Cow genome map
Conread name: | Ss1.1-Utr1-UTR01A020092.5 |
Conread position: | 1-239 |
Cow position: | chr3:47273327-47273099 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1-240 |
Cow position: | chr3:36691549-36691311 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 178 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 78, 42 |
Conread position: | 1-254 |
Cow position: | chr3:56650625-56650372 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 42 |
Conread position: | 1-450 |
Cow position: | chr3:43040053-43039607 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 1-470 |
Cow position: | chr3:17829008-17828530 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 46 |
Conread position: | 1-472 |
Cow position: | chr3:32146446-32145971 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 42 |
Conread position: | 1-516 |
Cow position: | chr3:5883179-5883704 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 42 |
Conread position: | 1-537 |
Cow position: | chr3:57485084-57484543 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 46 |
Conread position: | 1-552 |
Cow position: | chr3:64017725-64017164 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 42 |
Conread position: | 1-567 |
Cow position: | chr3:18542769-18542194 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 1-567 |
Cow position: | chr3:34031258-34030685 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 42 |
Conread position: | 1-567 |
Cow position: | chr3:36882273-36881708 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 45 |
Conread position: | 1-567 |
Cow position: | chr3:42431871-42432444 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 1-567 |
Cow position: | chr3:56340781-56340214 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 44 |
Conread position: | 1-567 |
Cow position: | chr3:69933036-69933608 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 1-567 |
Cow position: | chr3:78027772-78027196 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 44 |
Conread position: | 1-591 |
Cow position: | chr3:26949156-26949752 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 34 |
Conread position: | 2-567 |
Cow position: | chr3:70084003-70083437 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 40 |
Conread position: | 2-568 |
Cow position: | chr3:42580325-42579754 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 41 |
Conread position: | 6-383 |
Cow position: | chr3:80871551-80871926 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 262 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 73, 37 |
Conread position: | 6-558 |
Cow position: | chr3:30314204-30314771 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 39 |
Conread position: | 6-566 |
Cow position: | chr3:18811147-18811715 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 39 |
Conread position: | 6-609 |
Cow position: | chr3:4026919-4027538 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 37 |
Conread position: | 6-610 |
Cow position: | chr3:45775425-45774833 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 37 |
Conread position: | 12-567 |
Cow position: | chr3:40823038-40823601 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 31 |
Conread position: | 13-208 |
Cow position: | chr3:52865095-52864899 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 64, 22 |
Conread position: | 13-251 |
Cow position: | chr3:39326342-39326581 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 32 |
Conread position: | 13-460 |
Cow position: | chr3:38866059-38866504 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 14 |
Conread position: | 13-502 |
Cow position: | chr3:18357228-18356736 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 13-507 |
Cow position: | chr3:50914955-50915462 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 31 |
Conread position: | 13-531 |
Cow position: | chr3:23291754-23291226 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 13-536 |
Cow position: | chr3:57499860-57499361 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 29 |
Conread position: | 13-545 |
Cow position: | chr3:19938564-19939078 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 30 |
Conread position: | 13-552 |
Cow position: | chr3:5954536-5953985 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 13-555 |
Cow position: | chr3:48061176-48060628 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 24 |
Conread position: | 13-555 |
Cow position: | chr3:50128223-50127671 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 13-557 |
Cow position: | chr3:18463925-18463382 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 32 |
Conread position: | 13-558 |
Cow position: | chr3:10239303-10239857 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 33 |
Conread position: | 13-558 |
Cow position: | chr3:36127042-36127599 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 26 |
Conread position: | 13-565 |
Cow position: | chr3:34396405-34395868 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 30 |
Conread position: | 13-567 |
Cow position: | chr3:59861016-59861580 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 30 |
Conread position: | 13-567 |
Cow position: | chr3:72629722-72630283 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 26 |
Conread position: | 13-567 |
Cow position: | chr3:75041512-75040956 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 13-575 |
Cow position: | chr3:2711307-2710738 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 32 |
Conread position: | 13-588 |
Cow position: | chr3:594240-594810 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 32 |
Conread position: | 13-588 |
Cow position: | chr3:19757309-19756725 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 30 |
Conread position: | 13-591 |
Cow position: | chr3:24591960-24591387 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 32 |
Conread position: | 13-597 |
Cow position: | chr3:60210525-60209935 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 30 |
Conread position: | 13-598 |
Cow position: | chr3:3980040-3980638 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 39 |
