Cow genome map

Conread name: Ss1.1-Utr1-UTR01A020092.5

Conread position: 1-203
Cow position: chr2:24921596-24921802 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 42

Conread position: 1-287
Cow position: chr2:25888954-25888664 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 1-537
Cow position: chr2:22077038-22077585 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 45

Conread position: 1-538
Cow position: chr2:5905598-5905065 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 1-552
Cow position: chr2:47810265-47810825 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 1-552
Cow position: chr2:65939197-65938638 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-567
Cow position: chr2:10186972-10186408 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 44

Conread position: 1-567
Cow position: chr2:11159877-11159302 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-567
Cow position: chr2:16899495-16900074 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 43

Conread position: 1-567
Cow position: chr2:42672134-42671563 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-587
Cow position: chr2:10269407-10268816 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-601
Cow position: chr2:20903879-20903302 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 42

Conread position: 1-604
Cow position: chr2:16288505-16289092 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 30

Conread position: 6-383
Cow position: chr2:38589439-38589798 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 276, 33

Conread position: 6-387
Cow position: chr2:976016-975631 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 39

Conread position: 6-588
Cow position: chr2:6960000-6960592 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 37

Conread position: 13-208
Cow position: chr2:36031794-36031609 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 13-209
Cow position: chr2:37790885-37790690 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 158, 30

Conread position: 13-214
Cow position: chr2:51305642-51305440 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 30

Conread position: 13-246
Cow position: chr2:8117514-8117750 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 13-259
Cow position: chr2:45213994-45213743 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-280
Cow position: chr2:12224887-12224611 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 66, 30

Conread position: 13-414
Cow position: chr2:32458745-32458335 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 13-460
Cow position: chr2:54649536-54649102 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 13-480
Cow position: chr2:10733573-10733100 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 13-499
Cow position: chr2:85356505-85356019 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 30

Conread position: 13-529
Cow position: chr2:5871066-5870565 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 13-545
Cow position: chr2:51991268-51990725 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-551
Cow position: chr2:81256068-81256616 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 13-552
Cow position: chr2:19009495-19010044 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-555
Cow position: chr2:50983966-50983414 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 13-556
Cow position: chr2:28650963-28650415 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 13-557
Cow position: chr2:32654613-32655154 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 33

Conread position: 13-558
Cow position: chr2:769127-768569 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 13-558
Cow position: chr2:53329013-53329568 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 13-559
Cow position: chr2:50076866-50077415 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 32

Conread position: 13-566
Cow position: chr2:44935817-44935261 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 32

Conread position: 13-567
Cow position: chr2:11969499-11968943 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 26

Conread position: 13-567
Cow position: chr2:13046416-13045881 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 32

Conread position: 13-567
Cow position: chr2:52061931-52062492 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 14-309
Cow position: chr2:5519727-5519419 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-530
Cow position: chr2:14560460-14560970 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 14-538
Cow position: chr2:80956380-80955838 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 33

Conread position: 14-545
Cow position: chr2:9907176-9907718 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 14-545
Cow position: chr2:49471509-49472052 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 33

Conread position: 14-545
Cow position: chr2:57142424-57141881 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-557
Cow position: chr2:44992017-44991482 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 10

Conread position: 14-558
Cow position: chr2:26920959-26921515 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-567
Cow position: chr2:283430-282867 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 29

Conread position: 14-588
Cow position: chr2:72922566-72921986 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 29

Conread position: 14-609
Cow position: chr2:1673384-1672797 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 17

Conread position: 15-212
Cow position: chr2:75251026-75251221 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 67, 30

Conread position: 15-261
Cow position: chr2:80516335-80516569 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 21

Conread position: 15-282
Cow position: chr2:54736887-54737156 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 28

Conread position: 15-289
Cow position: chr2:67421578-67421301 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-306
Cow position: chr2:1491158-1490862 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 30

Conread position: 15-435
Cow position: chr2:26865279-26864860 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-464
Cow position: chr2:24145540-24145993 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 15-534
Cow position: chr2:4405084-4404554 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-538
Cow position: chr2:2413533-2412998 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-538
Cow position: chr2:6772898-6772374 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 16

Conread position: 15-538
Cow position: chr2:41656352-41656880 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 15-538
Cow position: chr2:41685777-41686314 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-538
Cow position: chr2:52615735-52616270 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-542
Cow position: chr2:5481370-5480867 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 28

Conread position: 15-545
Cow position: chr2:212965-212416 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 15-545
Cow position: chr2:2380392-2380912 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 15-545
Cow position: chr2:3325303-3324759 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 43

