• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Utr1-UTR01A020092.5
        

               
Conread position:
               
1-239
               

               
Cow position:
               
chr3:47273327-47273099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr3:36691549-36691311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr3:56650625-56650372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr3:43040053-43039607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr3:17829008-17828530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr3:32146446-32145971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr3:5883179-5883704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr3:57485084-57484543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr3:64017725-64017164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:18542769-18542194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:34031258-34030685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:36882273-36881708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:42431871-42432444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:56340781-56340214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:69933036-69933608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr3:78027772-78027196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
1-591
               

               
Cow position:
               
chr3:26949156-26949752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
2-567
               

               
Cow position:
               
chr3:70084003-70083437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
2-568
               

               
Cow position:
               
chr3:42580325-42579754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr3:80871551-80871926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
6-558
               

               
Cow position:
               
chr3:30314204-30314771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
6-566
               

               
Cow position:
               
chr3:18811147-18811715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
6-609
               

               
Cow position:
               
chr3:4026919-4027538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
6-610
               

               
Cow position:
               
chr3:45775425-45774833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
12-567
               

               
Cow position:
               
chr3:40823038-40823601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
13-208
               

               
Cow position:
               
chr3:52865095-52864899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
13-251
               

               
Cow position:
               
chr3:39326342-39326581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
13-460
               

               
Cow position:
               
chr3:38866059-38866504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
13-502
               

               
Cow position:
               
chr3:18357228-18356736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 31
               

               
Conread position:
               
13-507
               

               
Cow position:
               
chr3:50914955-50915462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr3:23291754-23291226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
13-536
               

               
Cow position:
               
chr3:57499860-57499361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
13-545
               

               
Cow position:
               
chr3:19938564-19939078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
13-552
               

               
Cow position:
               
chr3:5954536-5953985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
13-555
               

               
Cow position:
               
chr3:48061176-48060628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
13-555
               

               
Cow position:
               
chr3:50128223-50127671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
13-557
               

               
Cow position:
               
chr3:18463925-18463382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 32
               

               
Conread position:
               
13-558
               

               
Cow position:
               
chr3:10239303-10239857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
13-558
               

               
Cow position:
               
chr3:36127042-36127599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
13-565
               

               
Cow position:
               
chr3:34396405-34395868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
13-567
               

               
Cow position:
               
chr3:59861016-59861580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
13-567
               

               
Cow position:
               
chr3:72629722-72630283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
13-567
               

               
Cow position:
               
chr3:75041512-75040956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
13-575
               

               
Cow position:
               
chr3:2711307-2710738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
13-588
               

               
Cow position:
               
chr3:594240-594810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 32
               

               
Conread position:
               
13-588
               

               
Cow position:
               
chr3:19757309-19756725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
13-591
               

               
Cow position:
               
chr3:24591960-24591387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 32
               

               
Conread position:
               
13-597
               

               
Cow position:
               
chr3:60210525-60209935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
13-598
               

               
Cow position:
               
chr3:3980040-3980638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
13-604
               

               
Cow position:
               
chr3:64358513-64357909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
13-609
               

               
Cow position:
               
chr3:6685112-6685712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
13-609
               

               
Cow position:
               
chr3:48231331-48230741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 32
               

               
Conread position:
               
13-628
               

               
Cow position:
               
chr3:3054263-3054876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
14-353
               

               
Cow position:
               
chr3:4285537-4285887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
14-354
               

               
Cow position:
               
chr3:63005497-63005144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
14-383
               

               
Cow position:
               
chr3:14634447-14634081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 31
               

               
Conread position:
               
14-455
               

               
Cow position:
               
chr3:57856388-57856841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
14-534
               

               
Cow position:
               
chr3:24314130-24314652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
14-537
               

               
Cow position:
               
chr3:16867125-16866587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
14-545
               

               
Cow position:
               
chr3:2917114-2917655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
14-545
               

               
Cow position:
               
chr3:22335544-22336082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr3:40340308-40340056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-326
               

               
Cow position:
               
chr3:72704850-72705172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
15-396
               

               
Cow position:
               
chr3:37968737-37969124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
15-444
               

               
Cow position:
               
chr3:46678260-46677821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-486
               

               
Cow position:
               
chr3:5047531-5047049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
15-499
               

               
Cow position:
               
chr3:15989383-15988879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-538
               

               
Cow position:
               
chr3:472192-472719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
15-538
               

               
Cow position:
               
chr3:31354601-31354078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
15-538
               

