
| Alignm length: | 683 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 7-433 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 7-659 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 318 |
| Conread position: | 8-657 |
| Cow position: | |
| Alignm length: | 651 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 10-547 |
| Cow position: | |
| Alignm length: | 555 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 10-678 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 8 |
| Conread position: | 11-678 |
| Cow position: | |
| Alignm length: | 684 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 13-167 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 131 |
| Conread position: | 13-504 |
| Cow position: | |
| Alignm length: | 493 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 283 |
| Conread position: | 13-527 |
| Cow position: | |
| Alignm length: | 516 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 186 |
| Conread position: | 13-681 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 42 |
| Conread position: | 13-684 |
| Cow position: | |
| Alignm length: | 675 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 52 |
| Conread position: | 13-684 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 17-386 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 17-582 |
| Cow position: | |
| Alignm length: | 569 |
| Alignm identity: | 353 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 396, 193 |
| Conread position: | 17-684 |
| Cow position: | |
| Alignm length: | 668 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 17-684 |
| Cow position: | |
| Alignm length: | 681 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 106 |
| Conread position: | 18-163 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 18-236 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 18-252 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-393 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 18-491 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 18-655 |
| Cow position: | |
| Alignm length: | 639 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-670 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 275 |
| Conread position: | 18-675 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 517 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 670 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 520 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 470 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 108 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 661 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 0 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 672 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 239 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 191 |
| Conread position: | 19-439 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 187 |
| Conread position: | 19-646 |
| Cow position: | |
| Alignm length: | 646 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 21-187 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 21-678 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-678 |
| Cow position: | |
| Alignm length: | 666 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 141 |
| Conread position: | 22-498 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 22-678 |
| Cow position: | |
| Alignm length: | 676 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 30-194 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-252 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 30-285 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 187, 66 |
| Conread position: | 30-394 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 101 |
| Conread position: | 30-581 |
| Cow position: | |
| Alignm length: | 555 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 176 |
| Conread position: | 30-678 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 189 |
| Conread position: | 30-678 |
| Cow position: | |
| Alignm length: | 651 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 65 |
| Conread position: | 30-678 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 62 |
| Conread position: | 30-684 |
| Cow position: | |
| Alignm length: | 659 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 33-168 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-658 |
| Cow position: | |
| Alignm length: | 625 |
| Alignm identity: | 396 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 282, 33 |
| Conread position: | 46-282 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 90 |
| Conread position: | 50-658 |
| Cow position: | |
| Alignm length: | 612 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 132 |
| Conread position: | 51-405 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 88 |
| Conread position: | 53-252 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 53-684 |
| Cow position: | |
| Alignm length: | 636 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 54-683 |
| Cow position: | |
| Alignm length: | 635 |
| Alignm identity: | 376 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 320, 55 |
| Conread position: | 63-493 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 0 |
| Conread position: | 72-678 |
| Cow position: | |
| Alignm length: | 607 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-537 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 183, 29 |
| Conread position: | 106-624 |
| Cow position: | |
| Alignm length: | 521 |
| Alignm identity: | 321 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 107-542 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 61 |
| Conread position: | 125-542 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 96 |
| Conread position: | 131-683 |
| Cow position: | |
| Alignm length: | 561 |
| Alignm identity: | 353 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 163-684 |
| Cow position: | |
| Alignm length: | 524 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 98 |
| Conread position: | 166-684 |
| Cow position: | |
| Alignm length: | 519 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 177-684 |
| Cow position: | |
| Alignm length: | 512 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 57 |
| Conread position: | 180-625 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-684 |
| Cow position: | |
| Alignm length: | 501 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 188-671 |
| Cow position: | |
| Alignm length: | 484 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 0 |
| Conread position: | 199-679 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 456 |
| Conread position: | 227-683 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 228-678 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 190 |
| Conread position: | 249-678 |
| Cow position: | |
| Alignm length: | 431 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 237 |
| Conread position: | 250-463 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 266-476 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 111, 129 |
| Conread position: | 277-678 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 167 |
| Conread position: | 325-679 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 13 |
| Conread position: | 342-610 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 168 |
| Conread position: | 345-625 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 365-681 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 79 |
| Conread position: | 382-679 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 390-635 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 390-678 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 399-662 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 404-674 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 459-665 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 471-653 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 484-671 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-678 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 517-684 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 6, 14 |
| Conread position: | 537-683 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 553-678 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 569-678 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 574-678 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.