Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR010068A05.5
        

               Conread position:
               1-142
               

               Cow position:
               chr29:32606746-32606605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               102, 87
               

               Conread position:
               137-688
               

               Cow position:
               chr29:34612672-34613227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               691-864
               

               Cow position:
               chr29:34613615-34613788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               864-959
               

               Cow position:
               chr29:34614392-34614487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1084-1266
               

               Cow position:
               chr29:34616455-34616637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1269-1411
               

               Cow position:
               chr29:34616749-34616891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1494-1989
               

               Cow position:
               chr29:34618357-34618860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 425
               
Show alignments to all cow chromosomes.