Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-122
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 1-132
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 1-139
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 86

Conread position: 1-141
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 1-144
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 18

Conread position: 1-147
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 129

Conread position: 1-147
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 18

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-150
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 37

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 18

Conread position: 1-153
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 21

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 36

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 140, 129

Conread position: 1-154
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 59

Conread position: 1-154
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-154
Cow position:
Alignm length: 157
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 1-154
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 93

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 8, 91

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 83

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 21

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 87

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 48

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 20

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 58

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 11

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 11

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 98, 48

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 129
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 135

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 45

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 77

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 51

Conread position: 1-156
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 146

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 87

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 49

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 86

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 49

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 44

Conread position: 1-156
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-157
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 124

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-179
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 90

Conread position: 1-179
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 107, 18

Conread position: 1-181
Cow position:
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-205
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 18

Conread position: 2-144
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 2-151
Cow position:
Alignm length: 150
Alignm identity: 125
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 2-153
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 39

Conread position: 2-155
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 18

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 89

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 2-156
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 2-156
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 2-156
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 2-156
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 2-157
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 3-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 3-156
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 90

Conread position: 3-156
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 75

Conread position: 3-156
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 94

Conread position: 4-136
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 35

Conread position: 4-153
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 15

Conread position: 4-156
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 15

Conread position: 4-156
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 90

Conread position: 4-156
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 46

Conread position: 4-157
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 155

Conread position: 5-156
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 120

Conread position: 6-141
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 93, 62

Conread position: 6-154
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 128

Conread position: 7-140
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 62

Conread position: 7-149
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 7-155
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 41

Conread position: 7-156
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 7-156
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 7-179
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 90

Conread position: 9-153
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 69

Conread position: 9-156
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 10-156
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 11-156
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 11-179
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 12-155
Cow position:
Alignm length: 145
Alignm identity: 119
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 12-155
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-155
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 140

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 39

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 12-156
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 79

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 12-156
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 95

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 12-194
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 50

Conread position: 13-152
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 13-155
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 13-156
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 13-156
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 13-156
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 13-156
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 13-156
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 17

Conread position: 13-156
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 14-136
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 86, 100

Conread position: 14-155
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 14-156
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 15-153
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 16-155
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 16-156
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 18-142
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 24-156
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 8

Conread position: 26-155
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 19

Conread position: 27-156
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 34-156
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 49-156
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 58-155
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.