Conread position: | 13-604 |
Cow position: | chr3:64358513-64357909 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 30 |
Conread position: | 13-609 |
Cow position: | chr3:6685112-6685712 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 30 |
Conread position: | 13-609 |
Cow position: | chr3:48231331-48230741 (view UCSC Genome Browser custom track) |
Alignm length: | 612 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 32 |
Conread position: | 13-628 |
Cow position: | chr3:3054263-3054876 (view UCSC Genome Browser custom track) |
Alignm length: | 633 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 32 |
Conread position: | 14-353 |
Cow position: | chr3:4285537-4285887 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 29 |
Conread position: | 14-354 |
Cow position: | chr3:63005497-63005144 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 54 |
Conread position: | 14-383 |
Cow position: | chr3:14634447-14634081 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 31 |
Conread position: | 14-455 |
Cow position: | chr3:57856388-57856841 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 29 |
Conread position: | 14-534 |
Cow position: | chr3:24314130-24314652 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 33 |
Conread position: | 14-537 |
Cow position: | chr3:16867125-16866587 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 350 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 31, 134 |
Conread position: | 14-545 |
Cow position: | chr3:2917114-2917655 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 29 |
Conread position: | 14-545 |
Cow position: | chr3:22335544-22336082 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 29 |
Conread position: | 15-264 |
Cow position: | chr3:40340308-40340056 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 148 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-326 |
Cow position: | chr3:72704850-72705172 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 28 |
Conread position: | 15-396 |
Cow position: | chr3:37968737-37969124 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 34 |
Conread position: | 15-444 |
Cow position: | chr3:46678260-46677821 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-486 |
Cow position: | chr3:5047531-5047049 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 28 |
Conread position: | 15-499 |
Cow position: | chr3:15989383-15988879 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-538 |
Cow position: | chr3:472192-472719 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 20 |
Conread position: | 15-538 |
Cow position: | chr3:31354601-31354078 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 30 |
Conread position: | 15-538 |
Cow position: | chr3:49614324-49613790 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:3522667-3523215 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:3806012-3806521 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 30 |
Conread position: | 15-545 |
Cow position: | chr3:6782043-6782578 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:14440075-14439567 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 30 |
Conread position: | 15-545 |
Cow position: | chr3:32623356-32622843 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:41212085-41211543 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:45032394-45032935 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:46861645-46861109 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 28 |
Conread position: | 15-545 |
Cow position: | chr3:56320963-56321509 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:64028430-64027892 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-545 |
Cow position: | chr3:64650284-64650820 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 32 |
Conread position: | 15-555 |
Cow position: | chr3:58947110-58947665 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 30 |
Conread position: | 15-556 |
Cow position: | chr3:207507-206959 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 28 |
Conread position: | 15-557 |
Cow position: | chr3:2633581-2634123 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 30 |
Conread position: | 15-557 |
Cow position: | chr3:2653763-2654305 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 28 |
Conread position: | 15-557 |
Cow position: | chr3:66119309-66119858 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 30 |
Conread position: | 15-558 |
Cow position: | chr3:47082005-47081452 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 28 |
Conread position: | 15-567 |
Cow position: | chr3:21183029-21182473 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 28 |
Conread position: | 15-568 |
Cow position: | chr3:55230041-55229484 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 28 |
Conread position: | 15-578 |
Cow position: | chr3:9716464-9717033 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 28 |
Conread position: | 16-538 |
Cow position: | chr3:19878316-19878845 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 31 |
Conread position: | 16-538 |
Cow position: | chr3:47179550-47179016 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 31 |
Conread position: | 16-545 |
Cow position: | chr3:66891307-66890769 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 27 |
Conread position: | 18-261 |
Cow position: | chr3:17952017-17952265 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 181 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 60, 28 |
Conread position: | 18-439 |
Cow position: | chr3:16072818-16073225 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 286 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 60, 28 |
Conread position: | 18-486 |
Cow position: | chr3:43330871-43330406 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 299 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 60, 13 |
Conread position: | 18-538 |
Cow position: | chr3:18729476-18728953 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 21 |
Conread position: | 18-538 |
