Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-107
Cow position: chr11:18509165-18509059 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 100

Conread position: 1-128
Cow position: chr11:43914065-43914197 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 1-130
Cow position: chr11:9837248-9837114 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-130
Cow position: chr11:75748287-75748418 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 98, 37

Conread position: 1-134
Cow position: chr11:77241223-77241358 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1-135
Cow position: chr11:35149014-35149150 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-136
Cow position: chr11:62808796-62808662 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 1-138
Cow position: chr11:18572655-18572793 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 95, 18

Conread position: 1-138
Cow position: chr11:77207901-77208034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 1-139
Cow position: chr11:47109823-47109966 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 73, 18

Conread position: 1-139
Cow position: chr11:48901225-48901088 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 18

Conread position: 1-140
Cow position: chr11:8105635-8105779 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 103, 77

Conread position: 1-140
Cow position: chr11:38670536-38670679 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 89

Conread position: 1-140
Cow position: chr11:47586495-47586356 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 68

Conread position: 1-140
Cow position: chr11:62965699-62965554 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 1-140
Cow position: chr11:63516680-63516821 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 18

Conread position: 1-140
Cow position: chr11:81614785-81614646 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 77

Conread position: 1-148
Cow position: chr11:40258558-40258408 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 92

Conread position: 1-150
Cow position: chr11:45898199-45898050 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 99, 18

Conread position: 1-150
Cow position: chr11:84385784-84385633 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 1-151
Cow position: chr11:36301224-36301073 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1-152
Cow position: chr11:6245175-6245324 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 1-152
Cow position: chr11:49148890-49149045 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 78

Conread position: 1-152
Cow position: chr11:65843240-65843086 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 40

Conread position: 1-153
Cow position: chr11:57170976-57170823 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 99, 18

Conread position: 1-153
Cow position: chr11:68909997-68909839 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 62

Conread position: 1-153
Cow position: chr11:71493002-71492853 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 1-153
Cow position: chr11:81174743-81174893 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 1-154
Cow position: chr11:1362624-1362460 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-154
Cow position: chr11:8545159-8545009 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 34

Conread position: 1-154
Cow position: chr11:9270874-9270717 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 90

Conread position: 1-154
Cow position: chr11:33310823-33310981 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 80

Conread position: 1-154
Cow position: chr11:83066348-83066504 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 99, 19

Conread position: 1-155
Cow position: chr11:8988374-8988221 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 18

Conread position: 1-155
Cow position: chr11:10076619-10076777 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 1-155
Cow position: chr11:13499867-13500024 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 82

Conread position: 1-155
Cow position: chr11:16907189-16907040 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position: chr11:17860301-17860147 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 100

Conread position: 1-155
Cow position: chr11:21852449-21852293 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 6

Conread position: 1-155
Cow position: chr11:23232661-23232507 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 77, 19

Conread position: 1-155
Cow position: chr11:33348332-33348178 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 120

Conread position: 1-155
Cow position: chr11:34032349-34032193 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position: chr11:40573479-40573323 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 19

Conread position: 1-155
Cow position: chr11:41176096-41175940 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 1-155
Cow position: chr11:41986191-41986037 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 41

Conread position: 1-155
Cow position: chr11:44642433-44642276 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 18

Conread position: 1-155
Cow position: chr11:53130664-53130822 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position: chr11:61958893-61958735 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 79

Conread position: 1-155
Cow position: chr11:75480175-75480011 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 1-155
Cow position: chr11:83196352-83196506 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 18

Conread position: 1-156
Cow position: chr11:377792-377632 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 92

Conread position: 1-156
Cow position: chr11:2083990-2084153 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position: chr11:2811875-2811720 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 19

Conread position: 1-156
Cow position: chr11:6202300-6202452 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 1-156
Cow position: chr11:7394995-7395147 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 64

Conread position: 1-156
Cow position: chr11:7590047-7590202 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 100, 18

Conread position: 1-156
Cow position: chr11:8339552-8339396 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 20

Conread position: 1-156
Cow position: chr11:10095200-10095353 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 35

Conread position: 1-156
Cow position: chr11:17831365-17831212 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 46

Conread position: 1-156
Cow position: chr11:18210492-18210338 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position: chr11:18244085-18243931 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 1-156
Cow position: chr11:19247344-19247189 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 74

