Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
| Conread position: | 1-122 |
| Cow position: | chr13:37517022-37517145 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-132 |
| Cow position: | chr13:20378221-20378356 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-139 |
| Cow position: | chr13:22030205-22030071 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 1-141 |
| Cow position: | chr13:51108609-51108464 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-141 |
| Cow position: | chr13:55947888-55947746 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-144 |
| Cow position: | chr13:41154918-41155064 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 1-147 |
| Cow position: | chr13:5091551-5091702 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 99, 129 |
| Conread position: | 1-147 |
| Cow position: | chr13:11321502-11321647 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 1-149 |
| Cow position: | chr13:52749364-52749509 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-150 |
| Cow position: | chr13:2774241-2774095 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-150 |
| Cow position: | chr13:20174864-20174713 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 1-152 |
| Cow position: | chr13:43184758-43184913 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 1-153 |
| Cow position: | chr13:6389494-6389343 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 1-153 |
| Cow position: | chr13:37981633-37981785 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 1-153 |
| Cow position: | chr13:49805085-49804934 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 140, 129 |
| Conread position: | 1-154 |
| Cow position: | chr13:9643772-9643927 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 1-154 |
| Cow position: | chr13:15195090-15195249 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-154 |
| Cow position: | chr13:16024705-16024549 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-154 |
| Cow position: | chr13:26743240-26743086 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 93 |
| Conread position: | 1-155 |
| Cow position: | chr13:1042851-1043010 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-155 |
| Cow position: | chr13:4420461-4420301 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-155 |
| Cow position: | chr13:9974959-9975115 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 1-155 |
| Cow position: | chr13:11061101-11060947 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 1-155 |
| Cow position: | chr13:17158761-17158917 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1-155 |
| Cow position: | chr13:24715358-24715201 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-155 |
| Cow position: | chr13:60429960-60430121 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:1363808-1363652 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 1-156 |
| Cow position: | chr13:2404853-2404709 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:2414144-2413987 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:2803583-2803430 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 1-156 |
| Cow position: | chr13:5758227-5758384 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-156 |
| Cow position: | chr13:7076371-7076215 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 1-156 |
| Cow position: | chr13:7488653-7488499 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 1-156 |
| Cow position: | chr13:7663310-7663464 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 1-156 |
| Cow position: | chr13:8524507-8524660 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 11 |
| Conread position: | 1-156 |
| Cow position: | chr13:8609437-8609589 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 1-156 |
| Cow position: | chr13:12875858-12876017 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 1-156 |
| Cow position: | chr13:14576320-14576171 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-156 |
| Cow position: | chr13:15281823-15281982 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:15991113-15991271 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 1-156 |
| Cow position: | chr13:17622395-17622246 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:18166847-18166690 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-156 |
| Cow position: | chr13:18243977-18243820 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:18995242-18995080 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:20128781-20128624 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:21039484-21039645 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:21275969-21275817 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 98, 45 |
| Conread position: | 1-156 |
| Cow position: | chr13:23270097-23270251 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 1-156 |
| Cow position: | chr13:25435006-25435165 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 1-156 |
| Cow position: | chr13:25579073-25579232 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 1-156 |
| Cow position: | chr13:28552710-28552546 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:36771305-36771464 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 98, 146 |
| Conread position: | 1-156 |
| Cow position: | chr13:37381920-37381759 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:43762283-43762126 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 1-156 |
| Cow position: | chr13:48251870-48252014 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-156 |
| Cow position: | chr13:50713316-50713168 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 1-156 |
| Cow position: | chr13:51015070-51015221 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 1-156 |
| Cow position: | chr13:52284923-52284766 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 1-156 |
| Cow position: | chr13:56678129-56677971 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 1-156 |
| Cow position: | chr13:60974197-60974033 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-156 |
| Cow position: | chr13:61990222-61990377 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr13:10988961-10989117 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-157 |
| Cow position: | chr13:15974728-15974576 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 1-160 |
| Cow position: | chr13:28696195-28696039 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-179 |
| Cow position: | chr13:12207159-12206984 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 1-179 |
| Cow position: | chr13:51940850-51940670 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 1-181 |
| Cow position: | chr13:20839677-20839500 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-182 |
| Cow position: | chr13:6079305-6079479 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-205 |
| Cow position: | chr13:53536192-53536396 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 2-144 |
| Cow position: | chr13:54093858-54093715 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 2-151 |
| Cow position: | chr13:15192777-15192925 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-153 |
