Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
| Conread position: | 1-130 |
| Cow position: | chr21:15544283-15544155 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-137 |
| Cow position: | chr21:4568220-4568357 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 1-137 |
| Cow position: | chr21:21480244-21480112 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 1-137 |
| Cow position: | chr21:39401529-39401667 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-138 |
| Cow position: | chr21:2785841-2785703 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 20 |
| Conread position: | 1-144 |
| Cow position: | chr21:28617522-28617670 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-149 |
| Cow position: | chr21:1464163-1464314 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-149 |
| Cow position: | chr21:6997873-6998026 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-149 |
| Cow position: | chr21:8985481-8985636 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 1-150 |
| Cow position: | chr21:33360099-33359950 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 89 |
| Conread position: | 1-151 |
| Cow position: | chr21:13898119-13898274 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-152 |
| Cow position: | chr21:3236459-3236613 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 1-152 |
| Cow position: | chr21:28882067-28882225 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-153 |
| Cow position: | chr21:41140783-41140629 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-153 |
| Cow position: | chr21:43357326-43357166 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 1-154 |
| Cow position: | chr21:395805-395957 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-154 |
| Cow position: | chr21:5898464-5898312 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 1-154 |
| Cow position: | chr21:10561649-10561494 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 1-154 |
| Cow position: | chr21:13365273-13365432 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 1-154 |
| Cow position: | chr21:17183855-17184006 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 128 |
| Conread position: | 1-154 |
| Cow position: | chr21:34391040-34390886 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-154 |
| Cow position: | chr21:38900713-38900863 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-154 |
| Cow position: | chr21:41155798-41155954 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 1-155 |
| Cow position: | chr21:33655-33809 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 91 |
| Conread position: | 1-155 |
| Cow position: | chr21:1059012-1059169 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 98, 124 |
| Conread position: | 1-155 |
| Cow position: | chr21:5426874-5427030 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-155 |
| Cow position: | chr21:5636783-5636630 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 1-155 |
| Cow position: | chr21:6051442-6051593 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-155 |
| Cow position: | chr21:6102326-6102171 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 1-155 |
| Cow position: | chr21:12154072-12154221 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 1-155 |
| Cow position: | chr21:14452171-14452324 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 24 |
| Conread position: | 1-155 |
| Cow position: | chr21:20925572-20925415 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 125 |
| Conread position: | 1-155 |
| Cow position: | chr21:25382948-25383115 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-155 |
| Cow position: | chr21:32339803-32339650 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 99, 108 |
| Conread position: | 1-155 |
| Cow position: | chr21:32535909-32536067 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-155 |
| Cow position: | chr21:38449512-38449355 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 6 |
| Conread position: | 1-155 |
| Cow position: | chr21:39450230-39450071 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 1-155 |
| Cow position: | chr21:46552171-46552013 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:1511226-1511384 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 1-156 |
| Cow position: | chr21:1591487-1591645 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:3361077-3360925 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 1-156 |
| Cow position: | chr21:3763806-3763651 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 1-156 |
| Cow position: | chr21:3813548-3813392 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 1-156 |
| Cow position: | chr21:4281937-4281784 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:5985383-5985227 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 1-156 |
| Cow position: | chr21:6833983-6834140 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:7581971-7581814 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:8527542-8527393 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 1-156 |
| Cow position: | chr21:9416181-9416341 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:10001009-10001166 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:10263968-10264124 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 1-156 |
| Cow position: | chr21:10633706-10633546 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:10727212-10727368 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 1-156 |
| Cow position: | chr21:11359974-11360127 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:12462035-12461876 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:13048262-13048102 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 1-156 |
| Cow position: | chr21:15584484-15584328 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 1-156 |
| Cow position: | chr21:15911334-15911494 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:15976567-15976724 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 1-156 |
| Cow position: | chr21:18790625-18790471 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:19210649-19210805 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:19258764-19258913 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:20418750-20418591 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:21169560-21169401 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:22121457-22121600 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:22720162-22720319 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 99, 20 |
| Conread position: | 1-156 |
| Cow position: | chr21:23586815-23586973 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 1-156 |
| Cow position: | chr21:23980247-23980091 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 1-156 |
| Cow position: | chr21:24222603-24222446 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:25628977-25628819 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 1-156 |
| Cow position: | chr21:26244855-26245005 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:27863581-27863422 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 1-156 |
| Cow position: | chr21:28244404-28244561 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:28924049-28924200 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 37 |
| Conread position: | 1-156 |
| Cow position: | chr21:28989549-28989701 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 1-156 |
