Cow genome map

Conread name: Ss1.1-Utr1-UTR01A020092.5

Conread position: 1-329
Cow position: chr1:62806046-62805707 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 1-506
Cow position: chr1:55775914-55776413 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 43

Conread position: 1-524
Cow position: chr1:33550683-33551212 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-545
Cow position: chr1:18880625-18880077 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 46

Conread position: 1-552
Cow position: chr1:49974431-49973868 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-555
Cow position: chr1:88130518-88131096 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 1-557
Cow position: chr1:97226940-97226387 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 43

Conread position: 1-561
Cow position: chr1:86699458-86698886 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 1-567
Cow position: chr1:25180271-25179696 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-567
Cow position: chr1:56194171-56193598 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-567
Cow position: chr1:58335596-58336170 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-567
Cow position: chr1:69402752-69403315 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 1-567
Cow position: chr1:72187111-72186545 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 45

Conread position: 1-567
Cow position: chr1:79457207-79456637 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-567
Cow position: chr1:85781018-85780445 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-588
Cow position: chr1:57567710-57568308 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 2-359
Cow position: chr1:82407579-82407217 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 2-388
Cow position: chr1:86608962-86609346 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 42

Conread position: 2-586
Cow position: chr1:57656319-57656897 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 47

Conread position: 4-317
Cow position: chr1:40513734-40513415 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 41

Conread position: 6-342
Cow position: chr1:69922698-69922354 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 6-366
Cow position: chr1:29950542-29950185 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 38

Conread position: 6-537
Cow position: chr1:68607783-68607235 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 6-561
Cow position: chr1:8824827-8825381 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 6-567
Cow position: chr1:62244881-62244312 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 24

Conread position: 6-609
Cow position: chr1:54366052-54365446 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 13-222
Cow position: chr1:55323747-55323537 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 22

Conread position: 13-256
Cow position: chr1:13253659-13253418 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 66, 26

Conread position: 13-257
Cow position: chr1:5501747-5501996 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 30

Conread position: 13-260
Cow position: chr1:76703596-76703355 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 13-445
Cow position: chr1:98783826-98784265 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 30

Conread position: 13-458
Cow position: chr1:25549835-25550282 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 13-516
Cow position: chr1:89740471-89739983 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 32

Conread position: 13-538
Cow position: chr1:42290164-42290691 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 13-539
Cow position: chr1:18244617-18244075 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 31

Conread position: 13-539
Cow position: chr1:34689115-34689650 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 13-552
Cow position: chr1:3386234-3385698 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 13-552
Cow position: chr1:79336032-79335484 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-552
Cow position: chr1:100597610-100597051 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-555
Cow position: chr1:22000185-21999632 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 13-555
Cow position: chr1:93854292-93854846 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-557
Cow position: chr1:89770909-89770360 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 13-567
Cow position: chr1:28872849-28873409 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-567
Cow position: chr1:42736229-42736787 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-567
Cow position: chr1:56144558-56144002 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-567
Cow position: chr1:57367360-57366797 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-567
Cow position: chr1:72981039-72981602 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-567
Cow position: chr1:76545768-76545203 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-567
Cow position: chr1:76623173-76622622 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-567
Cow position: chr1:102435256-102434704 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 26

Conread position: 13-568
Cow position: chr1:76752878-76752316 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 33

Conread position: 13-588
Cow position: chr1:63606011-63605425 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-588
Cow position: chr1:102549005-102549591 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 24

Conread position: 13-597
Cow position: chr1:31366306-31365710 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 33

Conread position: 13-610
Cow position: chr1:30027769-30027164 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 14-174
Cow position: chr1:87449726-87449891 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 31

Conread position: 14-211
Cow position: chr1:31396189-31396388 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 29

Conread position: 14-213
Cow position: chr1:43019898-43020100 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 33

Conread position: 14-286
Cow position: chr1:6708318-6708042 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 31

Conread position: 14-412
Cow position: chr1:79920954-79920544 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-545
Cow position: chr1:8554101-8554644 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 14-545
Cow position: chr1:11292331-11291790 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-545
Cow position: chr1:39543544-39544085 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 14-545
Cow position: chr1:62925386-62925929 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 14-545
Cow position: chr1:82564277-82564819 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-558
Cow position: chr1:40684917-40684363 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 14-753
Cow position: chr1:22864145-22863401 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 186
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 29

Conread position: 15-259
Cow position: chr1:89809846-89809599 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 15-326
Cow position: chr1:17942037-17941715 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 30

Conread position: 15-346
Cow position: chr1:59674263-59674594 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 15-474
Cow position: chr1:33895453-33895925 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-511
Cow position: chr1:55276712-55276203 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-528
Cow position: chr1:56489613-56490139 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-537
Cow position: chr1:33851053-33851585 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-538
Cow position: chr1:71562801-71562265 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-538
Cow position: chr1:87244573-87245119 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 15-538
Cow position: chr1:89899927-89899397 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 15-538
Cow position: chr1:91718860-91718330 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 43

