Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A020092.5 |
| Conread position: | 1-259 |
| Cow position: | chr6:47043752-47043489 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-261 |
| Cow position: | chr6:10054294-10054557 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-484 |
| Cow position: | chr6:21971353-21971860 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-511 |
| Cow position: | chr6:5951557-5951045 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 1-552 |
| Cow position: | chr6:913311-913895 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-552 |
| Cow position: | chr6:3278271-3277708 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-555 |
| Cow position: | chr6:8761621-8761060 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-555 |
| Cow position: | chr6:24238727-24239310 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 1-567 |
| Cow position: | chr6:8201412-8201992 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr6:15280863-15280297 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr6:29311175-29311746 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr6:36525722-36526303 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr6:55544647-55544072 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-609 |
| Cow position: | chr6:38231955-38232582 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 2-596 |
| Cow position: | chr6:7179990-7179401 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 44 |
| Conread position: | 6-552 |
| Cow position: | chr6:35877032-35876476 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 6-567 |
| Cow position: | chr6:65841274-65841842 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 9-356 |
| Cow position: | chr6:8019782-8020120 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 273, 34 |
| Conread position: | 11-567 |
| Cow position: | chr6:15141485-15140925 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 13-252 |
| Cow position: | chr6:21686587-21686823 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 13-261 |
| Cow position: | chr6:39437335-39437585 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-261 |
| Cow position: | chr6:65909118-65909368 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 13-298 |
| Cow position: | chr6:1823555-1823264 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-316 |
| Cow position: | chr6:65900218-65899916 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 269, 32 |
| Conread position: | 13-373 |
| Cow position: | chr6:10640821-10641188 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 13-388 |
| Cow position: | chr6:42723228-42722850 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 13-436 |
| Cow position: | chr6:12093165-12092766 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 32 |
| Conread position: | 13-511 |
| Cow position: | chr6:28274680-28275183 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-554 |
| Cow position: | chr6:27468950-27469491 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-556 |
| Cow position: | chr6:65880558-65881113 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 13-557 |
| Cow position: | chr6:33388528-33389086 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 13-566 |
| Cow position: | chr6:3889797-3889222 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 13-567 |
| Cow position: | chr6:701645-702205 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-567 |
| Cow position: | chr6:20561417-20560857 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-567 |
| Cow position: | chr6:30275491-30274924 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-567 |
| Cow position: | chr6:30478790-30479353 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 18 |
| Conread position: | 13-567 |
| Cow position: | chr6:66231505-66232050 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 31 |
| Conread position: | 13-588 |
| Cow position: | chr6:27530307-27529732 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-609 |
| Cow position: | chr6:35420878-35420305 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 32 |
| Conread position: | 13-610 |
| Cow position: | chr6:59741357-59740752 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 14-239 |
| Cow position: | chr6:45671957-45672187 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-264 |
| Cow position: | chr6:40274951-40275206 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 14-545 |
| Cow position: | chr6:1405544-1405003 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-545 |
| Cow position: | chr6:34127044-34127588 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 14-545 |
| Cow position: | chr6:58409217-58408677 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 14-545 |
| Cow position: | chr6:68026475-68027027 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 14-558 |
| Cow position: | chr6:40554891-40554339 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 31 |
| Conread position: | 14-567 |
| Cow position: | chr6:34893317-34892751 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 15-231 |
| Cow position: | chr6:39907843-39908064 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-261 |
| Cow position: | chr6:13978216-13978464 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-263 |
| Cow position: | chr6:65007537-65007784 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 15-466 |
| Cow position: | chr6:57870310-57869847 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-468 |
| Cow position: | chr6:42927080-42927540 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 15-493 |
| Cow position: | chr6:11278002-11277513 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 15-524 |
| Cow position: | chr6:17045758-17046269 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-529 |
| Cow position: | chr6:7141778-7141268 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-538 |
| Cow position: | chr6:28063035-28063564 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-538 |
| Cow position: | chr6:65927633-65928164 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 15-545 |
| Cow position: | chr6:331772-331234 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:2374400-2374935 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 15-545 |
| Cow position: | chr6:2554401-2554941 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:13103752-13104293 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-545 |
| Cow position: | chr6:13943608-13944144 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:17598583-17598044 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:26671167-26670623 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 15-545 |
| Cow position: | chr6:27169270-27169816 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:28491820-28491279 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:43617410-43617950 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-545 |
| Cow position: | chr6:44028744-44029274 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:44150864-44150321 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr6:65822433-65821891 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-557 |
| Cow position: | chr6:19453622-19454159 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 15-567 |
| Cow position: | chr6:6566306-6566859 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 16-252 |
| Cow position: | chr6:6476760-6476519 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 18-362 |
| Cow position: | chr6:2885920-2886259 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 18-382 |
| Cow position: | chr6:68362618-68362251 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 18-566 |
| Cow position: | chr6:59919582-59919029 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 18-567 |
| Cow position: | chr6:10558945-10558404 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 25 |
| Conread position: | 18-603 |
| Cow position: | chr6:16672083-16672680 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 20-567 |
| Cow position: | chr6:62396867-62397425 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 23 |
| Conread position: | 21-609 |