               
Cow position:
               
chr3:49614324-49613790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:3522667-3523215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:3806012-3806521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:6782043-6782578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:14440075-14439567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 30
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:32623356-32622843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:41212085-41211543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:45032394-45032935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:46861645-46861109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:56320963-56321509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:64028430-64027892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-545
               

               
Cow position:
               
chr3:64650284-64650820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
15-555
               

               
Cow position:
               
chr3:58947110-58947665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
15-556
               

               
Cow position:
               
chr3:207507-206959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
15-557
               

               
Cow position:
               
chr3:2633581-2634123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
15-557
               

               
Cow position:
               
chr3:2653763-2654305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
15-557
               

               
Cow position:
               
chr3:66119309-66119858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
15-558
               

               
Cow position:
               
chr3:47082005-47081452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
15-567
               

               
Cow position:
               
chr3:21183029-21182473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
15-568
               

               
Cow position:
               
chr3:55230041-55229484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
15-578
               

               
Cow position:
               
chr3:9716464-9717033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
16-538
               

               
Cow position:
               
chr3:19878316-19878845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
16-538
               

               
Cow position:
               
chr3:47179550-47179016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
16-545
               

               
Cow position:
               
chr3:66891307-66890769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
18-261
               

               
Cow position:
               
chr3:17952017-17952265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
18-439
               

               
Cow position:
               
chr3:16072818-16073225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
18-486
               

               
Cow position:
               
chr3:43330871-43330406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
18-538
               

               
Cow position:
               
chr3:18729476-18728953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
18-538
               

               
Cow position:
               
chr3:42630671-42631201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
19-538
               

               
Cow position:
               
chr3:5829972-5829442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
19-557
               

               
Cow position:
               
chr3:31898316-31897774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
19-557
               

               
Cow position:
               
chr3:66638396-66638943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
19-559
               

               
Cow position:
               
chr3:77474419-77474968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
19-591
               

               
Cow position:
               
chr3:15177969-15178558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
20-609
               

               
Cow position:
               
chr3:66990461-66991027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr3:49677421-49677645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
27-409
               

               
Cow position:
               
chr3:21945737-21945351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
29-538
               

               
Cow position:
               
chr3:51940739-51940238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 15
               

               
Conread position:
               
39-610
               

               
Cow position:
               
chr3:36099021-36098452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
40-447
               

               
Cow position:
               
chr3:49333078-49333487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 196
               

               
Conread position:
               
40-530
               

               
Cow position:
               
chr3:20871692-20871207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
41-559
               

               
Cow position:
               
chr3:32842748-32842235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
45-258
               

               
Cow position:
               
chr3:2909412-2909194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
45-545
               

               
Cow position:
               
chr3:45869521-45869024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
48-538
               

               
Cow position:
               
chr3:32618221-32617734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
50-456
               

               
Cow position:
               
chr3:54865010-54864594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
58-391
               

               
Cow position:
               
chr3:63242027-63241716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
224, 20
               

               
Conread position:
               
59-520
               

               
Cow position:
               
chr3:41300828-41301293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
62-558
               

               
Cow position:
               
chr3:28929928-28929437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
206, 20
               

               
Conread position:
               
71-463
               

               
Cow position:
               
chr3:57501058-57500674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
172, 128
               

               
Conread position:
               
72-261
               

               
Cow position:
               
chr3:57900930-57901119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-442
               

               
Cow position:
               
chr3:17898217-17898585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
72-467
               

               
Cow position:
               
chr3:17775815-17776201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 20
               

               
Conread position:
               
72-470
               

               
Cow position:
               
chr3:65583899-65583489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
193, 57
               

               
Conread position:
               
72-537
               

               
Cow position:
               
chr3:5995980-5995510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 22
               

               
Conread position:
               
72-537
               

               
Cow position:
               
chr3:54783258-54783729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
72-610
               

               
Cow position:
               
chr3:14754581-14754033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 103
               

               
Conread position:
               
72-610
               

               
Cow position:
               
chr3:56097255-56097783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
73-449
               

               
Cow position:
               
chr3:42445351-42444986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
310, 79
               

               
Conread position:
               
73-538
               

               
Cow position:
               
chr3:21305450-21304996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 66
               

               
Conread position:
               
74-516
               

               
Cow position:
               
chr3:19943781-19944215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 99
               

               
Conread position:
               
74-545
               

               
Cow position:
               
chr3:7159014-7158539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 131
               

               
Conread position:
               
