Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
| Conread position: | 1-130 |
| Cow position: | chr5:26990289-26990423 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 1-138 |
| Cow position: | chr5:12557395-12557254 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-138 |
| Cow position: | chr5:53842181-53842316 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-140 |
| Cow position: | chr5:43395245-43395112 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 1-140 |
| Cow position: | chr5:57327693-57327830 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-140 |
| Cow position: | chr5:71579071-71579213 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-143 |
| Cow position: | chr5:7921503-7921364 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-143 |
| Cow position: | chr5:56469929-56469782 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-148 |
| Cow position: | chr5:16508992-16509145 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-149 |
| Cow position: | chr5:17063193-17063040 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-152 |
| Cow position: | chr5:34115547-34115702 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-152 |
| Cow position: | chr5:53855591-53855749 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 1-153 |
| Cow position: | chr5:4218771-4218918 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 146, 18 |
| Conread position: | 1-153 |
| Cow position: | chr5:7140214-7140056 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-153 |
| Cow position: | chr5:33414515-33414358 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-154 |
| Cow position: | chr5:30487133-30487293 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-154 |
| Cow position: | chr5:44994141-44993989 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 1-154 |
| Cow position: | chr5:62142567-62142727 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 1-155 |
| Cow position: | chr5:3242579-3242425 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:8024298-8024141 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:12901812-12901969 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 1-155 |
| Cow position: | chr5:18898876-18899028 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:24485539-24485382 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:28224349-28224505 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:30950019-30949863 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:35969439-35969584 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 1-155 |
| Cow position: | chr5:36855101-36855256 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:41164983-41165140 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 1-155 |
| Cow position: | chr5:43474744-43474898 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 1-155 |
| Cow position: | chr5:45273604-45273449 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 90 |
| Conread position: | 1-155 |
| Cow position: | chr5:47696545-47696389 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:50722945-50723098 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:55176787-55176949 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 1-155 |
| Cow position: | chr5:56635797-56635947 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:63427111-63426953 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:71494714-71494873 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 1-156 |
| Cow position: | chr5:1027795-1027641 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 1-156 |
| Cow position: | chr5:4032097-4031936 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:9090123-9089970 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:11540151-11539997 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:11668289-11668132 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 1-156 |
| Cow position: | chr5:14550685-14550531 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:16206258-16206103 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 1-156 |
| Cow position: | chr5:16893875-16893718 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:19523794-19523953 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:20127952-20128105 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:21964182-21964342 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:23866266-23866118 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:24349004-24349160 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:27403342-27403176 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:29212841-29212997 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 1-156 |
| Cow position: | chr5:29827946-29828100 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:29980086-29979929 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:32975656-32975500 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:33560837-33560681 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 91 |
| Conread position: | 1-156 |
| Cow position: | chr5:34528459-34528604 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:39258418-39258561 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:44796835-44796680 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 1-156 |
| Cow position: | chr5:52000119-52000276 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:52165282-52165124 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:55955806-55955961 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 1-156 |
| Cow position: | chr5:56820365-56820208 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 1-156 |
| Cow position: | chr5:57768086-57767932 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 1-156 |
| Cow position: | chr5:58856000-58856156 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:59115278-59115439 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:60747381-60747223 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 1-156 |
| Cow position: | chr5:66972324-66972482 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:73168105-73167958 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 1-157 |
| Cow position: | chr5:21040079-21039924 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 1-157 |
| Cow position: | chr5:47317074-47316920 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-159 |
| Cow position: | chr5:51053751-51053599 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-162 |
| Cow position: | chr5:60448112-60448277 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:33552513-33552348 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-179 |
| Cow position: | chr5:40039873-40039695 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 1-194 |
| Cow position: | chr5:52645182-52644990 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 2-136 |
| Cow position: | chr5:18289027-18289164 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 2-138 |
| Cow position: | chr5:45036919-45037049 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-155 |