Conread position: 15-538
Cow position: chr1:97123607-97124116 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 15-538
Cow position: chr1:99349244-99348729 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 15-545
Cow position: chr1:17012962-17012423 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr1:17036784-17036241 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-545
Cow position: chr1:20828663-20829205 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr1:56163103-56163642 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 15-545
Cow position: chr1:59210360-59209823 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 32

Conread position: 15-545
Cow position: chr1:61308776-61309318 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-545
Cow position: chr1:63501234-63501767 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 15-545
Cow position: chr1:67835364-67834825 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr1:69766239-69766778 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr1:85791466-85792002 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 24

Conread position: 15-545
Cow position: chr1:86548357-86547819 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-545
Cow position: chr1:89425364-89425889 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr1:91898774-91899312 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 334

Conread position: 15-552
Cow position: chr1:82918884-82918342 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 32

Conread position: 15-557
Cow position: chr1:13645505-13646036 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 30

Conread position: 15-557
Cow position: chr1:28801652-28801076 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 15-557
Cow position: chr1:72656756-72657311 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 15-557
Cow position: chr1:101149617-101150157 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 28

Conread position: 15-558
Cow position: chr1:62854053-62853512 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 30

Conread position: 15-559
Cow position: chr1:101858206-101857657 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 15-567
Cow position: chr1:1461553-1460998 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 15-567
Cow position: chr1:33711834-33712398 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 33

Conread position: 15-567
Cow position: chr1:40307841-40308392 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 30

Conread position: 15-567
Cow position: chr1:52233326-52232779 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 30

Conread position: 15-567
Cow position: chr1:69536683-69537233 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 160

Conread position: 15-568
Cow position: chr1:45097482-45098033 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 15-572
Cow position: chr1:56722929-56723500 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-588
Cow position: chr1:87207637-87207072 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 16-533
Cow position: chr1:67286265-67286789 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 16-545
Cow position: chr1:40053130-40053671 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 16-545
Cow position: chr1:80359391-80358865 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 27

Conread position: 16-552
Cow position: chr1:13879909-13880443 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 31

Conread position: 17-545
Cow position: chr1:82652413-82652969 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 18-169
Cow position: chr1:89478823-89478969 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 18-300
Cow position: chr1:32361336-32361050 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 29

Conread position: 18-486
Cow position: chr1:69287780-69287313 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 28

Conread position: 18-557
Cow position: chr1:38414585-38415122 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 18-568
Cow position: chr1:18406413-18405859 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 26

Conread position: 18-586
Cow position: chr1:88635152-88635726 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 18-599
Cow position: chr1:72136420-72137014 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 18-604
Cow position: chr1:98661519-98660935 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 102

Conread position: 18-610
Cow position: chr1:25887365-25886778 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 20

Conread position: 19-251
Cow position: chr1:38387858-38387633 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 216, 26

Conread position: 19-496
Cow position: chr1:27306191-27305735 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 297
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 198, 20

Conread position: 20-539
Cow position: chr1:80556270-80555774 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 335
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 23

Conread position: 21-545
Cow position: chr1:21087197-21087729 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 24-234
Cow position: chr1:85881525-85881741 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 21

Conread position: 24-546
Cow position: chr1:84987159-84986637 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 337
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 249, 19

Conread position: 26-560
Cow position: chr1:52359491-52358951 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 27-347
Cow position: chr1:87969137-87969467 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 16

Conread position: 27-531
Cow position: chr1:99374759-99375253 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 334
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 17

Conread position: 27-588
Cow position: chr1:72080558-72081133 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 40-492
Cow position: chr1:21356811-21356379 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 300
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 113

Conread position: 40-537
Cow position: chr1:18014389-18013880 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 211

Conread position: 40-537
Cow position: chr1:78289679-78290172 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 222

Conread position: 40-558
Cow position: chr1:53045983-53045461 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 349
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 56, 227

Conread position: 40-567
Cow position: chr1:91893313-91892788 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 85

Conread position: 40-610
Cow position: chr1:79109095-79109653 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 104

Conread position: 41-545
Cow position: chr1:30283737-30283227 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 38

Conread position: 43-539
Cow position: chr1:38385480-38384994 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 333
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 61

Conread position: 58-390
Cow position: chr1:77163597-77163924 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 126

Conread position: 58-537
Cow position: chr1:77112622-77112144 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 58-566
Cow position: chr1:52918800-52918292 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 58

Conread position: 70-539
Cow position: chr1:39482147-39481673 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 213

Conread position: 71-250
Cow position: chr1:79884997-79884816 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 71-609
Cow position: chr1:73009635-73010162 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 346
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 56

Conread position: 72-278
Cow position: chr1:21541396-21541600 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 193, 104

Conread position: 72-286
Cow position: chr1:40953546-40953751 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 193, 77

Conread position: 72-410
Cow position: chr1:15347749-15347405 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 72-462
Cow position: chr1:23050676-23051065 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 113

Conread position: 72-499
Cow position: chr1:72942662-72943088 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 281
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 116

Conread position: 72-511
Cow position: chr1:99910787-99911240 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 262

