Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-121
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 20

Conread position: 1-136
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 45

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 1-140
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 89

Conread position: 1-140
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 1-143
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 19

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 94

Conread position: 1-150
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 11

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 1-152
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 18

Conread position: 1-152
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 58

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 89

Conread position: 1-153
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 1-154
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-154
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 1-154
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 20

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 18

Conread position: 1-155
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 46, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 80

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 90

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 19

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 20

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 18

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 49

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 47

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 102, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 40

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 47

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 45

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 89, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 94

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 20

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 86, 21

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 80

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 68

Conread position: 1-156
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 90

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 1-156
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 1-156
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 22

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-158
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 102, 19

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 19, 35

Conread position: 1-179
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 17

Conread position: 1-181
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 18

Conread position: 1-185
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 167

Conread position: 2-144
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 2-154
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 2-155
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 2-156
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 2-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 91

Conread position: 2-156
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 17

Conread position: 3-155
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 16

Conread position: 3-155
Cow position:
Alignm length: 159
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 88

Conread position: 3-156
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 46

Conread position: 3-156
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 16

Conread position: 4-141
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 98, 0

Conread position: 4-155
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 4-156
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 4-156
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 19

Conread position: 4-156
Cow position:
Alignm length: 156
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 51

Conread position: 6-155
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 45

Conread position: 7-146
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 7-153
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 7-156
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 7-156
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 7-156
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 0

Conread position: 7-156
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 8-156
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 72

Conread position: 9-154
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 9-155
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 47

Conread position: 9-156
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 53

Conread position: 10-137
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 10-153
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 81

Conread position: 10-156
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 11-156
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 29, 0

Conread position: 12-140
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 78

Conread position: 12-153
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 12-153
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 134

Conread position: 12-155
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 137

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 12-156
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 25

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 12-175
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 13-156
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 13-156
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 13-156
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 35

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 15-155
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 13

Conread position: 15-156
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 15-157
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 17-156
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 82, 61

Conread position: 18-155
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 20-140
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 21-138
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 21-143
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 21-156
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 55

Conread position: 23-155
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 23-155
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 86

Conread position: 23-156
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 38-156
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Show alignments to all cow chromosomes.