Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A040081.5 |
| Conread position: | 1-134 |
| Cow position: | chr6:357979-357841 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-137 |
| Cow position: | chr6:21559597-21559463 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-137 |
| Cow position: | chr6:48344243-48344381 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-138 |
| Cow position: | chr6:9732934-9732790 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-139 |
| Cow position: | chr6:19351243-19351106 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 1-139 |
| Cow position: | chr6:45160383-45160248 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-140 |
| Cow position: | chr6:62324902-62325043 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-140 |
| Cow position: | chr6:62479254-62479109 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-144 |
| Cow position: | chr6:47540442-47540586 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 1-147 |
| Cow position: | chr6:12629933-12630079 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 1-147 |
| Cow position: | chr6:53731432-53731582 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-150 |
| Cow position: | chr6:40834558-40834407 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 1-150 |
| Cow position: | chr6:62925086-62924937 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-151 |
| Cow position: | chr6:29239850-29240003 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-152 |
| Cow position: | chr6:8804619-8804466 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-153 |
| Cow position: | chr6:44078429-44078582 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-153 |
| Cow position: | chr6:55763764-55763919 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:4559394-4559239 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:9008700-9008547 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 1-154 |
| Cow position: | chr6:12543022-12542865 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-154 |
| Cow position: | chr6:50467046-50467200 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 1-154 |
| Cow position: | chr6:53932936-53932784 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-154 |
| Cow position: | chr6:60819426-60819578 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:4692069-4691909 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:19996529-19996680 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 1-155 |
| Cow position: | chr6:34196239-34196084 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-155 |
| Cow position: | chr6:35181347-35181191 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 1-155 |
| Cow position: | chr6:37149098-37149255 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:38771197-38771351 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 1-155 |
| Cow position: | chr6:44984240-44984396 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:50984136-50984288 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:53519713-53519558 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:60739926-60740080 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-155 |
| Cow position: | chr6:66531910-66531755 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 1-156 |
| Cow position: | chr6:582360-582205 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 1-156 |
| Cow position: | chr6:6343337-6343493 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 1-156 |
| Cow position: | chr6:8562631-8562789 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 99, 5 |
| Conread position: | 1-156 |
| Cow position: | chr6:8788127-8787970 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 1-156 |
| Cow position: | chr6:10399990-10399839 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 1-156 |
| Cow position: | chr6:11246674-11246831 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-156 |
| Cow position: | chr6:12337895-12338060 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:14949568-14949414 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 1-156 |
| Cow position: | chr6:15242747-15242903 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 1-156 |
| Cow position: | chr6:15300908-15300762 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:17334145-17333986 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 1-156 |
| Cow position: | chr6:17794845-17794697 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:19292709-19292868 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 1-156 |
| Cow position: | chr6:20206185-20206342 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:27888260-27888418 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 1-156 |
| Cow position: | chr6:30973963-30974113 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 1-156 |
| Cow position: | chr6:35726006-35726161 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 108 |
| Conread position: | 1-156 |
| Cow position: | chr6:35993492-35993651 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 1-156 |
| Cow position: | chr6:38233869-38234026 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 1-156 |
| Cow position: | chr6:38609879-38610035 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 18 |
| Conread position: | 1-156 |
| Cow position: | chr6:38614730-38614886 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 1-156 |
| Cow position: | chr6:38641405-38641564 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 1-156 |
| Cow position: | chr6:42565599-42565755 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:44098997-44099154 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:45065103-45064950 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 1-156 |
| Cow position: | chr6:54368989-54368837 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 1-156 |
| Cow position: | chr6:54430734-54430897 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:54867424-54867584 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:57164337-57164496 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:58370664-58370825 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:60057745-60057588 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 1-156 |
| Cow position: | chr6:60239478-60239328 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 1-156 |
| Cow position: | chr6:62669782-62669932 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-156 |
| Cow position: | chr6:68049346-68049498 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 1-173 |
| Cow position: | chr6:57298927-57299100 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 1-179 |
| Cow position: | chr6:60118059-60118239 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 168 |
| Conread position: | 1-179 |
| Cow position: | chr6:61631698-61631520 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 163 |
| Conread position: | 2-142 |
| Cow position: | chr6:20230919-20230773 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-151 |
| Cow position: | chr6:60667330-60667475 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 2-152 |
| Cow position: | chr6:54287984-54288139 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 2-153 |
| Cow position: | chr6:53841587-53841442 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-154 |
| Cow position: | chr6:66131215-66131372 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-154 |
| Cow position: | chr6:66874262-66874416 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 2-156 |
| Cow position: | chr6:6067780-6067635 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-156 |
| Cow position: | chr6:6673014-6673169 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2-156 |
| Cow position: | chr6:15937939-15937788 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 2-156 |
| Cow position: | chr6:17313646-17313802 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 2-156 |
| Cow position: | chr6:38207579-38207423 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 2-156 |
| Cow position: | chr6:48169857-48170005 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-178 |
| Cow position: | chr6:51674823-51674997 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 3-153 |
