Cow genome map
Conread name: | Ss1.1-Utr1-UTR010062G02.5 |
Conread position: | 1-683 |
Cow position: | chr9:39992407-39993076 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 465 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 50 |
Conread position: | 2-630 |
Cow position: | chr9:1252486-1251867 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 19 |
Conread position: | 2-632 |
Cow position: | chr9:2051940-2052558 (view UCSC Genome Browser custom track) |
Alignm length: | 644 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 94 |
Conread position: | 3-672 |
Cow position: | chr9:59443336-59444000 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 138 |
Conread position: | 3-683 |
Cow position: | chr9:59174676-59173998 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 240 |
Conread position: | 4-684 |
Cow position: | chr9:3938303-3937663 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 25 |
Conread position: | 6-236 |
Cow position: | chr9:12401733-12401959 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 6-261 |
Cow position: | chr9:50789058-50789306 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 183 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 37, 11 |
Conread position: | 6-281 |
Cow position: | chr9:31776437-31776707 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 187 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 24, 38 |
Conread position: | 6-336 |
Cow position: | chr9:34107234-34106905 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 222 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 116, 242 |
Conread position: | 6-435 |
Cow position: | chr9:26712832-26712414 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 284 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 317, 208 |
Conread position: | 6-645 |
Cow position: | chr9:37163324-37162683 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 225 |
Conread position: | 6-678 |
Cow position: | chr9:781314-780648 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 11 |
Conread position: | 6-678 |
Cow position: | chr9:1076710-1076041 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 488, 11 |
Conread position: | 6-678 |
Cow position: | chr9:1996427-1995758 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 12 |
Conread position: | 6-679 |
Cow position: | chr9:6051554-6050890 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 52 |
Conread position: | 6-679 |
Cow position: | chr9:10321310-10321966 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 442, 14 |
Conread position: | 7-661 |
Cow position: | chr9:4984267-4984911 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 11 |
Conread position: | 8-525 |
Cow position: | chr9:2202708-2203201 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 336 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 265, 22 |
Conread position: | 8-684 |
Cow position: | chr9:35657458-35658107 (view UCSC Genome Browser custom track) |
Alignm length: | 681 |
Alignm identity: | 453 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 13 |
Conread position: | 11-658 |
Cow position: | chr9:793015-792377 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 43 |
Conread position: | 11-678 |
Cow position: | chr9:3155533-3156179 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 121 |
Conread position: | 11-678 |
Cow position: | chr9:15072004-15072670 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 412 |
Conread position: | 11-678 |
Cow position: | chr9:28626539-28625885 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 121 |
Conread position: | 11-678 |
Cow position: | chr9:31020295-31020978 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 303 |
Conread position: | 12-215 |
Cow position: | chr9:651601-651393 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 121, 6 |
Conread position: | 12-434 |
Cow position: | chr9:22650646-22651057 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 193 |
Conread position: | 13-145 |
Cow position: | chr9:8969552-8969419 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 13-238 |
Cow position: | chr9:3585794-3586019 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 169 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 5, 119 |
Conread position: | 13-339 |
Cow position: | chr9:18836278-18836596 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 218 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 5, 18 |
Conread position: | 13-393 |
Cow position: | chr9:1294325-1293944 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 154 |
Conread position: | 13-460 |
Cow position: | chr9:54360098-54360538 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 22 |
Conread position: | 13-548 |
Cow position: | chr9:2199603-2200133 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 0 |
Conread position: | 13-630 |
Cow position: | chr9:55616845-55617438 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 101 |
Conread position: | 13-665 |
Cow position: | chr9:3567362-3566709 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 404 |
Conread position: | 13-678 |
Cow position: | chr9:6757062-6757721 (view UCSC Genome Browser custom track) |
Alignm length: | 672 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 58 |
Conread position: | 13-684 |
Cow position: | chr9:26002624-26001991 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 426 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 5, 68 |
Conread position: | 16-678 |
Cow position: | chr9:131709-131033 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 28 |
Conread position: | 16-679 |
Cow position: | chr9:59483174-59482514 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 504, 190 |
Conread position: | 17-376 |
Cow position: | chr9:830055-829705 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 17-530 |
Cow position: | chr9:831929-831427 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 17-575 |
