Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A020092.5 |
| Conread position: | 1-192 |
| Cow position: | chr11:40777310-40777113 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-519 |
| Cow position: | chr11:77729104-77728569 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-538 |
| Cow position: | chr11:54209049-54209582 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 44 |
| Conread position: | 1-555 |
| Cow position: | chr11:29669207-29668644 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr11:10846866-10847439 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr11:11987542-11988104 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr11:19103064-19102489 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr11:24392748-24393315 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr11:26125506-26124934 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 1-567 |
| Cow position: | chr11:28055172-28054602 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr11:43515209-43514635 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr11:58133794-58134384 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr11:71329066-71329641 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 1-568 |
| Cow position: | chr11:37093640-37093062 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 1-588 |
| Cow position: | chr11:12359000-12358407 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 6-538 |
| Cow position: | chr11:87127271-87127808 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 175 |
| Conread position: | 6-567 |
| Cow position: | chr11:4028123-4027567 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 6-567 |
| Cow position: | chr11:23876731-23877300 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 13-246 |
| Cow position: | chr11:7687355-7687589 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 13-254 |
| Cow position: | chr11:31414803-31414560 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 13-262 |
| Cow position: | chr11:76375035-76374792 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 227, 32 |
| Conread position: | 13-298 |
| Cow position: | chr11:77235195-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-359 |
| Cow position: | chr11:28050348-28050004 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 13-431 |
| Cow position: | chr11:44496152-44495732 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 32 |
| Conread position: | 13-483 |
| Cow position: | chr11:10210529-10210048 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 13-502 |
| Cow position: | chr11:9157987-9157499 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-539 |
| Cow position: | chr11:28063124-28063647 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 13-552 |
| Cow position: | chr11:8244156-8244688 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 32 |
| Conread position: | 13-555 |
| Cow position: | chr11:44157799-44157266 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 13-560 |
| Cow position: | chr11:1496633-1496081 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 13-567 |
| Cow position: | chr11:38835983-38835434 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-567 |
| Cow position: | chr11:41171259-41170695 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-567 |
| Cow position: | chr11:72110527-72109968 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-588 |
| Cow position: | chr11:85394375-85393794 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-610 |
| Cow position: | chr11:42428769-42429384 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 128 |
| Conread position: | 14-545 |
| Cow position: | chr11:17108251-17107709 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-545 |
| Cow position: | chr11:20921311-20920768 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 14-545 |
| Cow position: | chr11:36744743-36744203 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 15-286 |
| Cow position: | chr11:9736516-9736239 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-421 |
| Cow position: | chr11:15998334-15998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 15-448 |
| Cow position: | chr11:28073173-28073611 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 146, 31 |
| Conread position: | 15-486 |
| Cow position: | chr11:44861089-44860611 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 15-538 |
| Cow position: | chr11:9659958-9659417 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 15-538 |
| Cow position: | chr11:12351627-12351095 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-538 |
| Cow position: | chr11:37492208-37491676 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 15-545 |
| Cow position: | chr11:3492448-3492988 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr11:15983066-15983601 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 15-545 |
| Cow position: | chr11:19064814-19064272 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-545 |
| Cow position: | chr11:25527017-25527535 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 30 |
| Conread position: | 15-545 |
| Cow position: | chr11:28230313-28229780 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 15-545 |
| Cow position: | chr11:32450303-32450844 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-545 |
| Cow position: | chr11:37477680-37477142 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr11:53288019-53287479 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 15-545 |
| Cow position: | chr11:57628611-57628069 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-545 |
| Cow position: | chr11:67847131-67846594 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-557 |
| Cow position: | chr11:21466512-21467063 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 15-567 |
| Cow position: | chr11:8887714-8887160 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 15-599 |
| Cow position: | chr11:63660146-63659557 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 16-496 |
| Cow position: | chr11:30125808-30125335 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 16-545 |
| Cow position: | chr11:52418828-52419365 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 17-538 |
| Cow position: | chr11:4041623-4041106 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 17-588 |
| Cow position: | chr11:17220774-17220189 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 18-454 |
| Cow position: | chr11:32272264-32271823 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 18-497 |
| Cow position: | chr11:30304688-30305158 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 18-528 |
| Cow position: | chr11:7113040-7113554 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 18-555 |
| Cow position: | chr11:8262257-8261713 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 18-558 |
| Cow position: | chr11:29234206-29233674 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 18-572 |
| Cow position: | chr11:44230571-44231116 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 18-603 |
| Cow position: | chr11:33044678-33044085 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 19-537 |
| Cow position: | chr11:34020348-34020860 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 20-226 |
| Cow position: | chr11:17280796-17280593 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 20-252 |
| Cow position: | chr11:11126360-11126592 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 22-567 |
| Cow position: | chr11:4271424-4270864 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 25-545 |
