Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
| Conread position: | 1-140 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-143 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 68 |
| Conread position: | 1-148 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-153 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-154 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 1-154 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 55 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 44 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 101, 91 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-179 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 2-137 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 2-144 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 2-159 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 113 |
| Conread position: | 3-140 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 3-151 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 3-155 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 3-155 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 3-156 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 87 |
| Conread position: | 4-154 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-154 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 4-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 4-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 4-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 4-181 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 167 |
| Conread position: | 7-156 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 39 |
| Conread position: | 7-156 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 7-156 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 9-155 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 9-156 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 10-156 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 11-156 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 11-156 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-181 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 152 |
| Conread position: | 12-148 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 13-129 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 13-151 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 13-155 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 13-156 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 14-153 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 17-155 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 21-155 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-156 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 25-156 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 38-155 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 38-156 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.