Cow position: | chr3:42630671-42631201 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 25 |
Conread position: | 19-538 |
Cow position: | chr3:5829972-5829442 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 26 |
Conread position: | 19-557 |
Cow position: | chr3:31898316-31897774 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 25 |
Conread position: | 19-557 |
Cow position: | chr3:66638396-66638943 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 24 |
Conread position: | 19-559 |
Cow position: | chr3:77474419-77474968 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 24 |
Conread position: | 19-591 |
Cow position: | chr3:15177969-15178558 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 24 |
Conread position: | 20-609 |
Cow position: | chr3:66990461-66991027 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 23 |
Conread position: | 24-245 |
Cow position: | chr3:49677421-49677645 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 50, 19 |
Conread position: | 27-409 |
Cow position: | chr3:21945737-21945351 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 16 |
Conread position: | 29-538 |
Cow position: | chr3:51940739-51940238 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 15 |
Conread position: | 39-610 |
Cow position: | chr3:36099021-36098452 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 40 |
Conread position: | 40-447 |
Cow position: | chr3:49333078-49333487 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 272 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 39, 196 |
Conread position: | 40-530 |
Cow position: | chr3:20871692-20871207 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 313 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 83, 39 |
Conread position: | 41-559 |
Cow position: | chr3:32842748-32842235 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 91 |
Conread position: | 45-258 |
Cow position: | chr3:2909412-2909194 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 33, 184 |
Conread position: | 45-545 |
Cow position: | chr3:45869521-45869024 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 61 |
Conread position: | 48-538 |
Cow position: | chr3:32618221-32617734 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 312 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 142, 30 |
Conread position: | 50-456 |
Cow position: | chr3:54865010-54864594 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 58-391 |
Cow position: | chr3:63242027-63241716 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 236 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 224, 20 |
Conread position: | 59-520 |
Cow position: | chr3:41300828-41301293 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 301 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 19, 33 |
Conread position: | 62-558 |
Cow position: | chr3:28929928-28929437 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 314 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 206, 20 |
Conread position: | 71-463 |
Cow position: | chr3:57501058-57500674 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 259 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 172, 128 |
Conread position: | 72-261 |
Cow position: | chr3:57900930-57901119 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 155 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 72-442 |
Cow position: | chr3:17898217-17898585 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 260 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 30, 20 |
Conread position: | 72-467 |
Cow position: | chr3:17775815-17776201 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 20 |
Conread position: | 72-470 |
Cow position: | chr3:65583899-65583489 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 283 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 193, 57 |
Conread position: | 72-537 |
Cow position: | chr3:5995980-5995510 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 22 |
Conread position: | 72-537 |
Cow position: | chr3:54783258-54783729 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 13 |
Conread position: | 72-610 |
Cow position: | chr3:14754581-14754033 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 103 |
Conread position: | 72-610 |
Cow position: | chr3:56097255-56097783 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 358 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 193, 23 |
Conread position: | 73-449 |
Cow position: | chr3:42445351-42444986 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 249 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 310, 79 |
Conread position: | 73-538 |
Cow position: | chr3:21305450-21304996 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 66 |
Conread position: | 74-516 |
Cow position: | chr3:19943781-19944215 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 99 |
Conread position: | 74-545 |
Cow position: | chr3:7159014-7158539 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 131 |
Conread position: | 74-545 |
Cow position: | chr3:17936347-17935869 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 70 |
Conread position: | 74-580 |
Cow position: | chr3:29594920-29595429 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 70 |
Conread position: | 76-538 |
Cow position: | chr3:54785485-54785943 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 16 |
Conread position: | 77-388 |
Cow position: | chr3:26573803-26573496 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 203 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 108, 60 |
Conread position: | 81-568 |
Cow position: | chr3:53515343-53515828 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 26 |
Conread position: | 94-388 |
Cow position: | chr3:13274203-13273901 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 197 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 36, 291 |
Conread position: | 94-545 |
Cow position: | chr3:7168532-7168986 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 144 |
Conread position: | 94-545 |
Cow position: | chr3:36117412-36117857 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 276 |