Conread position: 72-523
Cow position: chr1:66686701-66686244 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 310
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 90, 84

Conread position: 72-539
Cow position: chr1:99021119-99020653 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 307
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 103

Conread position: 72-545
Cow position: chr1:28710752-28711232 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 72-546
Cow position: chr1:61738666-61738203 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 97

Conread position: 72-552
Cow position: chr1:78919964-78920424 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 305
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 220, 74

Conread position: 72-558
Cow position: chr1:5318596-5319071 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 150

Conread position: 72-566
Cow position: chr1:79637093-79636598 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 104

Conread position: 72-572
Cow position: chr1:19992841-19992350 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 61

Conread position: 74-384
Cow position: chr1:85533568-85533261 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 70

Conread position: 74-539
Cow position: chr1:82355566-82356024 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 307
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 67, 154

Conread position: 74-545
Cow position: chr1:13450048-13450522 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 92

Conread position: 75-474
Cow position: chr1:33388136-33388537 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 181

Conread position: 75-559
Cow position: chr1:11863397-11862932 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 69

Conread position: 76-483
Cow position: chr1:21476238-21476645 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 78

Conread position: 77-496
Cow position: chr1:15025739-15026152 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 272
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 194, 17

Conread position: 77-521
Cow position: chr1:12062357-12061905 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 77-558
Cow position: chr1:37419906-37419443 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 43

Conread position: 81-539
Cow position: chr1:59644699-59645145 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 292
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 78

Conread position: 93-560
Cow position: chr1:36919764-36920252 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 306
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 87, 83

Conread position: 94-511
Cow position: chr1:48245669-48246095 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 95-537
Cow position: chr1:11900786-11900345 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 276
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 75

Conread position: 107-567
Cow position: chr1:73071186-73070721 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 454

Conread position: 122-252
Cow position: chr1:28722698-28722830 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 106

Conread position: 141-545
Cow position: chr1:60339210-60339621 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 142-538
Cow position: chr1:32342169-32341771 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 268

Conread position: 142-557
Cow position: chr1:28722778-28723198 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 165

Conread position: 144-545
Cow position: chr1:29362204-29362612 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 146-466
Cow position: chr1:77117681-77117350 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 149-552
Cow position: chr1:82924265-82923857 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 157-472
Cow position: chr1:20988873-20989198 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 110, 97

Conread position: 157-538
Cow position: chr1:67901997-67901621 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 44

Conread position: 158-516
Cow position: chr1:100075040-100075395 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 81

Conread position: 163-610
Cow position: chr1:46835452-46835907 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 303
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 53

Conread position: 176-552
Cow position: chr1:58884128-58883745 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 177-545
Cow position: chr1:40574156-40574529 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 304

Conread position: 177-587
Cow position: chr1:89479262-89479669 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 204

Conread position: 188-545
Cow position: chr1:87749989-87750336 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 33

Conread position: 196-535
Cow position: chr1:88270635-88270307 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 78, 6

Conread position: 196-567
Cow position: chr1:94659651-94660017 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 19

Conread position: 205-549
Cow position: chr1:31396659-31397008 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 342

Conread position: 213-539
Cow position: chr1:77655684-77656003 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 170, 48

Conread position: 224-609
Cow position: chr1:55323067-55322672 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 228-567
Cow position: chr1:85881995-85882337 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 139

Conread position: 278-456
Cow position: chr1:38387634-38387458 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 159

Conread position: 278-545
Cow position: chr1:82913096-82912828 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 23

Conread position: 278-545
Cow position: chr1:95239417-95239685 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 286-604
Cow position: chr1:78360798-78361117 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 255, 64

Conread position: 288-551
Cow position: chr1:5501991-5502255 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 291-506
Cow position: chr1:40953964-40954178 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 14

Conread position: 293-441
Cow position: chr1:60280450-60280301 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 304-567
Cow position: chr1:17941709-17941453 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 89

Conread position: 312-620
Cow position: chr1:38396310-38396618 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 124

Conread position: 335-609
Cow position: chr1:24650861-24651142 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 73

Conread position: 345-552
Cow position: chr1:69922324-69922116 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 345-604
Cow position: chr1:40513264-40513001 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 131

Conread position: 349-567
Cow position: chr1:65386446-65386663 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 198

Conread position: 351-604
Cow position: chr1:94253040-94253299 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 11

Conread position: 356-536
Cow position: chr1:69060621-69060791 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 49

Conread position: 365-545
Cow position: chr1:9382410-9382232 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 73

Conread position: 367-567
Cow position: chr1:18027632-18027435 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 173, 0

Conread position: 369-539
Cow position: chr1:21720027-21720198 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 376-557
Cow position: chr1:59674595-59674774 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 165

Conread position: 382-558
Cow position: chr1:72039196-72039020 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 384-597
Cow position: chr1:42870088-42869874 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 157, 0

Conread position: 393-539
Cow position: chr1:87516120-87515974 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 126
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 414-567
Cow position: chr1:30534840-30534689 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 417-545
Cow position: chr1:5355314-5355442 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 422-545
Cow position: chr1:57424646-57424523 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.