Cow position: | chr9:3868004-3867462 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 116 |
Conread position: | 17-678 |
Cow position: | chr9:10314877-10315523 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 32 |
Conread position: | 17-678 |
Cow position: | chr9:37130045-37129389 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 83 |
Conread position: | 18-173 |
Cow position: | chr9:10855696-10855852 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 112 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 18-259 |
Cow position: | chr9:3006775-3006536 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 169 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 231, 95 |
Conread position: | 18-259 |
Cow position: | chr9:33834776-33834535 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 180 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 25, 29 |
Conread position: | 18-276 |
Cow position: | chr9:60651965-60651709 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 18-292 |
Cow position: | chr9:18510227-18509953 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 18-345 |
Cow position: | chr9:2488466-2488148 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 77 |
Conread position: | 18-381 |
Cow position: | chr9:418034-417670 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 327, 344 |
Conread position: | 18-388 |
Cow position: | chr9:51183211-51182835 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 187 |
Conread position: | 18-388 |
Cow position: | chr9:59510098-59510478 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 251 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 18-499 |
Cow position: | chr9:6831047-6830580 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 191 |
Conread position: | 18-580 |
Cow position: | chr9:46626302-46625741 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 367, 0 |
Conread position: | 18-615 |
Cow position: | chr9:4672104-4672700 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 579, 0 |
Conread position: | 18-658 |
Cow position: | chr9:27034206-27034836 (view UCSC Genome Browser custom track) |
Alignm length: | 641 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 18-672 |
Cow position: | chr9:3548673-3548023 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 44 |
Conread position: | 18-678 |
Cow position: | chr9:163993-163347 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 29 |
Conread position: | 18-678 |
Cow position: | chr9:17064890-17064227 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 476, 60 |
Conread position: | 18-678 |
Cow position: | chr9:25483369-25484029 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 567 |
Conread position: | 18-678 |
Cow position: | chr9:25755706-25755067 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 18-678 |
Cow position: | chr9:27933591-27934245 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 490, 0 |
Conread position: | 18-678 |
Cow position: | chr9:28677472-28678129 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 97 |
Conread position: | 18-678 |
Cow position: | chr9:31194670-31194010 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 349 |
Conread position: | 18-678 |
Cow position: | chr9:34243101-34242441 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 392, 515 |
Conread position: | 18-678 |
Cow position: | chr9:36724000-36724658 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 29 |
Conread position: | 18-679 |
Cow position: | chr9:2170555-2171215 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 142 |
Conread position: | 18-679 |
Cow position: | chr9:7062609-7061934 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 0 |
Conread position: | 18-679 |
Cow position: | chr9:16175265-16175925 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 657, 182 |
Conread position: | 18-679 |
Cow position: | chr9:47001706-47002347 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 26 |
Conread position: | 18-679 |
Cow position: | chr9:59535596-59536253 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 487, 164 |
Conread position: | 18-679 |
Cow position: | chr9:60278525-60277864 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 657, 511 |
Conread position: | 18-684 |
Cow position: | chr9:16267858-16268534 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 25 |
Conread position: | 18-684 |
Cow position: | chr9:37971710-37971047 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 657, 406 |
Conread position: | 18-684 |
Cow position: | chr9:42309180-42309846 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 657, 251 |
Conread position: | 18-684 |
Cow position: | chr9:42568370-42569034 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 333, 191 |
Conread position: | 19-678 |
Cow position: | chr9:2185454-2186122 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 155 |
Conread position: | 19-678 |
Cow position: | chr9:30671868-30672524 (view UCSC Genome Browser custom track) |
Alignm length: | 660 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 290, 0 |
Conread position: | 20-620 |
Cow position: | chr9:223039-222449 (view UCSC Genome Browser custom track) |
Alignm length: | 606 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 417, 75 |
Conread position: | 20-683 |
Cow position: | chr9:2500796-2500133 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 209 |
Conread position: | 21-679 |
Cow position: | chr9:59456098-59455440 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 483, 9 |
Conread position: | 22-430 |
Cow position: | chr9:1979449-1979851 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 8 |
Conread position: | 23-429 |
Cow position: | chr9:9577106-9577510 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 271 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 8, 156 |
Conread position: | 26-521 |
Cow position: | chr9:870534-870047 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 316 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 5, 168 |