Conread position: | 106-558 |
Cow position: | chr3:66619928-66620379 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 10 |
Conread position: | 109-545 |
Cow position: | chr3:18859171-18859608 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 197 |
Conread position: | 120-609 |
Cow position: | chr3:19802422-19802913 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 193 |
Conread position: | 121-537 |
Cow position: | chr3:57995863-57995438 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 268 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 132, 304 |
Conread position: | 123-495 |
Cow position: | chr3:29327214-29326837 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 259 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 30, 14 |
Conread position: | 164-559 |
Cow position: | chr3:30929466-30929847 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 267 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 219, 86 |
Conread position: | 170-537 |
Cow position: | chr3:26822681-26822322 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 84 |
Conread position: | 178-427 |
Cow position: | chr3:49276298-49276045 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 171 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 31, 71 |
Conread position: | 181-537 |
Cow position: | chr3:16727100-16726752 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 231 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 108, 82 |
Conread position: | 182-514 |
Cow position: | chr3:56395940-56396276 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 235 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 12, 44 |
Conread position: | 188-609 |
Cow position: | chr3:52864641-52864205 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 11 |
Conread position: | 188-610 |
Cow position: | chr3:34093613-34093181 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 25 |
Conread position: | 190-567 |
Cow position: | chr3:23214229-23213848 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 146 |
Conread position: | 213-538 |
Cow position: | chr3:83234269-83233942 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 238 |
Conread position: | 213-567 |
Cow position: | chr3:49137685-49137325 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 338 |
Conread position: | 217-511 |
Cow position: | chr3:13518422-13518134 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 187 |
Conread position: | 222-556 |
Cow position: | chr3:49677651-49677988 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 136 |
Conread position: | 225-609 |
Cow position: | chr3:39326591-39326981 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 10 |
Conread position: | 242-538 |
Cow position: | chr3:40157621-40157322 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 137 |
Conread position: | 243-557 |
Cow position: | chr3:45895673-45895355 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 304 |
Conread position: | 243-557 |
Cow position: | chr3:45974382-45974700 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 304 |
Conread position: | 243-567 |
Cow position: | chr3:49545322-49544993 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 318 |
Conread position: | 276-537 |
Cow position: | chr3:19891057-19890802 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 181 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 8, 62 |
Conread position: | 277-609 |
Cow position: | chr3:2908428-2908104 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 8 |
Conread position: | 278-545 |
Cow position: | chr3:68700043-68699779 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 130 |
Conread position: | 278-555 |
Cow position: | chr3:77423607-77423882 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 263, 125 |
Conread position: | 286-538 |
Cow position: | chr3:77442818-77443063 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 171 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 97, 52 |
Conread position: | 288-537 |
Cow position: | chr3:49162633-49162880 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 120, 115 |
Conread position: | 293-545 |
Cow position: | chr3:36864418-36864165 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 295-486 |
Cow position: | chr3:24642735-24642927 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 88, 150 |
Conread position: | 304-545 |
Cow position: | chr3:68873802-68873561 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 175 |
Conread position: | 305-537 |
Cow position: | chr3:42688550-42688781 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 160 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 86, 145 |
Conread position: | 319-609 |
Cow position: | chr3:6660189-6660479 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 193 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 68, 92 |
Conread position: | 354-591 |
Cow position: | chr3:26837760-26837520 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 182 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 165, 125 |
Conread position: | 358-502 |
Cow position: | chr3:40997978-40998124 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 362-539 |
Cow position: | chr3:63004723-63004547 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 26, 166 |
Conread position: | 365-538 |
Cow position: | chr3:29331264-29331090 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 148 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 372-609 |
Cow position: | chr3:14632678-14632435 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 112 |
Conread position: | 384-538 |
Cow position: | chr3:7481199-7481045 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 122 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 384-557 |
Cow position: | chr3:53713081-53713251 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 393-545 |
Cow position: | chr3:40340070-40339918 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 123 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 440-587 |
Cow position: | chr3:63241688-63241534 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.