Conread position: 1-156
Cow position: chr11:21428140-21427983 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 1-156
Cow position: chr11:23138208-23138045 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 82

Conread position: 1-156
Cow position: chr11:23586491-23586648 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 18

Conread position: 1-156
Cow position: chr11:26144245-26144086 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 74

Conread position: 1-156
Cow position: chr11:27386492-27386329 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position: chr11:28993878-28993728 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position: chr11:30596840-30597003 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 1-156
Cow position: chr11:30934277-30934430 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 77

Conread position: 1-156
Cow position: chr11:32693618-32693469 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-156
Cow position: chr11:33349845-33349691 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 80

Conread position: 1-156
Cow position: chr11:33754051-33753895 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 79

Conread position: 1-156
Cow position: chr11:34829928-34829769 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 46

Conread position: 1-156
Cow position: chr11:36112275-36112433 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 38

Conread position: 1-156
Cow position: chr11:36238637-36238790 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position: chr11:36286549-36286705 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 1-156
Cow position: chr11:36799449-36799297 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 1-156
Cow position: chr11:37804701-37804544 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 49

Conread position: 1-156
Cow position: chr11:38874550-38874392 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 1-156
Cow position: chr11:42083331-42083482 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 40

Conread position: 1-156
Cow position: chr11:45742235-45742387 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 48

Conread position: 1-156
Cow position: chr11:46746482-46746641 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 20

Conread position: 1-156
Cow position: chr11:48697300-48697458 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 61

Conread position: 1-156
Cow position: chr11:49057256-49057413 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 18

Conread position: 1-156
Cow position: chr11:49934884-49934721 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 1-156
Cow position: chr11:51626816-51626974 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-156
Cow position: chr11:51729142-51729296 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 18

Conread position: 1-156
Cow position: chr11:53778468-53778626 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 1-156
Cow position: chr11:56349162-56349013 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 1-156
Cow position: chr11:57724972-57724815 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 111

Conread position: 1-156
Cow position: chr11:59872785-59872940 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position: chr11:59902744-59902900 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-156
Cow position: chr11:63434202-63434048 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 21

Conread position: 1-156
Cow position: chr11:63435371-63435531 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position: chr11:63482573-63482416 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position: chr11:63499470-63499316 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 141

Conread position: 1-156
Cow position: chr11:66188467-66188307 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 18

Conread position: 1-156
Cow position: chr11:67246646-67246800 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 22

Conread position: 1-156
Cow position: chr11:67600636-67600794 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 18

Conread position: 1-156
Cow position: chr11:71008989-71009142 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 76

Conread position: 1-156
Cow position: chr11:72375832-72375673 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 20

Conread position: 1-156
Cow position: chr11:76114508-76114656 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position: chr11:78381201-78381051 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 37

Conread position: 1-156
Cow position: chr11:79728816-79728658 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 89

Conread position: 1-156
Cow position: chr11:85703559-85703712 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 1-156
Cow position: chr11:86926074-86925930 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-157
Cow position: chr11:38577920-38577764 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 62

Conread position: 1-157
Cow position: chr11:48649835-48649983 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 1-157
Cow position: chr11:73354201-73354050 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 1-159
Cow position: chr11:65435707-65435867 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 118

Conread position: 1-182
Cow position: chr11:65607837-65607654 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 95, 18

Conread position: 2-144
Cow position: chr11:71455646-71455791 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 86

Conread position: 2-151
Cow position: chr11:85764797-85764940 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 2-154
Cow position: chr11:32609857-32610006 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 2-155
Cow position: chr11:4663191-4663038 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 17

Conread position: 2-156
Cow position: chr11:58990364-58990512 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 43

Conread position: 2-156
Cow position: chr11:67804606-67804759 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 80

Conread position: 2-179
Cow position: chr11:18698732-18698911 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 17

Conread position: 3-140
Cow position: chr11:10837674-10837532 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 88

Conread position: 3-155
Cow position: chr11:17493334-17493487 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 16

Conread position: 3-156
Cow position: chr11:6234024-6233870 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 95, 25

Conread position: 3-156
Cow position: chr11:13043290-13043136 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 46

Conread position: 3-156
Cow position: chr11:37347332-37347488 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-156
Cow position: chr11:41134210-41134056 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 3-156
Cow position: chr11:41549480-41549324 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 16

