Cow genome map

Conread name: Ss1.1-Utr1-UTR01A040081.5

Conread position: 1-130
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 18

Conread position: 1-138
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 18

Conread position: 1-138
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-140
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 78

Conread position: 1-140
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 1-140
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 1-143
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-143
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 1-148
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1-149
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 101, 18

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 18

Conread position: 1-152
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 71

Conread position: 1-153
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 18

Conread position: 1-153
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-154
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 1-154
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 18

Conread position: 1-154
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 65, 45

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 103, 18

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 114

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 18

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 18

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 19

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 19

Conread position: 1-155
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 8

Conread position: 1-155
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 90

Conread position: 1-155
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 18

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 1-155
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 18

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 1-155
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-155
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 61

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 90

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 18

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 90

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 103, 19

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 18

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 1-156
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 21

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 141, 18

Conread position: 1-156
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 18

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 91

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-156
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 78

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 99, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 11

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 19

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 106

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 18

Conread position: 1-156
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 1-156
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 18

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 25

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 131
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 79

Conread position: 1-157
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-159
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 18

Conread position: 1-162
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 1-179
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1-179
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 18

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 18

Conread position: 2-136
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 2-138
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 2-155
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 2-155
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 18

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 89

Conread position: 2-156
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 21

Conread position: 2-181
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 17

Conread position: 3-140
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 3-154
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 76

Conread position: 3-155
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 121

Conread position: 3-156
Cow position:
Alignm length: 160
Alignm identity: 127
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 3-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 3-182
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 89

Conread position: 4-136
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 96, 56

Conread position: 4-155
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 15

Conread position: 4-156
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 15

Conread position: 7-139
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 7-148
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 7-153
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 7-154
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 63

Conread position: 7-155
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 7-156
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 14

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 31

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 95, 83

Conread position: 7-156
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 7-157
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 8-130
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 9-155
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 9-156
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 89, 11

Conread position: 9-156
Cow position:
Alignm length: 148
Alignm identity: 123
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 10-153
Cow position:
Alignm length: 148
Alignm identity: 123
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 81

Conread position: 10-157
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 11-155
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 120

Conread position: 12-154
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 34

Conread position: 12-154
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 12-155
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 36

Conread position: 12-155
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 37

Conread position: 12-155
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 12-155
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 12-156
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 61

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 123

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 36

Conread position: 12-156
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 104

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 124
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 88, 97

Conread position: 12-156
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 12-156
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 12-156
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 12-156
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 88, 104

Conread position: 12-156
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 79

Conread position: 13-155
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 13-156
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 57

Conread position: 13-156
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 14-155
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 87

Conread position: 14-156
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 10

Conread position: 14-156
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 35

Conread position: 14-156
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 55

Conread position: 15-152
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 64

Conread position: 15-156
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 64

Conread position: 15-156
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 16-155
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 18-129
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 19-156
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 23-156
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 81

Conread position: 37-155
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 53

Conread position: 38-156
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.