Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-135
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 1-138
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 11

Conread position: 1-139
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 38

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 123

Conread position: 1-140
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-140
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 11

Conread position: 1-150
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-152
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 18

Conread position: 1-152
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 96

Conread position: 1-153
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 145

Conread position: 1-154
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 20

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 1-154
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 27

Conread position: 1-154
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 67

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 49

Conread position: 1-155
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 61

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 18

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 49

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 109

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 36

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 66

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 30

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 92

Conread position: 1-156
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 34

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 133

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 116, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 137

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 132, 18

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 66

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 78

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 105

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 105

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 105

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 96

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 66

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 109

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 1-159
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-160
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 103, 18

Conread position: 1-160
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-179
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 90

Conread position: 1-180
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 141, 58

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 18

Conread position: 1-181
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 2-155
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 90

Conread position: 2-156
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 132

Conread position: 2-156
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 2-156
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 89

Conread position: 2-156
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-155
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 16

Conread position: 3-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 4-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 15

Conread position: 4-156
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 4-156
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 4-156
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 4-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 131

Conread position: 4-156
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 84

Conread position: 7-153
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 138, 83

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 60

Conread position: 7-156
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 9-140
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 9-144
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 9-156
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 48

Conread position: 9-156
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 40

Conread position: 9-156
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 132, 40

Conread position: 11-156
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 11-156
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 12-154
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 78

Conread position: 12-154
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 12-156
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 36

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 23

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 129, 67

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 12-179
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 99

Conread position: 13-139
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 13-140
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 13-143
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 13-155
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 13-156
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 132

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 14-130
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 14-151
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 14-156
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 14-156
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 64

Conread position: 15-155
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 16-156
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 16-156
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 101

Conread position: 17-156
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 18-155
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 98

Conread position: 25-156
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.