Cow genome map

Conread name: Ss1.1-Utr1-UTR01A080100.5

Conread position: 222-401
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 117

Conread position: 223-440
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 196

Conread position: 223-440
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 39

Conread position: 223-441
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 223-447
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 223-452
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 116

Conread position: 225-440
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 209

Conread position: 227-440
Cow position:
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 49

Conread position: 227-440
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 118

Conread position: 227-440
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 200

Conread position: 227-445
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 77, 35

Conread position: 243-452
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 25

Conread position: 243-454
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 58

Conread position: 244-440
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 55

Conread position: 247-447
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 12

Conread position: 249-433
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 81, 13

Conread position: 249-439
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 58, 10

Conread position: 249-440
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 249-441
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 13

Conread position: 249-442
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 5, 66

Conread position: 249-445
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 249-452
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 10

Conread position: 251-440
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 252-398
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 7

Conread position: 252-399
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 10

Conread position: 252-422
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 10

Conread position: 252-428
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 252-433
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 10

Conread position: 252-438
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 252-440
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 10

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 10

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 123, 10

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 154, 10

Conread position: 252-440
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 140, 10

Conread position: 252-440
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 10

Conread position: 252-442
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 252-443
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 10

Conread position: 252-444
Cow position:
Alignm length: 194
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 188, 7

Conread position: 252-445
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 252-448
Cow position:
Alignm length: 197
Alignm identity: 156
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 252-453
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 188, 10

Conread position: 253-440
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 9

Conread position: 253-440
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 159, 9

Conread position: 254-440
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 257-425
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 127, 5

Conread position: 257-440
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 259-436
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 116, 13

Conread position: 261-440
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 261-440
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 262-416
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 41

Conread position: 262-416
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 262-422
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 154, 0

Conread position: 262-428
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 141, 164

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-438
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 38

Conread position: 262-439
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 262-439
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-439
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 148

Conread position: 262-439
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 157, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 39

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 29

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 38

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 164

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 154, 0

Conread position: 262-440
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 129, 61

Conread position: 262-440
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 134, 60

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-443
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 262-445
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 133, 148

Conread position: 262-446
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 177, 127

Conread position: 262-447
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 34

Conread position: 262-447
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 0

Conread position: 262-447
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 145, 0

Conread position: 262-452
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 14, 39

Conread position: 262-452
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 177, 0

Conread position: 262-463
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 182, 0

Conread position: 263-446
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 264-440
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 264-440
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 146

Conread position: 264-440
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 265-440
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 265-442
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 266-439
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 266-440
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 34

Conread position: 269-440
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 270-446
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 272-430
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 272-440
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 272-440
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 276-440
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 278-440
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 278-440
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 147, 0

Conread position: 290-440
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 302-440
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 26

Conread position: 303-440
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 305-440
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 308-442
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 309-437
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 21

Conread position: 333-440
Cow position:
Alignm length: 108
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 334-448
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 23

Show alignments to all cow chromosomes.