Conread position: 15-545
Cow position: chr2:16077032-16076491 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 15-545
Cow position: chr2:25031212-25030671 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr2:39420859-39421384 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 32

Conread position: 15-545
Cow position: chr2:44090563-44091106 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr2:47039145-47038609 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 43

Conread position: 15-545
Cow position: chr2:57334468-57335001 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 15-545
Cow position: chr2:59414416-59413875 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 15-556
Cow position: chr2:46945936-46946480 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 15-557
Cow position: chr2:44345979-44346529 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 15-605
Cow position: chr2:52152588-52151994 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 30

Conread position: 16-197
Cow position: chr2:27817041-27817227 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 27

Conread position: 16-447
Cow position: chr2:56438455-56438024 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 16-545
Cow position: chr2:2184992-2184451 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 18-396
Cow position: chr2:3730001-3730382 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 26

Conread position: 18-414
Cow position: chr2:6877761-6878152 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 18-475
Cow position: chr2:67430333-67430779 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 304
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 28

Conread position: 18-484
Cow position: chr2:52655740-52656210 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 27

Conread position: 18-536
Cow position: chr2:42334001-42333495 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 18-538
Cow position: chr2:82166884-82167407 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 27

Conread position: 18-557
Cow position: chr2:10844069-10843536 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 18-565
Cow position: chr2:10712164-10711614 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 237

Conread position: 18-586
Cow position: chr2:34565660-34565078 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 18-597
Cow position: chr2:28621557-28620971 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 18-602
Cow position: chr2:3749176-3749786 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 19-310
Cow position: chr2:32388834-32389127 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 59, 26

Conread position: 19-311
Cow position: chr2:47604528-47604239 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 241, 24

Conread position: 19-334
Cow position: chr2:40245339-40245649 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 24

Conread position: 19-356
Cow position: chr2:67014897-67014557 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 224
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 26

Conread position: 19-557
Cow position: chr2:78741402-78741953 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 24

Conread position: 20-497
Cow position: chr2:202382-201908 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 23

Conread position: 20-572
Cow position: chr2:15580711-15580157 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 17

Conread position: 20-609
Cow position: chr2:2357187-2356597 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 21-510
Cow position: chr2:35352652-35353137 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 22-388
Cow position: chr2:72682861-72682485 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 21

Conread position: 24-347
Cow position: chr2:41149321-41149649 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 11

Conread position: 24-431
Cow position: chr2:20876341-20875948 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 19

Conread position: 24-558
Cow position: chr2:20874879-20874363 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 24-568
Cow position: chr2:26868549-26869095 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 25-581
Cow position: chr2:7901557-7902125 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 27-604
Cow position: chr2:22136630-22136057 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 362
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 29-612
Cow position: chr2:7210983-7211575 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 39-557
Cow position: chr2:44106795-44106295 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 30

Conread position: 40-354
Cow position: chr2:38372130-38372444 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 40-538
Cow position: chr2:78761766-78762268 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 241

Conread position: 41-469
Cow position: chr2:1647450-1647892 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 285
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 87

Conread position: 41-538
Cow position: chr2:2102176-2101672 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 46-398
Cow position: chr2:52680722-52681081 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 58

Conread position: 49-438
Cow position: chr2:52174018-52173628 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 16

Conread position: 49-597
Cow position: chr2:50321596-50322139 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 128

Conread position: 50-363
Cow position: chr2:324519-324199 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 27

Conread position: 54-604
Cow position: chr2:43958927-43959456 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 48

Conread position: 58-500
Cow position: chr2:61130980-61130573 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 109

Conread position: 58-539
Cow position: chr2:45921936-45921463 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 60-374
Cow position: chr2:11725155-11725476 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 165

Conread position: 63-610
Cow position: chr2:75676560-75676039 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 370
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 399, 32

Conread position: 72-261
Cow position: chr2:46465885-46465697 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 0

Conread position: 72-353
Cow position: chr2:782410-782140 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 72-381
Cow position: chr2:47851790-47851490 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 194
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 72-429
Cow position: chr2:46402929-46402578 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 195, 91

Conread position: 72-445
Cow position: chr2:53552501-53552873 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 256
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 143, 40

Conread position: 72-447
Cow position: chr2:226160-225788 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 233
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 200

Conread position: 72-487
Cow position: chr2:4235502-4235904 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 286
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 24

Conread position: 72-498
Cow position: chr2:50402599-50403025 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 114