| Cow position: | chr21:29978821-29978669 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:31253478-31253628 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:33562948-33563099 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:34722851-34722697 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:36756533-36756691 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 73 |
| Conread position: | 1-156 |
| Cow position: | chr21:36909869-36910022 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:37345166-37345010 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 1-156 |
| Cow position: | chr21:39888813-39888658 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 1-156 |
| Cow position: | chr21:40266056-40266216 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:40432384-40432536 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:41621059-41621216 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:41974440-41974283 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:45915772-45915623 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:47764180-47764026 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr21:47802322-47802168 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-156 |
| Cow position: | chr21:49700101-49699949 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 1-181 |
| Cow position: | chr21:22210309-22210131 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 2-154 |
| Cow position: | chr21:36795536-36795692 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 2-154 |
| Cow position: | chr21:45921122-45920969 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 2-155 |
| Cow position: | chr21:957608-957763 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 2-155 |
| Cow position: | chr21:5455057-5454901 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-156 |
| Cow position: | chr21:42384445-42384599 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-130 |
| Cow position: | chr21:14760510-14760639 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 3-132 |
| Cow position: | chr21:18494906-18495039 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 3-156 |
| Cow position: | chr21:46974-47131 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 3-156 |
| Cow position: | chr21:3818144-3818300 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 3-156 |
| Cow position: | chr21:45971236-45971079 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-147 |
| Cow position: | chr21:24765226-24765364 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 4-156 |
| Cow position: | chr21:3381146-3380987 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-156 |
| Cow position: | chr21:41597757-41597902 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 5-156 |
| Cow position: | chr21:24642458-24642612 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 7-154 |
| Cow position: | chr21:37014462-37014317 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 7-156 |
| Cow position: | chr21:11250819-11250964 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 7-156 |
| Cow position: | chr21:30607148-30606996 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 7-156 |
| Cow position: | chr21:45866870-45867025 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 9-128 |
| Cow position: | chr21:14228628-14228504 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 9-155 |
| Cow position: | chr21:17193811-17193661 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 9-156 |
| Cow position: | chr21:10118501-10118650 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 121 |
| Conread position: | 9-156 |
| Cow position: | chr21:46463463-46463614 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 11-156 |
| Cow position: | chr21:43259167-43259310 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 12-140 |
| Cow position: | chr21:7391331-7391202 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 98 |
| Conread position: | 12-142 |
| Cow position: | chr21:31676444-31676576 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 12-153 |
| Cow position: | chr21:41579701-41579844 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 65 |
| Conread position: | 12-154 |
| Cow position: | chr21:4399748-4399892 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 115 |
| Conread position: | 12-155 |
| Cow position: | chr21:47363793-47363646 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-156 |
| Cow position: | chr21:977199-977057 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 12-156 |
| Cow position: | chr21:9698138-9697989 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 12-156 |
| Cow position: | chr21:17890248-17890393 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 12-156 |
| Cow position: | chr21:28810317-28810171 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 65 |
| Conread position: | 12-156 |
| Cow position: | chr21:45330656-45330512 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 12-156 |
| Cow position: | chr21:47714058-47713913 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 13-140 |
| Cow position: | chr21:27743693-27743824 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 13-153 |
| Cow position: | chr21:868979-868836 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 66 |
| Conread position: | 13-155 |
| Cow position: | chr21:3585417-3585278 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 13-155 |
| Cow position: | chr21:9302481-9302337 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 118 |
| Conread position: | 13-156 |
| Cow position: | chr21:10114387-10114239 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 13-156 |
| Cow position: | chr21:17175097-17175238 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 13-156 |
| Cow position: | chr21:33997281-33997136 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 13-157 |
| Cow position: | chr21:41878417-41878563 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 14-155 |
| Cow position: | chr21:10673075-10673211 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 14-156 |
| Cow position: | chr21:10004940-10004794 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-140 |
| Cow position: | chr21:28733966-28733837 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-143 |
| Cow position: | chr21:42913797-42913665 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 15-154 |
| Cow position: | chr21:36910688-36910826 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 15-156 |
| Cow position: | chr21:8235606-8235464 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 15-156 |
| Cow position: | chr21:10410168-10410315 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 15-156 |
| Cow position: | chr21:20152902-20153047 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 15-156 |
| Cow position: | chr21:28919576-28919432 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-157 |
| Cow position: | chr21:38664585-38664731 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 17-156 |
| Cow position: | chr21:30231741-30231603 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 20-156 |
| Cow position: | chr21:19513818-19513956 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 20-156 |
| Cow position: | chr21:21907476-21907339 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 114 |
| Conread position: | 22-181 |
| Cow position: | chr21:13585098-13584946 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 26-155 |
| Cow position: | chr21:40589526-40589392 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 30-156 |
| Cow position: | chr21:20160641-20160767 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.