Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A020092.5 |
| Conread position: | 1-242 |
| Cow position: | chr9:32968351-32968596 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 1-254 |
| Cow position: | chr9:51183099-51182835 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-286 |
| Cow position: | chr9:22650764-22651045 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-359 |
| Cow position: | chr9:6830934-6830580 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 42 |
| Conread position: | 1-516 |
| Cow position: | chr9:9012718-9013242 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 154 |
| Conread position: | 1-520 |
| Cow position: | chr9:3548561-3548033 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-537 |
| Cow position: | chr9:6051431-6050891 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-538 |
| Cow position: | chr9:30671979-30672525 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-557 |
| Cow position: | chr9:3567244-3566679 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 1-558 |
| Cow position: | chr9:42568482-42569047 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-559 |
| Cow position: | chr9:1996311-1995738 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-559 |
| Cow position: | chr9:5003622-5004177 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-566 |
| Cow position: | chr9:29629138-29628562 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-566 |
| Cow position: | chr9:31807149-31807718 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr9:4532100-4532675 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-567 |
| Cow position: | chr9:10321431-10321992 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 1-567 |
| Cow position: | chr9:60278413-60277838 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-588 |
| Cow position: | chr9:37971598-37971007 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 1-626 |
| Cow position: | chr9:59483060-59482430 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 2-540 |
| Cow position: | chr9:5424568-5424025 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 2-588 |
| Cow position: | chr9:6757179-6757777 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 108 |
| Conread position: | 6-353 |
| Cow position: | chr9:7002168-7002524 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 13-242 |
| Cow position: | chr9:829937-829705 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 13-259 |
| Cow position: | chr9:1979567-1979810 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 13-388 |
| Cow position: | chr9:2202832-2203204 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 13-389 |
| Cow position: | chr9:831811-831427 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 13-450 |
| Cow position: | chr9:29028608-29028158 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-491 |
| Cow position: | chr9:2052071-2052558 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 13-514 |
| Cow position: | chr9:37163187-37162673 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 13-516 |
| Cow position: | chr9:792886-792378 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 13-529 |
| Cow position: | chr9:59455978-59455450 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-538 |
| Cow position: | chr9:3024730-3025261 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 346 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 162, 30 |
| Conread position: | 13-551 |
| Cow position: | chr9:2500674-2500124 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-554 |
| Cow position: | chr9:64118450-64118997 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 13-557 |
| Cow position: | chr9:2185585-2186139 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 13-567 |
| Cow position: | chr9:42309304-42309865 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 13-567 |
| Cow position: | chr9:47001827-47002373 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 13-567 |
| Cow position: | chr9:59443476-59444034 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 13-588 |
| Cow position: | chr9:16175389-16175971 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 13-610 |
| Cow position: | chr9:35657587-35658178 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 14-214 |
| Cow position: | chr9:2488349-2488145 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-411 |
| Cow position: | chr9:2199733-2200137 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 14-484 |
| Cow position: | chr9:28021169-28021654 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 14-488 |
| Cow position: | chr9:1252345-1251868 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 14-537 |
| Cow position: | chr9:16267982-16268528 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-538 |
| Cow position: | chr9:25483495-25484030 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-538 |
| Cow position: | chr9:31194545-31194009 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-545 |
| Cow position: | chr9:163868-163339 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-545 |
| Cow position: | chr9:36724123-36724666 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 14-552 |
| Cow position: | chr9:59174535-59173989 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 14-567 |
| Cow position: | chr9:59535721-59536278 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 15-261 |
| Cow position: | chr9:54360230-54360475 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 15-438 |
| Cow position: | chr9:46626176-46625742 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-472 |
| Cow position: | chr9:4672230-4672698 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-479 |
| Cow position: | chr9:222923-222449 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-537 |
| Cow position: | chr9:2170681-2171214 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 15-538 |
| Cow position: | chr9:27933717-27934246 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-538 |
| Cow position: | chr9:34242975-34242440 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-538 |
| Cow position: | chr9:45872977-45873506 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 15-545 |
| Cow position: | chr9:131571-131025 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 15-545 |
| Cow position: | chr9:781179-780640 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 15-545 |
| Cow position: | chr9:17064774-17064219 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 15-545 |
| Cow position: | chr9:25755580-25755059 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 15-545 |
| Cow position: | chr9:28677597-28678137 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 15-552 |
| Cow position: | chr9:10315004-10315538 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 15-557 |
| Cow position: | chr9:28626407-28625868 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 30 |
| Conread position: | 15-606 |
| Cow position: | chr9:27034331-27034926 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 16-537 |
| Cow position: | chr9:3725903-3726437 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 16-545 |
| Cow position: | chr9:1076575-1076033 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 18-309 |
| Cow position: | chr9:13219947-13220245 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 18-336 |
| Cow position: | chr9:8969297-8968968 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 18-486 |
| Cow position: | chr9:55616972-55617435 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 18-511 |
| Cow position: | chr9:52570293-52570780 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 18-532 |
| Cow position: | chr9:26002487-26002001 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 204, 17 |
| Conread position: | 18-538 |
| Cow position: | chr9:3155658-3156180 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 18-539 |