| Cow position: | chr6:37115837-37116440 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 24-537 |
| Cow position: | chr6:3488698-3488171 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 29-524 |
| Cow position: | chr6:13317776-13317284 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 46-434 |
| Cow position: | chr6:49520667-49520256 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 19 |
| Conread position: | 46-558 |
| Cow position: | chr6:41552752-41553253 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 33 |
| Conread position: | 46-568 |
| Cow position: | chr6:34203238-34203762 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 57-539 |
| Cow position: | chr6:35433280-35433759 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 199 |
| Conread position: | 58-446 |
| Cow position: | chr6:39161943-39162321 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 83, 19 |
| Conread position: | 59-491 |
| Cow position: | chr6:48368139-48368556 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 20 |
| Conread position: | 59-498 |
| Cow position: | chr6:28474448-28474890 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 59-595 |
| Cow position: | chr6:15476023-15476569 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 70-496 |
| Cow position: | chr6:34024583-34024990 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 136 |
| Conread position: | 71-567 |
| Cow position: | chr6:33459618-33460117 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 240 |
| Conread position: | 72-247 |
| Cow position: | chr6:42564699-42564874 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-359 |
| Cow position: | chr6:50497703-50497410 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 72-388 |
| Cow position: | chr6:52116014-52116329 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 72-446 |
| Cow position: | chr6:19338389-19338021 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 72-483 |
| Cow position: | chr6:10630222-10630628 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 214, 132 |
| Conread position: | 72-521 |
| Cow position: | chr6:57010102-57009650 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 213, 8 |
| Conread position: | 72-537 |
| Cow position: | chr6:12528591-12529054 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 196, 10 |
| Conread position: | 72-538 |
| Cow position: | chr6:16051642-16052108 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 144 |
| Conread position: | 72-539 |
| Cow position: | chr6:525998-526463 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 307 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 15, 178 |
| Conread position: | 72-539 |
| Cow position: | chr6:37642157-37642610 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 29 |
| Conread position: | 72-567 |
| Cow position: | chr6:13276558-13277055 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 255 |
| Conread position: | 72-604 |
| Cow position: | chr6:1100830-1100287 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 74-370 |
| Cow position: | chr6:11353501-11353800 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 176, 10 |
| Conread position: | 74-545 |
| Cow position: | chr6:13846803-13847267 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 187 |
| Conread position: | 75-260 |
| Cow position: | chr6:42359921-42359737 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 76-483 |
| Cow position: | chr6:44524991-44524595 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 50 |
| Conread position: | 76-487 |
| Cow position: | chr6:17931884-17932293 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 96-470 |
| Cow position: | chr6:2955176-2954806 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 170, 121 |
| Conread position: | 99-225 |
| Cow position: | chr6:28588629-28588503 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-597 |
| Cow position: | chr6:32330993-32330502 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 47 |
| Conread position: | 102-537 |
| Cow position: | chr6:11402838-11403270 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 83 |
| Conread position: | 114-545 |
| Cow position: | chr6:1412141-1411705 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 106 |
| Conread position: | 115-254 |
| Cow position: | chr6:52692840-52692973 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 117-567 |
| Cow position: | chr6:43793957-43793500 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 44 |
| Conread position: | 128-567 |
| Cow position: | chr6:28106022-28105592 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 76 |
| Conread position: | 161-502 |
| Cow position: | chr6:17099850-17099508 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 112 |
| Conread position: | 163-539 |
| Cow position: | chr6:6542812-6543183 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 177-521 |
| Cow position: | chr6:25214119-25214469 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 193-537 |
| Cow position: | chr6:32074859-32074508 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 155 |
| Conread position: | 199-545 |
| Cow position: | chr6:7866869-7866516 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 207-524 |
| Cow position: | chr6:64715121-64715443 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 213-557 |
| Cow position: | chr6:33900727-33900381 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 220-545 |
| Cow position: | chr6:3148908-3149239 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 229-545 |
| Cow position: | chr6:39908441-39908762 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 115 |
| Conread position: | 237-496 |
| Cow position: | chr6:31568879-31568619 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 175 |
| Conread position: | 244-496 |
| Cow position: | chr6:35722291-35722548 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 248-588 |
| Cow position: | chr6:47043271-47042924 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 316 |
| Conread position: | 278-609 |
| Cow position: | chr6:6476515-6476185 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 292-615 |
| Cow position: | chr6:25359487-25359820 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 177 |
| Conread position: | 293-558 |
| Cow position: | chr6:40315037-40315292 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 295-604 |
| Cow position: | chr6:12095416-12095114 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 304-537 |
| Cow position: | chr6:6155680-6155910 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 311-529 |
| Cow position: | chr6:40251663-40251882 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 332-558 |
| Cow position: | chr6:65899881-65899652 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 116, 134 |
| Conread position: | 358-537 |
| Cow position: | chr6:65007734-65007913 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 363-609 |
| Cow position: | chr6:43608301-43608056 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 374-609 |
| Cow position: | chr6:10641223-10641465 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 63 |
| Conread position: | 399-558 |
| Cow position: | chr6:1822551-1822392 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-505 |
| Cow position: | chr6:9738793-9738895 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-524 |
| Cow position: | chr6:58026856-58026971 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 410-549 |
| Cow position: | chr6:10499624-10499485 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 410-566 |
| Cow position: | chr6:39437647-39437801 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 412-588 |
| Cow position: | chr6:52693125-52693298 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 414-538 |
| Cow position: | chr6:65914317-65914440 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 414-565 |
| Cow position: | chr6:12650845-12650697 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 431-545 |
| Cow position: | chr6:40275209-40275323 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 436-545 |
| Cow position: | chr6:24323255-24323146 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.