Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-138
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 47

Conread position: 1-140
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 22

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 1-142
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-143
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 1-144
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 62

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 1-150
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 66

Conread position: 1-153
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 1-154
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 1-154
Cow position:
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 1-154
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 30

Conread position: 1-154
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 18

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 91

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 61

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 97, 47

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 19

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 77

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 79

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 79

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 101

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 79

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 106, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 79

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 17

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 38

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 104

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 100, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 140, 18

Conread position: 1-156
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 101

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 76

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 70

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 19

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 18

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 106

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 1-156
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 20

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 141, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 95, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 108, 11

Conread position: 1-156
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 55

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1-157
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-181
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 22

Conread position: 1-181
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 49

Conread position: 2-144
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 17

Conread position: 2-154
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 47

Conread position: 2-155
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 17

Conread position: 2-155
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 2-155
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 2-156
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 2-156
Cow position:
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 18

Conread position: 2-156
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 17

Conread position: 2-156
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 17

Conread position: 3-151
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 97, 66

Conread position: 3-153
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 77

Conread position: 3-154
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 63

Conread position: 3-155
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 3-155
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 19

Conread position: 3-155
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 3-156
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 3-156
Cow position:
Alignm length: 154
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-156
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 97, 42

Conread position: 3-163
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 112

Conread position: 4-155
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 15

Conread position: 4-155
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 86

Conread position: 6-156
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 66

Conread position: 7-153
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 7-154
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 7-155
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 7-156
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 7-156
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 8-155
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 83

Conread position: 9-143
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 9-153
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 9-155
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 12

Conread position: 9-156
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 90, 70

Conread position: 10-156
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 12-126
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 12-140
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-143
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 12-148
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-152
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 12-155
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 12-155
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 123

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 87, 133

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 44

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 23

Conread position: 12-157
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 112

Conread position: 12-157
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 12-159
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 13-140
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 13-153
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 135

Conread position: 13-156
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 77

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 13-156
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 46

Conread position: 13-156
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 13-156
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 13-156
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 73, 87

Conread position: 14-148
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 14-155
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-155
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 72

Conread position: 14-156
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 14-156
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 99

Conread position: 14-156
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 79

Conread position: 15-140
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-155
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 18

Conread position: 15-156
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 63

Conread position: 15-156
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 15-156
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 15-157
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 16-133
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-153
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 84

Conread position: 21-155
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 21-156
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 58

Conread position: 27-156
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 64

Show alignments to all cow chromosomes.