Conread position: | 30-376 |
Cow position: | chr9:32968249-32968596 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 201 |
Conread position: | 30-390 |
Cow position: | chr9:22702344-22701983 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 235 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 94, 154 |
Conread position: | 30-493 |
Cow position: | chr9:7002063-7002524 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 0 |
Conread position: | 30-519 |
Cow position: | chr9:15984000-15984478 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 316 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 46, 59 |
Conread position: | 30-625 |
Cow position: | chr9:28021056-28021654 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 132 |
Conread position: | 30-665 |
Cow position: | chr9:9012617-9013250 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 255 |
Conread position: | 30-678 |
Cow position: | chr9:45872863-45873505 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 0 |
Conread position: | 30-679 |
Cow position: | chr9:5003522-5004157 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 645, 239 |
Conread position: | 30-679 |
Cow position: | chr9:29629238-29628589 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 645, 572 |
Conread position: | 30-679 |
Cow position: | chr9:31807049-31807691 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 645, 179 |
Conread position: | 33-590 |
Cow position: | chr9:29028717-29028158 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 536, 0 |
Conread position: | 40-486 |
Cow position: | chr9:52290159-52290599 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 290 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 85, 193 |
Conread position: | 48-366 |
Cow position: | chr9:2065682-2065367 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 218 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 74, 87 |
Conread position: | 49-472 |
Cow position: | chr9:20310187-20309788 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 49-684 |
Cow position: | chr9:2800990-2800394 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 409 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 101, 77 |
Conread position: | 49-684 |
Cow position: | chr9:3024641-3025266 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 71 |
Conread position: | 50-666 |
Cow position: | chr9:20943260-20943854 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 384 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 361, 9 |
Conread position: | 50-684 |
Cow position: | chr9:4532020-4532654 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 343 |
Conread position: | 51-670 |
Cow position: | chr9:9331188-9330580 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 378 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 95, 13 |
Conread position: | 52-682 |
Cow position: | chr9:64158660-64159278 (view UCSC Genome Browser custom track) |
Alignm length: | 639 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 43 |
Conread position: | 53-527 |
Cow position: | chr9:23409754-23410210 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 312 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 68, 79 |
Conread position: | 72-682 |
Cow position: | chr9:3725830-3726441 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 372, 315 |
Conread position: | 78-406 |
Cow position: | chr9:2697378-2697047 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 295 |
Conread position: | 100-419 |
Cow position: | chr9:13219899-13220222 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 101-609 |
Cow position: | chr9:43215424-43214914 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 314 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 14, 171 |
Conread position: | 110-652 |
Cow position: | chr9:52570256-52570780 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 113-683 |
Cow position: | chr9:5424588-5424023 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 62 |
Conread position: | 125-681 |
Cow position: | chr9:12845932-12845392 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 16 |
Conread position: | 126-684 |
Cow position: | chr9:64118432-64118980 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 205 |
Conread position: | 147-476 |
Cow position: | chr9:8969297-8968968 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 62 |
Conread position: | 147-678 |
Cow position: | chr9:25023675-25023145 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 148-684 |
Cow position: | chr9:3356345-3355830 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 39 |
Conread position: | 149-678 |
Cow position: | chr9:9055438-9054909 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 176-679 |
Cow position: | chr9:6111319-6110841 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 191-678 |
Cow position: | chr9:3542480-3542963 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 0 |
Conread position: | 218-558 |
Cow position: | chr9:59425382-59425712 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 230 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 173, 91 |
Conread position: | 218-678 |
Cow position: | chr9:37064099-37063647 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 169 |
Conread position: | 228-678 |
Cow position: | chr9:30826388-30826838 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 229-683 |
Cow position: | chr9:3006537-3006084 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 241-678 |
Cow position: | chr9:3586075-3586524 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 229 |
Conread position: | 248-683 |
Cow position: | chr9:34992110-34992554 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 61 |
Conread position: | 258-684 |
Cow position: | chr9:3578733-3578339 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 283 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 261-678 |