| Cow position: | chr13:20580019-20579869 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 2-155 |
| Cow position: | chr13:53070057-53070206 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:2192825-2192670 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:10845706-10845554 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 2-156 |
| Cow position: | chr13:12546797-12546950 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 100, 89 |
| Conread position: | 2-156 |
| Cow position: | chr13:19188414-19188259 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:19223758-19223605 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:23512480-23512328 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:47322291-47322452 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2-156 |
| Cow position: | chr13:57475303-57475460 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-157 |
| Cow position: | chr13:3315564-3315718 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 3-156 |
| Cow position: | chr13:6153670-6153826 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 3-156 |
| Cow position: | chr13:14771569-14771410 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 3-156 |
| Cow position: | chr13:14870641-14870490 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 3-156 |
| Cow position: | chr13:25381074-25380921 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 4-136 |
| Cow position: | chr13:21193521-21193395 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 4-153 |
| Cow position: | chr13:25531677-25531831 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 4-156 |
| Cow position: | chr13:1569034-1568882 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 4-156 |
| Cow position: | chr13:13954277-13954435 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 4-156 |
| Cow position: | chr13:39368066-39367921 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 4-157 |
| Cow position: | chr13:15110431-15110272 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 97, 155 |
| Conread position: | 5-156 |
| Cow position: | chr13:15041363-15041515 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 97, 120 |
| Conread position: | 6-141 |
| Cow position: | chr13:6113195-6113331 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 6-154 |
| Cow position: | chr13:36346081-36345936 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 7-140 |
| Cow position: | chr13:20041859-20041996 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 7-149 |
| Cow position: | chr13:45726004-45725860 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 7-155 |
| Cow position: | chr13:13338968-13338815 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-156 |
| Cow position: | chr13:11591854-11591707 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 7-156 |
| Cow position: | chr13:19240544-19240387 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 7-156 |
| Cow position: | chr13:20683052-20682907 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-179 |
| Cow position: | chr13:60389379-60389552 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 9-153 |
| Cow position: | chr13:25695664-25695807 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 9-156 |
| Cow position: | chr13:12614362-12614210 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 10-156 |
| Cow position: | chr13:19178380-19178230 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 11-156 |
| Cow position: | chr13:24230314-24230172 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-179 |
| Cow position: | chr13:24753985-24753823 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 12-155 |
| Cow position: | chr13:6974264-6974120 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 12-155 |
| Cow position: | chr13:8555562-8555419 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-155 |
| Cow position: | chr13:15621918-15621769 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 88, 140 |
| Conread position: | 12-156 |
| Cow position: | chr13:620157-620295 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 12-156 |
| Cow position: | chr13:1779933-1779787 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 12-156 |
| Cow position: | chr13:11096277-11096137 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 12-156 |
| Cow position: | chr13:17613447-17613299 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 12-156 |
| Cow position: | chr13:20649880-20650028 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-156 |
| Cow position: | chr13:29831333-29831473 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-156 |
| Cow position: | chr13:34728738-34728889 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-156 |
| Cow position: | chr13:42114122-42113977 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 95 |
| Conread position: | 12-156 |
| Cow position: | chr13:46516164-46516019 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 12-194 |
| Cow position: | chr13:16014913-16014732 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 13-152 |
| Cow position: | chr13:25547483-25547620 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-155 |
| Cow position: | chr13:12282937-12282798 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:8652336-8652484 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:10924810-10924963 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:13176754-13176608 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:21155390-21155536 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 13-156 |
| Cow position: | chr13:26480110-26480252 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 13-156 |
| Cow position: | chr13:47964094-47964230 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 14-136 |
| Cow position: | chr13:15869224-15869101 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 86, 100 |
| Conread position: | 14-155 |
| Cow position: | chr13:46736314-46736174 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 14-156 |
| Cow position: | chr13:30026214-30026067 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 15-153 |
| Cow position: | chr13:16711727-16711588 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 16-155 |
| Cow position: | chr13:37592843-37592987 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 16-156 |
| Cow position: | chr13:15446142-15445999 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 18-142 |
| Cow position: | chr13:13809463-13809591 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 24-156 |
| Cow position: | chr13:16187806-16187938 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 26-155 |
| Cow position: | chr13:17110309-17110178 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 27-156 |
| Cow position: | chr13:29802934-29802803 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 34-156 |
| Cow position: | chr13:46112048-46111923 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 49-156 |
| Cow position: | chr13:17563803-17563697 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 58-155 |
| Cow position: | chr13:12925831-12925735 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.