| Cow position: | chr9:12845912-12845393 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 18-555 |
| Cow position: | chr9:31020434-31020996 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 18-557 |
| Cow position: | chr9:37129912-37129372 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 413 |
| Conread position: | 18-558 |
| Cow position: | chr9:25023675-25023127 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 19-232 |
| Cow position: | chr9:2065582-2065367 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 19-261 |
| Cow position: | chr9:2697304-2697058 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 19-603 |
| Cow position: | chr9:3356345-3355763 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 20-553 |
| Cow position: | chr9:9055438-9054892 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 24-538 |
| Cow position: | chr9:15072148-15072671 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 29-346 |
| Cow position: | chr9:52290283-52290599 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 263, 17 |
| Conread position: | 48-610 |
| Cow position: | chr9:6111319-6110765 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 57-499 |
| Cow position: | chr9:4984438-4984885 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 59-387 |
| Cow position: | chr9:870367-870041 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 72-259 |
| Cow position: | chr9:1294130-1293944 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 72-379 |
| Cow position: | chr9:15984174-15984478 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 81 |
| Conread position: | 72-382 |
| Cow position: | chr9:45473731-45473420 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 193, 9 |
| Conread position: | 72-387 |
| Cow position: | chr9:23409896-23410210 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 183 |
| Conread position: | 72-552 |
| Cow position: | chr9:3542495-3542978 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 184 |
| Conread position: | 73-539 |
| Cow position: | chr9:64158809-64159276 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 149 |
| Conread position: | 73-567 |
| Cow position: | chr9:7062407-7061910 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 474 |
| Conread position: | 74-332 |
| Cow position: | chr9:20310044-20309788 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 176, 36 |
| Conread position: | 74-551 |
| Cow position: | chr9:2800837-2800386 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 75-604 |
| Cow position: | chr9:39992608-39993142 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 32 |
| Conread position: | 77-530 |
| Cow position: | chr9:9331036-9330579 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 135, 124 |
| Conread position: | 83-411 |
| Cow position: | chr9:59425381-59425706 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 187, 92 |
| Conread position: | 83-538 |
| Cow position: | chr9:37064100-37063646 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 331 |
| Conread position: | 94-545 |
| Cow position: | chr9:30826388-30826846 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 95-538 |
| Cow position: | chr9:3006537-3006088 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 19 |
| Conread position: | 102-557 |
| Cow position: | chr9:7535242-7535688 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 107-567 |
| Cow position: | chr9:3586075-3586551 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 234 |
| Conread position: | 114-557 |
| Cow position: | chr9:34992110-34992570 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 127-537 |
| Cow position: | chr9:50789417-50789834 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 248 |
| Conread position: | 136-498 |
| Cow position: | chr9:4280212-4280573 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 131, 8 |
| Conread position: | 141-604 |
| Cow position: | chr9:13477457-13476993 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 185-477 |
| Cow position: | chr9:2001605-2001312 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 201-559 |
| Cow position: | chr9:18836823-18837196 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 136 |
| Conread position: | 218-569 |
| Cow position: | chr9:59510622-59510985 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 224-604 |
| Cow position: | chr9:6973964-6974357 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 229-388 |
| Cow position: | chr9:2064834-2064670 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 229-516 |
| Cow position: | chr9:7012176-7012455 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 235-567 |
| Cow position: | chr9:32968815-32969151 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 229 |
| Conread position: | 239-538 |
| Cow position: | chr9:51182343-51182037 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 261-538 |
| Cow position: | chr9:64018582-64018302 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 273-472 |
| Cow position: | chr9:22410223-22410024 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 104 |
| Conread position: | 278-537 |
| Cow position: | chr9:1979875-1980136 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 278-545 |
| Cow position: | chr9:40191780-40191512 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 281-461 |
| Cow position: | chr9:34719869-34720053 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 286-526 |
| Cow position: | chr9:2475193-2475429 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 112, 118 |
| Conread position: | 286-559 |
| Cow position: | chr9:1635458-1635719 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 293-500 |
| Cow position: | chr9:18067308-18067100 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 293-538 |
| Cow position: | chr9:54361347-54361588 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 127 |
| Conread position: | 295-538 |
| Cow position: | chr9:3394071-3393832 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 87, 110 |
| Conread position: | 306-554 |
| Cow position: | chr9:15683860-15684103 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 311-610 |
| Cow position: | chr9:37095124-37095425 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 337-552 |
| Cow position: | chr9:22653521-22653737 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 337-604 |
| Cow position: | chr9:44817814-44818089 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 105 |
| Conread position: | 340-545 |
| Cow position: | chr9:49177869-49177663 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 345-610 |
| Cow position: | chr9:20309568-20309300 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 355-552 |
| Cow position: | chr9:6830527-6830338 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 361-539 |
| Cow position: | chr9:21381928-21381753 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 365-538 |
| Cow position: | chr9:8968966-8968800 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 365-545 |
| Cow position: | chr9:31064416-31064597 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 369-545 |
| Cow position: | chr9:2488144-2487966 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 378-524 |
| Cow position: | chr9:7002518-7002664 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 379-588 |
| Cow position: | chr9:18509805-18509599 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 382-545 |
| Cow position: | chr9:60651711-60651548 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 408-604 |
| Cow position: | chr9:3803069-3803271 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 431-557 |
| Cow position: | chr9:45908334-45908212 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 454-604 |
| Cow position: | chr9:13222406-13222558 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 114 |
Show alignments to all cow chromosomes.