Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A020092.5 |
| Conread position: | 1-208 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-246 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 1-286 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-357 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-516 |
| Cow position: | |
| Alignm length: | 526 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 1-523 |
| Cow position: | |
| Alignm length: | 537 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 1-537 |
| Cow position: | |
| Alignm length: | 550 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 1-552 |
| Cow position: | |
| Alignm length: | 567 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 1-552 |
| Cow position: | |
| Alignm length: | 565 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 1-561 |
| Cow position: | |
| Alignm length: | 570 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-566 |
| Cow position: | |
| Alignm length: | 579 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 581 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 575 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 577 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 579 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 580 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 585 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 585 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 578 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 1-567 |
| Cow position: | |
| Alignm length: | 580 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-579 |
| Cow position: | |
| Alignm length: | 616 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-588 |
| Cow position: | |
| Alignm length: | 601 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 1-597 |
| Cow position: | |
| Alignm length: | 610 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 42 |
| Conread position: | 1-609 |
| Cow position: | |
| Alignm length: | 630 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 5-538 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 6-276 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 13-335 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 13-374 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 13-408 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 13-537 |
| Cow position: | |
| Alignm length: | 539 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 13-538 |
| Cow position: | |
| Alignm length: | 535 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-538 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-552 |
| Cow position: | |
| Alignm length: | 554 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-555 |
| Cow position: | |
| Alignm length: | 556 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 13-567 |
| Cow position: | |
| Alignm length: | 561 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-567 |
| Cow position: | |
| Alignm length: | 566 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 13-567 |
| Cow position: | |
| Alignm length: | 568 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-604 |
| Cow position: | |
| Alignm length: | 608 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 13-609 |
| Cow position: | |
| Alignm length: | 618 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 13-609 |
| Cow position: | |
| Alignm length: | 613 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 14-377 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 14-526 |
| Cow position: | |
| Alignm length: | 523 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 14-538 |
| Cow position: | |
| Alignm length: | 546 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 14-538 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 15-180 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 15-347 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 15-418 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 15-545 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | |
| Alignm length: | 540 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-557 |
| Cow position: | |
| Alignm length: | 554 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 15-570 |
| Cow position: | |
| Alignm length: | 569 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 16-356 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 16-524 |
| Cow position: | |
| Alignm length: | 522 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 16-552 |
| Cow position: | |
| Alignm length: | 548 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 18-405 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 18-477 |
| Cow position: | |
| Alignm length: | 474 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 18-538 |
| Cow position: | |
| Alignm length: | 529 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 18-538 |
| Cow position: | |
| Alignm length: | 538 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 18-539 |
| Cow position: | |
| Alignm length: | 530 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 18-551 |
| Cow position: | |
| Alignm length: | 543 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 27 |
| Conread position: | 19-538 |
| Cow position: | |
| Alignm length: | 528 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 19-545 |
| Cow position: | |
| Alignm length: | 544 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 21-559 |
| Cow position: | |
| Alignm length: | 552 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 22 |
| Conread position: | 24-528 |
| Cow position: | |
| Alignm length: | 517 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 37-467 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 40-209 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 40-337 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 211 |
| Conread position: | 40-538 |
| Cow position: | |
| Alignm length: | 508 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 191 |
| Conread position: | 46-478 |
| Cow position: | |
| Alignm length: | 452 |
| Alignm identity: | 301 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 66-536 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 71-576 |
| Cow position: | |
| Alignm length: | 514 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 72-438 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 40 |
| Conread position: | 72-441 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 102 |
| Conread position: | 72-478 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 72-538 |
| Cow position: | |
| Alignm length: | 477 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 72-610 |
| Cow position: | |
| Alignm length: | 547 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 18 |
| Conread position: | 74-567 |
| Cow position: | |
| Alignm length: | 500 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 146 |
| Conread position: | 79-372 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 82-502 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 62 |
| Conread position: | 82-610 |
| Cow position: | |
| Alignm length: | 542 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 84-479 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 8 |
| Conread position: | 93-252 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 94-567 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 467 |
| Conread position: | 156-538 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 111, 97 |
| Conread position: | 161-355 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 165-604 |
| Cow position: | |
| Alignm length: | 465 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 334 |
| Conread position: | 185-539 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 189-588 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 158 |
| Conread position: | 212-524 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 214-538 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 53, 98 |
| Conread position: | 224-537 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 187 |
| Conread position: | 278-545 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 286-608 |
| Cow position: | |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 222 |
| Conread position: | 287-537 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 172, 165 |
| Conread position: | 287-604 |
| Cow position: | |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 293-539 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 111 |
| Conread position: | 306-545 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 155 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 306-596 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 330-551 |
| Cow position: | |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 336-539 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 336-603 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 101 |
| Conread position: | 353-605 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 121, 247 |
| Conread position: | 403-604 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 138, 76 |
| Conread position: | 410-523 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 417-539 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-538 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-609 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 110, 149 |
Show alignments to all cow chromosomes.