| Cow position: | chr11:67449943-67450475 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 27-551 |
| Cow position: | chr11:9607127-9606597 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 46-538 |
| Cow position: | chr11:39833220-39833722 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 47-545 |
| Cow position: | chr11:61401570-61401074 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 210 |
| Conread position: | 49-369 |
| Cow position: | chr11:9581072-9580739 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 329 |
| Conread position: | 49-499 |
| Cow position: | chr11:43731889-43732335 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 30 |
| Conread position: | 59-557 |
| Cow position: | chr11:75919900-75920388 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 71-517 |
| Cow position: | chr11:50029198-50028737 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 304 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 172, 77 |
| Conread position: | 72-343 |
| Cow position: | chr11:32071612-32071877 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 214, 65 |
| Conread position: | 72-401 |
| Cow position: | chr11:81552730-81552401 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 72-520 |
| Cow position: | chr11:42361719-42362148 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 74-386 |
| Cow position: | chr11:44895517-44895204 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 174, 66 |
| Conread position: | 74-388 |
| Cow position: | chr11:10218060-10217750 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 193, 78 |
| Conread position: | 74-502 |
| Cow position: | chr11:14730020-14729589 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 210, 200 |
| Conread position: | 74-506 |
| Cow position: | chr11:26566216-26565783 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 191, 148 |
| Conread position: | 74-556 |
| Cow position: | chr11:45110860-45111354 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 239 |
| Conread position: | 75-380 |
| Cow position: | chr11:49040134-49039836 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 76-361 |
| Cow position: | chr11:35389284-35388995 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 109, 82 |
| Conread position: | 79-604 |
| Cow position: | chr11:36761598-36762122 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 334 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 186, 123 |
| Conread position: | 82-604 |
| Cow position: | chr11:8282586-8283117 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 93 |
| Conread position: | 88-455 |
| Cow position: | chr11:10049638-10050006 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 53 |
| Conread position: | 93-477 |
| Cow position: | chr11:81853104-81852723 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 130 |
| Conread position: | 101-372 |
| Cow position: | chr11:17924916-17924639 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 132, 137 |
| Conread position: | 107-418 |
| Cow position: | chr11:13067478-13067172 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 276, 143 |
| Conread position: | 107-418 |
| Cow position: | chr11:13162526-13162832 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 276, 143 |
| Conread position: | 110-604 |
| Cow position: | chr11:10089871-10090385 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 132-574 |
| Cow position: | chr11:66726023-66726483 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 219 |
| Conread position: | 142-298 |
| Cow position: | chr11:46962849-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 154-545 |
| Cow position: | chr11:5343638-5343240 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 157-538 |
| Cow position: | chr11:37065541-37065148 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 141 |
| Conread position: | 161-383 |
| Cow position: | chr11:62216512-62216289 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 87 |
| Conread position: | 162-387 |
| Cow position: | chr11:65161971-65161745 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 166-487 |
| Cow position: | chr11:9415814-9415511 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 83 |
| Conread position: | 168-494 |
| Cow position: | chr11:32684882-32685211 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 117, 80 |
| Conread position: | 181-545 |
| Cow position: | chr11:64045604-64045975 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 195-488 |
| Cow position: | chr11:47761310-47761023 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 61 |
| Conread position: | 197-504 |
| Cow position: | chr11:40776920-40776606 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 295 |
| Conread position: | 212-517 |
| Cow position: | chr11:67867665-67867364 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 230-471 |
| Cow position: | chr11:31414267-31414023 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 235-545 |
| Cow position: | chr11:73476968-73477285 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 238-443 |
| Cow position: | chr11:7688276-7688484 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 238-524 |
| Cow position: | chr11:52886824-52886547 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 221, 18 |
| Conread position: | 244-472 |
| Cow position: | chr11:3240317-3240549 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 18, 130 |
| Conread position: | 272-593 |
| Cow position: | chr11:17280592-17280277 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 183 |
| Conread position: | 276-539 |
| Cow position: | chr11:48084819-48085081 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 11, 129 |
| Conread position: | 281-537 |
| Cow position: | chr11:8519705-8519958 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 140 |
| Conread position: | 293-511 |
| Cow position: | chr11:9734923-9734705 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 139 |
| Conread position: | 303-512 |
| Cow position: | chr11:18073687-18073472 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 103 |
| Conread position: | 307-545 |
| Cow position: | chr11:38505866-38505628 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 332-560 |
| Cow position: | chr11:4065471-4065235 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 340-555 |
| Cow position: | chr11:12093328-12093545 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 344-545 |
| Cow position: | chr11:33194778-33194576 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 349-521 |
| Cow position: | chr11:77235495-77235668 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 143 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 353-555 |
| Cow position: | chr11:9220336-9220130 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 365-609 |
| Cow position: | chr11:7316669-7316917 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 370-588 |
| Cow position: | chr11:31925969-31926188 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 397-538 |
| Cow position: | chr11:76374371-76374231 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 404-567 |
| Cow position: | chr11:53432230-53432069 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 420-539 |
| Cow position: | chr11:59369460-59369579 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-557 |
| Cow position: | chr11:8267681-8267556 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 440-557 |
| Cow position: | chr11:256315-256201 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.