| Cow position: | chr5:31918549-31918695 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-155 |
| Cow position: | chr5:55966981-55966828 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 2-156 |
| Cow position: | chr5:23357232-23357386 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 2-156 |
| Cow position: | chr5:46122452-46122300 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 2-181 |
| Cow position: | chr5:44848128-44847944 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 3-140 |
| Cow position: | chr5:17644757-17644617 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-154 |
| Cow position: | chr5:54060175-54060327 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 3-155 |
| Cow position: | chr5:41293979-41294132 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 121 |
| Conread position: | 3-156 |
| Cow position: | chr5:23678805-23678646 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-156 |
| Cow position: | chr5:54311231-54311389 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-182 |
| Cow position: | chr5:66581862-66582040 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 4-136 |
| Cow position: | chr5:30638959-30638830 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 96, 56 |
| Conread position: | 4-155 |
| Cow position: | chr5:73080102-73080256 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 4-156 |
| Cow position: | chr5:32696921-32696769 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 7-139 |
| Cow position: | chr5:2288646-2288513 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-148 |
| Cow position: | chr5:21944297-21944443 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-153 |
| Cow position: | chr5:12866917-12866768 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-154 |
| Cow position: | chr5:55019196-55019343 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 7-155 |
| Cow position: | chr5:56680150-56680303 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 7-156 |
| Cow position: | chr5:18574078-18574228 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 7-156 |
| Cow position: | chr5:35235806-35235656 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 31 |
| Conread position: | 7-156 |
| Cow position: | chr5:50575687-50575837 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 83 |
| Conread position: | 7-156 |
| Cow position: | chr5:51801070-51800919 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 7-157 |
| Cow position: | chr5:43992224-43992378 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 8-130 |
| Cow position: | chr5:23866773-23866653 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 9-155 |
| Cow position: | chr5:14473509-14473352 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 9-156 |
| Cow position: | chr5:17999587-17999439 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 9-156 |
| Cow position: | chr5:51935096-51935243 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-153 |
| Cow position: | chr5:58144697-58144551 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 10-157 |
| Cow position: | chr5:1087291-1087145 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 11-155 |
| Cow position: | chr5:54768003-54767857 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 120 |
| Conread position: | 12-154 |
| Cow position: | chr5:5855775-5855909 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 12-154 |
| Cow position: | chr5:61840099-61840239 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 12-155 |
| Cow position: | chr5:4617276-4617421 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 12-155 |
| Cow position: | chr5:34192809-34192960 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 12-155 |
| Cow position: | chr5:49685363-49685219 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 12-155 |
| Cow position: | chr5:72564669-72564816 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 12-156 |
| Cow position: | chr5:458399-458542 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-156 |
| Cow position: | chr5:1678302-1678445 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 12-156 |
| Cow position: | chr5:2309649-2309503 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 12-156 |
| Cow position: | chr5:13717660-13717516 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 123 |
| Conread position: | 12-156 |
| Cow position: | chr5:15479033-15479179 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 12-156 |
| Cow position: | chr5:35125960-35126108 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 104 |
| Conread position: | 12-156 |
| Cow position: | chr5:47323372-47323515 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 88, 97 |
| Conread position: | 12-156 |
| Cow position: | chr5:47704220-47704073 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 12-156 |
| Cow position: | chr5:54350456-54350308 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-156 |
| Cow position: | chr5:54713824-54713678 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 12-156 |
| Cow position: | chr5:64137161-64137309 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 88, 104 |
| Conread position: | 12-156 |
| Cow position: | chr5:65887099-65886957 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 13-155 |
| Cow position: | chr5:3639578-3639435 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 13-156 |
| Cow position: | chr5:42744696-42744839 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 13-156 |
| Cow position: | chr5:53946803-53946950 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 14-155 |
| Cow position: | chr5:72287004-72286863 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 14-156 |
| Cow position: | chr5:26262763-26262621 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 10 |
| Conread position: | 14-156 |
| Cow position: | chr5:32140799-32140655 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 14-156 |
| Cow position: | chr5:37808760-37808610 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 15-152 |
| Cow position: | chr5:26377759-26377620 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 15-156 |
| Cow position: | chr5:30805077-30805218 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 64 |
| Conread position: | 15-156 |
| Cow position: | chr5:42064113-42064258 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 16-155 |
| Cow position: | chr5:57527007-57526872 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 18-129 |
| Cow position: | chr5:28927676-28927560 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 19-156 |
| Cow position: | chr5:34300830-34300972 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 23-156 |
| Cow position: | chr5:45420220-45420084 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 37-155 |
| Cow position: | chr5:4280380-4280500 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 38-156 |
| Cow position: | chr5:67212289-67212414 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.