Conread position: 3-156
Cow position: chr11:48474558-48474713 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 3-156
Cow position: chr11:48932729-48932577 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 3-156
Cow position: chr11:61246604-61246449 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 3-181
Cow position: chr11:5031919-5031742 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 155

Conread position: 4-155
Cow position: chr11:20602084-20602236 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 65

Conread position: 4-156
Cow position: chr11:32436188-32436344 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 45

Conread position: 4-181
Cow position: chr11:58588204-58588380 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 15

Conread position: 7-134
Cow position: chr11:62045255-62045384 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 22

Conread position: 7-140
Cow position: chr11:80369483-80369619 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 7-151
Cow position: chr11:15772855-15772707 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 13

Conread position: 7-156
Cow position: chr11:48306484-48306337 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 13

Conread position: 7-156
Cow position: chr11:49152811-49152959 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 34

Conread position: 7-156
Cow position: chr11:65826882-65826741 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 8-156
Cow position: chr11:19592131-19591985 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 8-156
Cow position: chr11:80530228-80530376 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 82

Conread position: 9-140
Cow position: chr11:68570805-68570675 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 9-150
Cow position: chr11:18399466-18399324 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 9-156
Cow position: chr11:70086189-70086344 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 9-157
Cow position: chr11:64638668-64638514 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 10-156
Cow position: chr11:21398826-21398972 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 40

Conread position: 10-156
Cow position: chr11:80756920-80756771 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 11-154
Cow position: chr11:70278245-70278105 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 11-156
Cow position: chr11:33468575-33468720 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-156
Cow position: chr11:52690659-52690510 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 80

Conread position: 12-137
Cow position: chr11:83925914-83926040 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 12-140
Cow position: chr11:6101473-6101604 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 49

Conread position: 12-144
Cow position: chr11:4391163-4391297 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 93, 37

Conread position: 12-148
Cow position: chr11:70756345-70756485 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 91, 67

Conread position: 12-149
Cow position: chr11:62979352-62979493 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 12-154
Cow position: chr11:43008442-43008300 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 91, 134

Conread position: 12-154
Cow position: chr11:71501268-71501124 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 78

Conread position: 12-155
Cow position: chr11:48042172-48042026 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 12-156
Cow position: chr11:3726152-3726298 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 74

Conread position: 12-156
Cow position: chr11:7460751-7460605 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 12-156
Cow position: chr11:18086470-18086330 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 12-156
Cow position: chr11:30543483-30543629 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 90

Conread position: 12-156
Cow position: chr11:31526604-31526457 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 12-156
Cow position: chr11:40478986-40478843 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 12-156
Cow position: chr11:42003081-42002938 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 79

Conread position: 12-156
Cow position: chr11:52983544-52983685 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 27

Conread position: 12-156
Cow position: chr11:57873693-57873837 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 78

Conread position: 12-156
Cow position: chr11:68913006-68913150 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 12-159
Cow position: chr11:70745663-70745524 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 12-165
Cow position: chr11:36672178-36672024 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 13-154
Cow position: chr11:63847714-63847854 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 13-155
Cow position: chr11:55333776-55333918 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 85

Conread position: 13-156
Cow position: chr11:21438080-21438218 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 13-179
Cow position: chr11:16540727-16540894 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 89, 25

Conread position: 14-147
Cow position: chr11:30110827-30110963 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 14-149
Cow position: chr11:34145049-34144911 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 14-155
Cow position: chr11:2309737-2309881 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 14-156
Cow position: chr11:36114028-36114166 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 23

Conread position: 14-156
Cow position: chr11:39118618-39118765 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 15-156
Cow position: chr11:71807704-71807561 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 130

Conread position: 16-154
Cow position: chr11:83000667-83000524 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 17-154
Cow position: chr11:36658952-36658811 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 17-156
Cow position: chr11:54334203-54334338 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 18-152
Cow position: chr11:26535646-26535777 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 18-156
Cow position: chr11:77705625-77705768 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 19-156
Cow position: chr11:11125533-11125673 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 22-156
Cow position: chr11:33345317-33345455 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 25-154
Cow position: chr11:18341164-18341033 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 123

Conread position: 41-156
Cow position: chr11:75965757-75965642 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 46-151
Cow position: chr11:36066321-36066216 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.