Cow position: | chr9:50789417-50789834 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 248 |
Conread position: | 270-639 |
Cow position: | chr9:4280212-4280573 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 8 |
Conread position: | 275-682 |
Cow position: | chr9:13477457-13477062 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 140 |
Conread position: | 319-631 |
Cow position: | chr9:2001605-2001301 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 71 |
Conread position: | 323-537 |
Cow position: | chr9:417764-417549 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 144 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 82, 38 |
Conread position: | 335-684 |
Cow position: | chr9:18836823-18837173 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 144 |
Conread position: | 347-670 |
Cow position: | chr9:59510615-59510939 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 212 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 18, 86 |
Conread position: | 358-676 |
Cow position: | chr9:6973964-6974283 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 227 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 55, 48 |
Conread position: | 363-527 |
Cow position: | chr9:2064834-2064671 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 363-658 |
Cow position: | chr9:7012176-7012456 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 201 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 177, 24 |
Conread position: | 369-679 |
Cow position: | chr9:32968815-32969125 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 229 |
Conread position: | 372-530 |
Cow position: | chr9:829372-829216 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 373-684 |
Cow position: | chr9:51182343-51182032 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 378-683 |
Cow position: | chr9:1979835-1980141 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 297, 0 |
Conread position: | 378-683 |
Cow position: | chr9:12120431-12120745 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 211 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 124, 45 |
Conread position: | 378-684 |
Cow position: | chr9:62738021-62737724 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 198 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 32, 16 |
Conread position: | 384-614 |
Cow position: | chr9:22410250-22410023 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 392-662 |
Cow position: | chr9:43662830-43663085 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 83, 149 |
Conread position: | 392-684 |
Cow position: | chr9:1635422-1635703 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 203 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 27, 103 |
Conread position: | 399-670 |
Cow position: | chr9:3394107-3393841 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 191 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 215, 175 |
Conread position: | 409-602 |
Cow position: | chr9:34719857-34720053 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 155 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 411-604 |
Cow position: | chr9:2475179-2475369 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 141 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 413-678 |
Cow position: | chr9:40191785-40191520 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 425-677 |
Cow position: | chr9:26710578-26710337 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 171 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 237, 59 |
Conread position: | 432-640 |
Cow position: | chr9:18067309-18067101 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 432-678 |
Cow position: | chr9:54361346-54361587 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 435-684 |
Cow position: | chr9:64018545-64018297 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 439-684 |
Cow position: | chr9:37095111-37095357 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 440-678 |
Cow position: | chr9:15683855-15684085 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 174 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 79, 12 |
Conread position: | 445-684 |
Cow position: | chr9:39040497-39040728 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 22, 34 |
Conread position: | 477-679 |
Cow position: | chr9:22653521-22653724 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 161 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 0 |
Conread position: | 477-684 |
Cow position: | chr9:44817814-44818021 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 480-678 |
Cow position: | chr9:49177869-49177671 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 164 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 485-684 |
Cow position: | chr9:20309568-20309369 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 161 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 60 |
Conread position: | 495-679 |
Cow position: | chr9:6830527-6830351 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 180, 118 |
Conread position: | 497-678 |
Cow position: | chr9:31064408-31064589 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 149 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 503-678 |
Cow position: | chr9:8968968-8968801 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 509-678 |
Cow position: | chr9:2488144-2487974 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 138 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 519-683 |
Cow position: | chr9:18509806-18509641 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 520-665 |
Cow position: | chr9:7002519-7002664 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 522-678 |
Cow position: | chr9:60651712-60651556 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 93 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 539-684 |
Cow position: | chr9:3803059-3803204 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.