Cow genome map
| Conread name: | Ss1.1-Utr1-UTR010076A05.5.5 |
| Conread position: | 1-156 |
| Cow position: | chr23:21263003-21263154 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-159 |
| Cow position: | chr23:21236051-21236209 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 133 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-156 |
| Cow position: | chr23:22948008-22948151 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 8-157 |
| Cow position: | chr23:21278710-21278856 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 15-156 |
| Cow position: | chr23:5385292-5385432 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 154-395 |
| Cow position: | chr23:5449025-5448784 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-436 |
| Cow position: | chr23:5390957-5391241 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 233 |
| Conread position: | 154-439 |
| Cow position: | chr23:21283947-21284235 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 157-435 |
| Cow position: | chr23:22932422-22932700 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 163-434 |
| Cow position: | chr23:5464290-5464019 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 198, 190 |
| Conread position: | 186-435 |
| Cow position: | chr23:21242372-21242621 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 428-712 |
| Cow position: | chr23:5398918-5399202 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-710 |
| Cow position: | chr23:5446513-5446235 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-712 |
| Cow position: | chr23:21267650-21267923 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 432-712 |
| Cow position: | chr23:22907855-22908132 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 432-728 |
| Cow position: | chr23:21244789-21245086 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 432-728 |
| Cow position: | chr23:22934740-22935037 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 432-728 |
| Cow position: | chr23:22957047-22957344 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 0 |
| Conread position: | 436-712 |
| Cow position: | chr23:5463573-5463296 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 712-823 |
| Cow position: | chr23:21245812-21245923 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 712-823 |
| Cow position: | chr23:21268654-21268765 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 712-823 |
| Cow position: | chr23:22908834-22908945 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 712-823 |
| Cow position: | chr23:22958043-22958154 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 714-823 |
| Cow position: | chr23:22936840-22936949 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.