Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-135
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 1-136
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 20

Conread position: 1-136
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 47

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 108

Conread position: 1-147
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 11

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 18

Conread position: 1-152
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 90

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-154
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 20

Conread position: 1-154
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 18

Conread position: 1-154
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 20

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-154
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 1-154
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 72

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 18

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 123

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 95

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 145

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 134

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 64

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 17

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 18

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 49

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 129
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 49

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 20

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 46

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 85, 19

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 94

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 79

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 90

Conread position: 1-156
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 103

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 20

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 63

Conread position: 1-156
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 117

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 101

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-156
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 86

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 18

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 33

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 37

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 64

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 55

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 78

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 104, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 21

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 70

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 103

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 86

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-179
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 166

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 59

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 47

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 47

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 2-156
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 17

Conread position: 2-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 88

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 2-156
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 75

Conread position: 3-153
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 85

Conread position: 3-154
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 3-155
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 95, 18

Conread position: 3-156
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-156
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 47

Conread position: 3-156
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 3-156
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 4-155
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 15

Conread position: 6-153
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-179
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 41

Conread position: 7-156
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 114

Conread position: 8-156
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 31

Conread position: 10-155
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 10-156
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 95, 77

Conread position: 11-156
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 12-140
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 51

Conread position: 12-152
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 33

Conread position: 12-155
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 0

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 122

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 33

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 12-156
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 13-140
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 50

Conread position: 13-154
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 13-156
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 41

Conread position: 13-156
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 52

Conread position: 13-156
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 53

Conread position: 14-140
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 14-152
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 14-154
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 42

Conread position: 14-156
Cow position:
Alignm length: 144
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 14-156
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 15-152
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 15-154
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 75

Conread position: 15-155
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 61

Conread position: 15-156
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 16-155
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 16-156
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 16-156
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 16-156
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 62

Conread position: 22-155
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 57

Conread position: 22-156
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 54

Conread position: 25-155
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 51

Conread position: 25-156
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 84, 54

Conread position: 27-156
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 54-156
Cow position:
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.