| Cow position: | chr6:54365418-54365264 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-156 |
| Cow position: | chr6:3595701-3595858 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-156 |
| Cow position: | chr6:19012978-19013138 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-156 |
| Cow position: | chr6:44867628-44867476 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 3-156 |
| Cow position: | chr6:57405210-57405058 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 3-156 |
| Cow position: | chr6:67214657-67214816 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 4-155 |
| Cow position: | chr6:28482933-28483081 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 4-155 |
| Cow position: | chr6:47799205-47799359 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-156 |
| Cow position: | chr6:25008624-25008785 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 4-156 |
| Cow position: | chr6:40713587-40713436 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-179 |
| Cow position: | chr6:377043-377214 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 150, 59 |
| Conread position: | 5-155 |
| Cow position: | chr6:7190204-7190053 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 6-155 |
| Cow position: | chr6:52248216-52248066 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 7-150 |
| Cow position: | chr6:16411107-16411252 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 7-154 |
| Cow position: | chr6:16288136-16287993 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 7-154 |
| Cow position: | chr6:17997398-17997254 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-154 |
| Cow position: | chr6:19695725-19695874 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 7-156 |
| Cow position: | chr6:28283783-28283928 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 7-156 |
| Cow position: | chr6:46173336-46173192 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-156 |
| Cow position: | chr6:51835314-51835466 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 7-156 |
| Cow position: | chr6:63299115-63298964 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 7-157 |
| Cow position: | chr6:65264622-65264474 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 8-155 |
| Cow position: | chr6:49002816-49002666 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 8-156 |
| Cow position: | chr6:17549064-17548907 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 8-159 |
| Cow position: | chr6:54365085-54364928 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 9-155 |
| Cow position: | chr6:2623700-2623842 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 112 |
| Conread position: | 9-155 |
| Cow position: | chr6:21514695-21514542 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 9-155 |
| Cow position: | chr6:37395489-37395335 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 9-156 |
| Cow position: | chr6:5095629-5095475 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 9-156 |
| Cow position: | chr6:46557972-46558124 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 72 |
| Conread position: | 10-156 |
| Cow position: | chr6:5413741-5413889 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 10-156 |
| Cow position: | chr6:35842573-35842725 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 121 |
| Conread position: | 11-148 |
| Cow position: | chr6:61137294-61137434 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 11-155 |
| Cow position: | chr6:16700185-16700327 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 11-156 |
| Cow position: | chr6:8599925-8600067 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 11-156 |
| Cow position: | chr6:38441096-38441239 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 130 |
| Conread position: | 12-142 |
| Cow position: | chr6:4864627-4864494 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-153 |
| Cow position: | chr6:61515270-61515124 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-154 |
| Cow position: | chr6:16103273-16103131 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 12-155 |
| Cow position: | chr6:10176375-10176236 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-155 |
| Cow position: | chr6:12845306-12845446 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 12-155 |
| Cow position: | chr6:22502988-22502845 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-155 |
| Cow position: | chr6:58608518-58608379 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 94 |
| Conread position: | 12-155 |
| Cow position: | chr6:59108866-59109011 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 12-156 |
| Cow position: | chr6:4468689-4468835 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 103 |
| Conread position: | 12-156 |
| Cow position: | chr6:18049103-18048957 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 12-156 |
| Cow position: | chr6:24781635-24781488 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 12-156 |
| Cow position: | chr6:28148758-28148902 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 12-156 |
| Cow position: | chr6:33509711-33509856 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 12-156 |
| Cow position: | chr6:49685505-49685649 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 12-156 |
| Cow position: | chr6:49694302-49694446 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 79 |
| Conread position: | 12-156 |
| Cow position: | chr6:67281818-67281961 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 89, 81 |
| Conread position: | 12-156 |
| Cow position: | chr6:67456640-67456785 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 12-157 |
| Cow position: | chr6:34075948-34076097 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 12-158 |
| Cow position: | chr6:5673158-5673317 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 12-182 |
| Cow position: | chr6:36470645-36470470 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 160 |
| Conread position: | 13-136 |
| Cow position: | chr6:53711037-53711162 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 13-156 |
| Cow position: | chr6:12092071-12091926 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 13-156 |
| Cow position: | chr6:15447281-15447131 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 13-156 |
| Cow position: | chr6:16191596-16191745 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 13-156 |
| Cow position: | chr6:35990311-35990169 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 13-156 |
| Cow position: | chr6:36928577-36928728 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 13-156 |
| Cow position: | chr6:47989107-47989239 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 13-156 |
| Cow position: | chr6:67950875-67951022 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 14-155 |
| Cow position: | chr6:143446-143309 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 14-156 |
| Cow position: | chr6:23402067-23401925 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-156 |
| Cow position: | chr6:28318327-28318467 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 85 |
| Conread position: | 14-156 |
| Cow position: | chr6:62371251-62371110 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 15-156 |
| Cow position: | chr6:32268952-32268817 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 16-156 |
| Cow position: | chr6:40761050-40761192 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 17-156 |
| Cow position: | chr6:30688686-30688548 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 21-154 |
| Cow position: | chr6:36284172-36284308 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 21-156 |
| Cow position: | chr6:23353483-23353617 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 22-155 |
| Cow position: | chr6:46865658-46865526 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 68 |
| Conread position: | 22-156 |
| Cow position: | chr6:61142633-61142495 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 25-155 |
| Cow position: | chr6:11169632-11169766 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 41-156 |
| Cow position: | chr6:68652403-68652284 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.