Cow genome map
Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
Conread position: | 1-119 |
Cow position: | chr24:41423456-41423573 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-130 |
Cow position: | chr24:27207348-27207218 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 1-136 |
Cow position: | chr24:17832967-17832832 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-136 |
Cow position: | chr24:18695466-18695602 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 1-138 |
Cow position: | chr24:24137010-24136876 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 56, 78 |
Conread position: | 1-139 |
Cow position: | chr24:27719908-27719772 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 130, 18 |
Conread position: | 1-140 |
Cow position: | chr24:27149242-27149386 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 1-140 |
Cow position: | chr24:27967925-27968071 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 120 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 82, 18 |
Conread position: | 1-140 |
Cow position: | chr24:30226787-30226927 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 1-140 |
Cow position: | chr24:36486211-36486078 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 1-151 |
Cow position: | chr24:27552742-27552892 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-151 |
Cow position: | chr24:42007586-42007738 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 1-152 |
Cow position: | chr24:32204947-32204796 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 101, 20 |
Conread position: | 1-153 |
Cow position: | chr24:15861754-15861598 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 1-153 |
Cow position: | chr24:18390442-18390292 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 1-153 |
Cow position: | chr24:18485150-18484994 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 98, 18 |
Conread position: | 1-154 |
Cow position: | chr24:28721738-28721890 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-154 |
Cow position: | chr24:29595964-29595808 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 123 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 1-154 |
Cow position: | chr24:31159464-31159620 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 70, 18 |
Conread position: | 1-154 |
Cow position: | chr24:39218996-39218839 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 129 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 19, 82 |
Conread position: | 1-155 |
Cow position: | chr24:3493739-3493886 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-155 |
Cow position: | chr24:18331571-18331720 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-155 |
Cow position: | chr24:28699904-28700052 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 104, 47 |
Conread position: | 1-155 |
Cow position: | chr24:32054506-32054663 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 130 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 1-155 |
Cow position: | chr24:33465761-33465616 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-155 |
Cow position: | chr24:33944251-33944403 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 101, 19 |
Conread position: | 1-155 |
Cow position: | chr24:43432639-43432792 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 123 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 141, 0 |
Conread position: | 1-156 |
Cow position: | chr24:2675169-2675318 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-156 |
Cow position: | chr24:7913849-7914009 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-156 |
Cow position: | chr24:7917518-7917358 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 1-156 |
Cow position: | chr24:16895589-16895434 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 124 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 77, 19 |
Conread position: | 1-156 |
Cow position: | chr24:17752266-17752109 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 102, 28 |
Conread position: | 1-156 |
Cow position: | chr24:17955596-17955441 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 127 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 10, 101 |
Conread position: | 1-156 |
Cow position: | chr24:18017074-18017230 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 1-156 |
Cow position: | chr24:18741724-18741569 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-156 |
Cow position: | chr24:18970661-18970505 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 127 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 148, 0 |
Conread position: | 1-156 |
Cow position: | chr24:18999894-19000050 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 30, 73 |
Conread position: | 1-156 |
Cow position: | chr24:19535405-19535253 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-156 |
Cow position: | chr24:19800693-19800850 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 89, 57 |
Conread position: | 1-156 |
Cow position: | chr24:20943014-20943171 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 98, 18 |
Conread position: | 1-156 |
Cow position: | chr24:27052649-27052491 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 1-156 |
Cow position: | chr24:27290715-27290874 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 20, 64 |
Conread position: | 1-156 |
Cow position: | chr24:27906285-27906441 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 124 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 108, 37 |
Conread position: | 1-156 |
Cow position: | chr24:28253553-28253710 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 97, 11 |
Conread position: | 1-156 |
Cow position: | chr24:32070813-32070966 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 52, 18 |
Conread position: | 1-156 |
Cow position: | chr24:34008731-34008570 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 1-156 |
Cow position: | chr24:34396327-34396176 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-156 |
Cow position: | chr24:34532974-34533118 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 1-156 |
Cow position: | chr24:34742602-34742756 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 102, 18 |
Conread position: | 1-156 |
Cow position: | chr24:35073939-35074096 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 99, 126 |
Conread position: | 1-156 |
Cow position: | chr24:35576688-35576535 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 58, 139 |
Conread position: | 1-156 |
Cow position: | chr24:35794889-35794732 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 99, 18 |
Conread position: | 1-156 |
Cow position: | chr24:42825647-42825495 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-156 |
Cow position: | chr24:43364206-43364364 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 103, 68 |
Conread position: | 1-158 |
Cow position: | chr24:25524894-25525046 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 104, 117 |
Conread position: | 1-169 |
Cow position: | chr24:34315199-34315372 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 2-140 |
Cow position: | chr24:31382742-31382888 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 2-144 |
Cow position: | chr24:16509818-16509961 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 2-155 |
Cow position: | chr24:29673367-29673524 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 100, 90 |
Conread position: | 2-155 |
Cow position: | chr24:44041165-44041003 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 2-156 |
Cow position: | chr24:352757-352603 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 85, 17 |
Conread position: | 2-156 |
Cow position: | chr24:28553699-28553551 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 125 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 3-156 |
Cow position: | chr24:24457397-24457247 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 122 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 100, 62 |
Conread position: | 3-156 |
Cow position: | chr24:30484102-30483945 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 124 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 3-165 |
Cow position: | chr24:34782937-34782774 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 128 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 101, 144 |
Conread position: | 7-181 |
Cow position: | chr24:32370066-32369888 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 8-155 |
Cow position: | chr24:16645470-16645318 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 9-156 |
Cow position: | chr24:10125726-10125877 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 11-155 |
Cow position: | chr24:28289393-28289251 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 12-152 |
Cow position: | chr24:41985847-41985995 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 87, 71 |
Conread position: | 12-154 |
Cow position: | chr24:40129984-40130130 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 12-155 |
Cow position: | chr24:11840043-11840189 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 121 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 32, 81 |
Conread position: | 12-155 |
Cow position: | chr24:40850021-40850163 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 12-156 |
Cow position: | chr24:10841355-10841204 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 12-156 |
Cow position: | chr24:27874459-27874598 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 12-156 |
Cow position: | chr24:29679446-29679307 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 96, 36 |
Conread position: | 12-156 |
Cow position: | chr24:30545002-30544859 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 12-156 |
Cow position: | chr24:39905592-39905453 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 12-179 |
Cow position: | chr24:26732312-26732475 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 94, 24 |
Conread position: | 13-156 |
Cow position: | chr24:5838-5695 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 131, 85 |
Conread position: | 13-156 |
Cow position: | chr24:17104714-17104567 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 13-156 |
Cow position: | chr24:24662271-24662128 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 92, 25 |
Conread position: | 13-156 |
Cow position: | chr24:29170828-29170966 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 14-152 |
Cow position: | chr24:3152721-3152580 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 88, 67 |
Conread position: | 14-156 |
Cow position: | chr24:38006846-38006705 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 85, 11 |
Conread position: | 18-156 |
Cow position: | chr24:28690551-28690688 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 86, 31 |
Conread position: | 23-156 |
Cow position: | chr24:28045623-28045755 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 86, 13 |
Conread position: | 29-156 |
Cow position: | chr24:35150396-35150525 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 29-156 |
Cow position: | chr24:39523573-39523446 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.