Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
| Conread position: | 1-138 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 1-138 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-140 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 1-140 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-140 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 1-142 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-150 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 1-153 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 80 |
| Conread position: | 1-153 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 1-153 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 6 |
| Conread position: | 1-154 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-154 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-154 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 98, 6 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 70 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-155 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 108 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 91 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 130, 43 |
| Conread position: | 1-156 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-160 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 150, 76 |
| Conread position: | 1-162 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 2-136 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-140 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-154 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 2-156 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-156 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-156 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 3-143 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 3-153 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-155 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 3-156 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 4-140 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 7-155 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 7-156 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 7-156 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-156 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 8-144 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 9-155 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 10-155 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 11-152 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 11-154 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 12-136 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 12-152 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 12-153 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 12-154 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 12-155 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 12-155 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 80 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 133 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 12-156 |
| Cow position: | |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 13-140 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 113 |
| Conread position: | 13-155 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 13-156 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 13-156 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 125 |
| Conread position: | 13-156 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 14-155 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 14-156 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 14-156 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 14-159 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 8 |
| Conread position: | 15-149 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 98 |
| Conread position: | 15-156 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 15-156 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 15-156 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-156 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-155 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 72 |
| Conread position: | 19-156 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 107 |
| Conread position: | 19-156 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 21-156 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 22-155 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 25-153 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 25-155 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 25-155 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 27-143 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 32-144 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-156 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.