Conread position: 72-511
Cow position: chr2:10294457-10294909 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 105

Conread position: 72-526
Cow position: chr2:24907777-24907315 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 282
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 99

Conread position: 72-537
Cow position: chr2:176203-175730 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 72-537
Cow position: chr2:13488028-13488484 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 303
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 109, 78

Conread position: 72-538
Cow position: chr2:5814084-5813587 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 54

Conread position: 72-538
Cow position: chr2:36991214-36991684 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 280

Conread position: 72-555
Cow position: chr2:36979706-36980190 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 61

Conread position: 72-566
Cow position: chr2:41172015-41172507 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 54

Conread position: 72-567
Cow position: chr2:28792572-28793077 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 314

Conread position: 73-557
Cow position: chr2:422394-422882 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 265

Conread position: 73-558
Cow position: chr2:49604057-49604531 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 71

Conread position: 74-552
Cow position: chr2:53473830-53473349 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 74-604
Cow position: chr2:63293245-63292694 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 103

Conread position: 75-492
Cow position: chr2:10730226-10729806 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 41

Conread position: 76-483
Cow position: chr2:80586433-80586850 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 267
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 18

Conread position: 77-622
Cow position: chr2:28746803-28747344 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 5

Conread position: 83-363
Cow position: chr2:41146125-41146388 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 73

Conread position: 83-506
Cow position: chr2:5890723-5890304 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 270
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 77

Conread position: 83-557
Cow position: chr2:1490638-1490162 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 462

Conread position: 98-537
Cow position: chr2:290479-290036 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 60

Conread position: 99-454
Cow position: chr2:73191291-73191636 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 171, 77

Conread position: 99-602
Cow position: chr2:28643766-28643266 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 168

Conread position: 99-609
Cow position: chr2:15578222-15577696 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 114-359
Cow position: chr2:34618104-34618351 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 145, 42

Conread position: 131-539
Cow position: chr2:3837596-3837211 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 42

Conread position: 132-566
Cow position: chr2:39621673-39622110 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 112

Conread position: 157-418
Cow position: chr2:29029522-29029780 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 44

Conread position: 158-609
Cow position: chr2:36054223-36053777 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 55

Conread position: 161-603
Cow position: chr2:14821926-14822371 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 14

Conread position: 163-575
Cow position: chr2:72109110-72108712 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 72

Conread position: 169-596
Cow position: chr2:74391694-74391242 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 304
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 100

Conread position: 176-346
Cow position: chr2:3837721-3837897 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 47

Conread position: 188-609
Cow position: chr2:6755879-6755445 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 271
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 274

Conread position: 190-538
Cow position: chr2:2363641-2363982 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 80

Conread position: 202-609
Cow position: chr2:36031283-36030862 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 212-567
Cow position: chr2:24921864-24922225 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 350

Conread position: 239-429
Cow position: chr2:8118055-8118252 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 73

Conread position: 241-524
Cow position: chr2:46465633-46465348 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 111

Conread position: 244-545
Cow position: chr2:10612130-10611821 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 246-428
Cow position: chr2:15062815-15062634 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 162

Conread position: 277-555
Cow position: chr2:45213752-45213470 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 12

Conread position: 278-552
Cow position: chr2:80516608-80516872 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 94, 23

Conread position: 278-598
Cow position: chr2:51305198-51304877 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 171

Conread position: 288-574
Cow position: chr2:52350351-52350633 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 105, 128

Conread position: 293-458
Cow position: chr2:6638689-6638855 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 0

Conread position: 293-595
Cow position: chr2:59963676-59963369 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 12

Conread position: 296-534
Cow position: chr2:54737065-54737302 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 152
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 89, 76

Conread position: 300-558
Cow position: chr2:47603895-47603648 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 110

Conread position: 304-539
Cow position: chr2:45968789-45968559 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 101

Conread position: 304-609
Cow position: chr2:32389348-32389661 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 145

Conread position: 310-552
Cow position: chr2:4926607-4926364 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 311-545
Cow position: chr2:67419729-67419494 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 318-545
Cow position: chr2:5474093-5474321 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 318-580
Cow position: chr2:28616628-28616362 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 157

Conread position: 321-539
Cow position: chr2:5485673-5485453 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 192

Conread position: 323-538
Cow position: chr2:2088591-2088375 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 386-545
Cow position: chr2:49590047-49590206 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 398-539
Cow position: chr2:41149650-41149788 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 404-591
Cow position: chr2:85068895-85068714 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 424-545
Cow position: chr2:57588381-57588501 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.