Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-129
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 126

Conread position: 1-137
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 18

Conread position: 1-138
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 91

Conread position: 1-138
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 1-139
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 50

Conread position: 1-140
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 108, 77

Conread position: 1-140
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 1-140
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 30

Conread position: 1-140
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 18

Conread position: 1-143
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 1-144
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 18, 37

Conread position: 1-148
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-151
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 97, 18

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 1-153
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-153
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-154
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 18

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 18

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 147

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 18

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 8, 113

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 58

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 21

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 80

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 93

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 103, 57

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 54

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 86

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 20

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 66

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 74, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 1-156
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 40

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 27

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 131
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 102, 97

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 55

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 87

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 50

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 74

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 1-171
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 18

Conread position: 2-148
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 19

Conread position: 2-150
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 77

Conread position: 2-156
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 2-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 49

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 63

Conread position: 3-138
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 3-154
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 3-155
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 76, 16

Conread position: 4-156
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 4-157
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 83

Conread position: 4-181
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 15

Conread position: 5-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 7-135
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 84

Conread position: 7-151
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 97, 15

Conread position: 7-156
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 72

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 135, 59

Conread position: 7-156
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 7-156
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 94

Conread position: 9-153
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 11

Conread position: 9-156
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 13

Conread position: 10-154
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 12-154
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 137

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 75

Conread position: 12-155
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 96

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 80

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 27

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 48

Conread position: 12-156
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 106

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 66, 76

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 12-156
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 67

Conread position: 12-181
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 154

Conread position: 13-130
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 13-140
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 13-155
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 139

Conread position: 13-155
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 8

Conread position: 13-155
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 47

Conread position: 13-156
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 109

Conread position: 13-156
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 13-156
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-156
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-156
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 77

Conread position: 13-156
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 97

Conread position: 13-181
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 136

Conread position: 14-154
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 14-156
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 35

Conread position: 14-156
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 63

Conread position: 14-156
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 55

Conread position: 15-156
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 111

Conread position: 18-155
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 21-156
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 21-156
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 23-153
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 37

Conread position: 25-156
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.