Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
| Conread position: | 1-677 |
| Cow position: | |
| Alignm length: | 679 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 29 |
| Conread position: | 2-329 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 204 |
| Conread position: | 2-660 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 112 |
| Conread position: | 2-678 |
| Cow position: | |
| Alignm length: | 679 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 2-684 |
| Cow position: | |
| Alignm length: | 684 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 662, 16 |
| Conread position: | 3-679 |
| Cow position: | |
| Alignm length: | 686 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 4-675 |
| Cow position: | |
| Alignm length: | 673 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 119 |
| Conread position: | 4-684 |
| Cow position: | |
| Alignm length: | 682 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 6-221 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-281 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-678 |
| Cow position: | |
| Alignm length: | 675 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 91 |
| Conread position: | 6-679 |
| Cow position: | |
| Alignm length: | 675 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 669, 13 |
| Conread position: | 10-679 |
| Cow position: | |
| Alignm length: | 675 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 200 |
| Conread position: | 11-521 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 13-385 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 13-670 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 13-670 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 13-678 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 106 |
| Conread position: | 13-678 |
| Cow position: | |
| Alignm length: | 669 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 208 |
| Conread position: | 13-678 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 98 |
| Conread position: | 13-678 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 114 |
| Conread position: | 13-678 |
| Cow position: | |
| Alignm length: | 667 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 203 |
| Conread position: | 17-571 |
| Cow position: | |
| Alignm length: | 557 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 115 |
| Conread position: | 17-615 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 375 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 17-675 |
| Cow position: | |
| Alignm length: | 660 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 17-683 |
| Cow position: | |
| Alignm length: | 678 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 18-235 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-344 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 230, 77 |
| Conread position: | 18-514 |
| Cow position: | |
| Alignm length: | 498 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 18-532 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 0 |
| Conread position: | 18-565 |
| Cow position: | |
| Alignm length: | 549 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 18-610 |
| Cow position: | |
| Alignm length: | 595 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 18-670 |
| Cow position: | |
| Alignm length: | 677 |
| Alignm identity: | 421 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 18-674 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 291 |
| Conread position: | 18-674 |
| Cow position: | |
| Alignm length: | 657 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 213 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 199 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 207 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 83 |
| Conread position: | 18-678 |
| Cow position: | |
| Alignm length: | 662 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 354 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 66 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 655, 191 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 666 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 317 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 664 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 24 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 103 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 671 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 67 |
| Conread position: | 18-679 |
| Cow position: | |
| Alignm length: | 663 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 657, 371 |
| Conread position: | 18-683 |
| Cow position: | |
| Alignm length: | 668 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 121 |
| Conread position: | 18-684 |
| Cow position: | |
| Alignm length: | 670 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 488, 49 |
| Conread position: | 19-325 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 19-683 |
| Cow position: | |
| Alignm length: | 666 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 103 |
| Conread position: | 21-388 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 21-570 |
| Cow position: | |
| Alignm length: | 551 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 267 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 652 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 68 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 651 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 645, 532 |
| Conread position: | 30-679 |
| Cow position: | |
| Alignm length: | 650 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 516, 0 |
| Conread position: | 31-542 |
| Cow position: | |
| Alignm length: | 513 |
| Alignm identity: | 316 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 120, 113 |
| Conread position: | 33-684 |
| Cow position: | |
| Alignm length: | 653 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 642, 555 |
| Conread position: | 37-679 |
| Cow position: | |
| Alignm length: | 647 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 24 |
| Conread position: | 46-678 |
| Cow position: | |
| Alignm length: | 640 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 421, 92 |
| Conread position: | 48-465 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 148 |
| Conread position: | 48-673 |
| Cow position: | |
| Alignm length: | 658 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 51-670 |
| Cow position: | |
| Alignm length: | 627 |
| Alignm identity: | 378 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 185, 63 |
| Conread position: | 100-683 |
| Cow position: | |
| Alignm length: | 623 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 31 |
| Conread position: | 106-498 |
| Cow position: | |
| Alignm length: | 394 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 108-433 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 276, 14 |
| Conread position: | 108-506 |
| Cow position: | |
| Alignm length: | 399 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 108-574 |
| Cow position: | |
| Alignm length: | 467 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 113-520 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 142, 117 |
| Conread position: | 126-410 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 205, 41 |
| Conread position: | 134-281 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 134-281 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 146-661 |
| Cow position: | |
| Alignm length: | 518 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 192 |
| Conread position: | 164-660 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 77 |
| Conread position: | 174-542 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 200-514 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 228-678 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 0 |
| Conread position: | 241-684 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 242-678 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 431, 391 |
| Conread position: | 248-428 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 256-496 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 52 |
| Conread position: | 257-669 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 264-679 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 201 |
| Conread position: | 270-589 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 218, 114 |
| Conread position: | 277-678 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 286-679 |
| Cow position: | |
| Alignm length: | 395 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 104 |
| Conread position: | 296-684 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 326, 52 |
| Conread position: | 299-684 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 315-678 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-658 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 172 |
| Conread position: | 324-658 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 172 |
| Conread position: | 328-678 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 336-678 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 347-684 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 142 |
| Conread position: | 349-637 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 358-684 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 372-678 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 372-684 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 377-683 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 378-684 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 149 |
| Conread position: | 387-678 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-678 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 460-683 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 465-682 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 486-678 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 495-684 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 102, 38 |
| Conread position: | 502-678 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 550-684 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 550-684 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 553-675 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.