74-545
               

               
Cow position:
               
chr3:17936347-17935869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 70
               

               
Conread position:
               
74-580
               

               
Cow position:
               
chr3:29594920-29595429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
76-538
               

               
Cow position:
               
chr3:54785485-54785943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr3:26573803-26573496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
81-568
               

               
Cow position:
               
chr3:53515343-53515828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
94-388
               

               
Cow position:
               
chr3:13274203-13273901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 291
               

               
Conread position:
               
94-545
               

               
Cow position:
               
chr3:7168532-7168986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 144
               

               
Conread position:
               
94-545
               

               
Cow position:
               
chr3:36117412-36117857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 276
               

               
Conread position:
               
106-558
               

               
Cow position:
               
chr3:66619928-66620379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 10
               

               
Conread position:
               
109-545
               

               
Cow position:
               
chr3:18859171-18859608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 197
               

               
Conread position:
               
120-609
               

               
Cow position:
               
chr3:19802422-19802913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 193
               

               
Conread position:
               
121-537
               

               
Cow position:
               
chr3:57995863-57995438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
132, 304
               

               
Conread position:
               
123-495
               

               
Cow position:
               
chr3:29327214-29326837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
164-559
               

               
Cow position:
               
chr3:30929466-30929847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
219, 86
               

               
Conread position:
               
170-537
               

               
Cow position:
               
chr3:26822681-26822322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 84
               

               
Conread position:
               
178-427
               

               
Cow position:
               
chr3:49276298-49276045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
181-537
               

               
Cow position:
               
chr3:16727100-16726752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
182-514
               

               
Cow position:
               
chr3:56395940-56396276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
188-609
               

               
Cow position:
               
chr3:52864641-52864205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
188-610
               

               
Cow position:
               
chr3:34093613-34093181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
190-567
               

               
Cow position:
               
chr3:23214229-23213848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
213-538
               

               
Cow position:
               
chr3:83234269-83233942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 238
               

               
Conread position:
               
213-567
               

               
Cow position:
               
chr3:49137685-49137325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 338
               

               
Conread position:
               
217-511
               

               
Cow position:
               
chr3:13518422-13518134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 187
               

               
Conread position:
               
222-556
               

               
Cow position:
               
chr3:49677651-49677988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 136
               

               
Conread position:
               
225-609
               

               
Cow position:
               
chr3:39326591-39326981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
242-538
               

               
Cow position:
               
chr3:40157621-40157322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
243-557
               

               
Cow position:
               
chr3:45895673-45895355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 304
               

               
Conread position:
               
243-557
               

               
Cow position:
               
chr3:45974382-45974700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 304
               

               
Conread position:
               
243-567
               

               
Cow position:
               
chr3:49545322-49544993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 318
               

               
Conread position:
               
276-537
               

               
Cow position:
               
chr3:19891057-19890802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
277-609
               

               
Cow position:
               
chr3:2908428-2908104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
278-545
               

               
Cow position:
               
chr3:68700043-68699779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
278-555
               

               
Cow position:
               
chr3:77423607-77423882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 125
               

               
Conread position:
               
286-538
               

               
Cow position:
               
chr3:77442818-77443063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
288-537
               

               
Cow position:
               
chr3:49162633-49162880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
120, 115
               

               
Conread position:
               
293-545
               

               
Cow position:
               
chr3:36864418-36864165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
295-486
               

               
Cow position:
               
chr3:24642735-24642927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 150
               

               
Conread position:
               
304-545
               

               
Cow position:
               
chr3:68873802-68873561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 175
               

               
Conread position:
               
305-537
               

               
Cow position:
               
chr3:42688550-42688781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 145
               

               
Conread position:
               
319-609
               

               
Cow position:
               
chr3:6660189-6660479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
354-591
               

               
Cow position:
               
chr3:26837760-26837520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
165, 125
               

               
Conread position:
               
358-502
               

               
Cow position:
               
chr3:40997978-40998124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
362-539
               

               
Cow position:
               
chr3:63004723-63004547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
365-538
               

               
Cow position:
               
chr3:29331264-29331090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
372-609
               

               
Cow position:
               
chr3:14632678-14632435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
384-538
               

               
Cow position:
               
chr3:7481199-7481045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
384-557
               

               
Cow position:
               
chr3:53713081-53713251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
393-545
               

               
Cow position:
               
chr3:40340070-40339918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
440-587
               

               
Cow position:
               
chr3:63241688-63241534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               
Show alignments to all cow chromosomes.