Cow genome map

Conread name: Ss1.1-Utr1-UTR01A080100.5

Conread position: 57-438
Cow position:
Alignm length: 390
Alignm identity: 246
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 24

Conread position: 223-428
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 223-440
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 39, 55

Conread position: 225-428
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 227-440
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 227-440
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 32

Conread position: 227-447
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 15

Conread position: 230-440
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 236-440
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 23

Conread position: 238-440
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 243-453
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 244-436
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 244-440
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 249-398
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 249-438
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 8

Conread position: 249-439
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 94, 13

Conread position: 249-439
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 249-440
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 249-440
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 249-445
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 19

Conread position: 249-446
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 252-386
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 252-410
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 252-430
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 7

Conread position: 252-436
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 10

Conread position: 252-436
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 252-437
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 93, 10

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 13

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 252-440
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 12

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 252-442
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 164, 10

Conread position: 252-445
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 10

Conread position: 252-445
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 252-452
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 188, 10

Conread position: 254-425
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 8

Conread position: 254-442
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 8

Conread position: 257-440
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 5

Conread position: 259-440
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 23

Conread position: 259-440
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 260-410
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 262-423
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 262-433
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 262-434
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 262-436
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 38

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 150, 0

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 150, 0

Conread position: 262-439
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 39

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 134, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 156, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 163, 0

Conread position: 262-440
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 0

Conread position: 262-445
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 262-445
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 262-445
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 0

Conread position: 262-445
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 38

Conread position: 262-445
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 38

Conread position: 262-447
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-448
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 71, 0

Conread position: 262-452
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 178, 0

Conread position: 262-453
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 29

Conread position: 263-443
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 37

Conread position: 264-433
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 45, 154

Conread position: 264-454
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 172, 82

Conread position: 267-434
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 267-443
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 27

Conread position: 268-440
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 271-447
Cow position:
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 272-416
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 272-443
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 28

Conread position: 276-440
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 284-440
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 287-440
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 288-440
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 297-440
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 305-440
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 305-440
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 305-447
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 306-440
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 306-440
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 307-440
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 311-447
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 11

Conread position: 315-440
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 316-447
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 325-440
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 328-440
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 334-445
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.