Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR010068B03.5.62
        

               Conread position:
               1-258
               

               Cow position:
               chr7:23253360-23253617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-380
               

               Cow position:
               chr7:23495861-23495732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               370-491
               

               Cow position:
               chr7:23492812-23492691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-661
               

               Cow position:
               chr7:23489227-23489124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-757
               

               Cow position:
               chr7:23485268-23485171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               757-829
               

               Cow position:
               chr7:23483326-23483254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               73
               

               Alignm identity:
               70
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               907-1022
               

               Cow position:
               chr7:23480374-23480259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1021-1147
               

               Cow position:
               chr7:23479593-23479467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1145-1233
               

               Cow position:
               chr7:23478861-23478773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               80
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1234-1354
               

               Cow position:
               chr7:23476220-23476099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               1339-1432
               

               Cow position:
               chr7:23470673-23470580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1430-1956
               

               Cow position:
               chr7:23467221-23466720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 46
               
Show alignments to all cow chromosomes.