Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-119
Cow position: chr24:41423456-41423573 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-130
Cow position: chr24:27207348-27207218 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 1-136
Cow position: chr24:17832967-17832832 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-136
Cow position: chr24:18695466-18695602 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 1-138
Cow position: chr24:24137010-24136876 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 78

Conread position: 1-139
Cow position: chr24:27719908-27719772 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 18

Conread position: 1-140
Cow position: chr24:27149242-27149386 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 1-140
Cow position: chr24:27967925-27968071 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 18

Conread position: 1-140
Cow position: chr24:30226787-30226927 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1-140
Cow position: chr24:36486211-36486078 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-151
Cow position: chr24:27552742-27552892 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position: chr24:42007586-42007738 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 1-152
Cow position: chr24:32204947-32204796 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 20

Conread position: 1-153
Cow position: chr24:15861754-15861598 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 1-153
Cow position: chr24:18390442-18390292 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1-153
Cow position: chr24:18485150-18484994 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 18

Conread position: 1-154
Cow position: chr24:28721738-28721890 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-154
Cow position: chr24:29595964-29595808 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 1-154
Cow position: chr24:31159464-31159620 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 18

Conread position: 1-154
Cow position: chr24:39218996-39218839 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 82

Conread position: 1-155
Cow position: chr24:3493739-3493886 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position: chr24:18331571-18331720 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-155
Cow position: chr24:28699904-28700052 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 47

Conread position: 1-155
Cow position: chr24:32054506-32054663 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 1-155
Cow position: chr24:33465761-33465616 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-155
Cow position: chr24:33944251-33944403 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 19

Conread position: 1-155
Cow position: chr24:43432639-43432792 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 141, 0

Conread position: 1-156
Cow position: chr24:2675169-2675318 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 1-156
Cow position: chr24:7913849-7914009 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position: chr24:7917518-7917358 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 1-156
Cow position: chr24:16895589-16895434 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 77, 19

Conread position: 1-156
Cow position: chr24:17752266-17752109 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 28

Conread position: 1-156
Cow position: chr24:17955596-17955441 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 10, 101

Conread position: 1-156
Cow position: chr24:18017074-18017230 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 1-156
Cow position: chr24:18741724-18741569 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position: chr24:18970661-18970505 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 148, 0

Conread position: 1-156
Cow position: chr24:18999894-19000050 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 73

Conread position: 1-156
Cow position: chr24:19535405-19535253 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 1-156
Cow position: chr24:19800693-19800850 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 57

Conread position: 1-156
Cow position: chr24:20943014-20943171 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 18

Conread position: 1-156
Cow position: chr24:27052649-27052491 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 1-156
Cow position: chr24:27290715-27290874 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 64

Conread position: 1-156
Cow position: chr24:27906285-27906441 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 108, 37

Conread position: 1-156
Cow position: chr24:28253553-28253710 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 11

Conread position: 1-156
Cow position: chr24:32070813-32070966 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 18

Conread position: 1-156
Cow position: chr24:34008731-34008570 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position: chr24:34396327-34396176 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position: chr24:34532974-34533118 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-156
Cow position: chr24:34742602-34742756 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 18

Conread position: 1-156
Cow position: chr24:35073939-35074096 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 126

Conread position: 1-156
Cow position: chr24:35576688-35576535 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 139

Conread position: 1-156
Cow position: chr24:35794889-35794732 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position: chr24:42825647-42825495 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position: chr24:43364206-43364364 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 68

Conread position: 1-158
Cow position: chr24:25524894-25525046 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 117

Conread position: 1-169
Cow position: chr24:34315199-34315372 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 2-140
Cow position: chr24:31382742-31382888 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 2-144
Cow position: chr24:16509818-16509961 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 2-155
Cow position: chr24:29673367-29673524 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 90

Conread position: 2-155
Cow position: chr24:44041165-44041003 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 2-156
Cow position: chr24:352757-352603 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 17

Conread position: 2-156
Cow position: chr24:28553699-28553551 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 3-156
Cow position: chr24:24457397-24457247 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 100, 62

Conread position: 3-156
Cow position: chr24:30484102-30483945 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 3-165
Cow position: chr24:34782937-34782774 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 101, 144

Conread position: 7-181
Cow position: chr24:32370066-32369888 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 8-155
Cow position: chr24:16645470-16645318 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 9-156
Cow position: chr24:10125726-10125877 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 11-155
Cow position: chr24:28289393-28289251 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 12-152
Cow position: chr24:41985847-41985995 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 71

Conread position: 12-154
Cow position: chr24:40129984-40130130 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 12-155
Cow position: chr24:11840043-11840189 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 81

Conread position: 12-155
Cow position: chr24:40850021-40850163 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 12-156
Cow position: chr24:10841355-10841204 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 12-156
Cow position: chr24:27874459-27874598 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 12-156
Cow position: chr24:29679446-29679307 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 36

Conread position: 12-156
Cow position: chr24:30545002-30544859 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 12-156
Cow position: chr24:39905592-39905453 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 12-179
Cow position: chr24:26732312-26732475 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 24

Conread position: 13-156
Cow position: chr24:5838-5695 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 85

Conread position: 13-156
Cow position: chr24:17104714-17104567 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 13-156
Cow position: chr24:24662271-24662128 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 25

Conread position: 13-156
Cow position: chr24:29170828-29170966 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 14-152
Cow position: chr24:3152721-3152580 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 67

Conread position: 14-156
Cow position: chr24:38006846-38006705 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 85, 11

Conread position: 18-156
Cow position: chr24:28690551-28690688 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 31

Conread position: 23-156
Cow position: chr24:28045623-28045755 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 13

Conread position: 29-156
Cow position: chr24:35150396-35150525 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 29-156
Cow position: chr24:39523573-39523446 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.