Cow genome map

Conread name: Ss1.1-Utr1-UTR01A080100.5

Conread position: 204-440
Cow position: chr19:2261735-2261492 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 11

Conread position: 215-441
Cow position: chr19:38559581-38559345 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 222-440
Cow position: chr19:42581575-42581347 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 119

Conread position: 227-440
Cow position: chr19:40016861-40016644 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 240-441
Cow position: chr19:3114046-3114246 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 90

Conread position: 243-433
Cow position: chr19:35981512-35981707 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 142

Conread position: 244-440
Cow position: chr19:39340446-39340250 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 44

Conread position: 247-436
Cow position: chr19:26805234-26805042 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 15

Conread position: 249-430
Cow position: chr19:44460695-44460515 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 249-438
Cow position: chr19:35382399-35382216 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 122

Conread position: 249-438
Cow position: chr19:54361365-54361177 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 10

Conread position: 249-439
Cow position: chr19:17882698-17882888 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 115, 13

Conread position: 249-440
Cow position: chr19:673030-672839 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 13

Conread position: 249-440
Cow position: chr19:6439946-6440136 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 249-440
Cow position: chr19:30474394-30474206 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 249-440
Cow position: chr19:35612079-35611889 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 249-447
Cow position: chr19:3176224-3176417 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 191, 13

Conread position: 251-440
Cow position: chr19:15445109-15444921 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 251-440
Cow position: chr19:40834509-40834320 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 140

Conread position: 252-413
Cow position: chr19:20126771-20126932 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 159, 10

Conread position: 252-421
Cow position: chr19:8207250-8207080 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 164, 0

Conread position: 252-436
Cow position: chr19:14157496-14157317 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 252-439
Cow position: chr19:5732259-5732444 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 7

Conread position: 252-439
Cow position: chr19:9705427-9705244 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position: chr19:159098-158910 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 168, 7

Conread position: 252-440
Cow position: chr19:2587948-2588136 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 252-440
Cow position: chr19:30758237-30758420 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position: chr19:39749974-39750166 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 252-440
Cow position: chr19:47189695-47189508 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 252-442
Cow position: chr19:36418752-36418934 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 254-440
Cow position: chr19:1151431-1151616 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 262-407
Cow position: chr19:44395847-44395702 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-410
Cow position: chr19:22390692-22390543 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 262-433
Cow position: chr19:42297350-42297178 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 37

Conread position: 262-434
Cow position: chr19:6554742-6554917 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 167

Conread position: 262-438
Cow position: chr19:22512009-22512184 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 262-438
Cow position: chr19:28576286-28576110 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-439
Cow position: chr19:51287639-51287461 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 262-440
Cow position: chr19:41099-41277 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 84

Conread position: 262-440
Cow position: chr19:100934-100756 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:165363-165186 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 262-440
Cow position: chr19:175229-175410 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 154

Conread position: 262-440
Cow position: chr19:336137-335961 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 262-440
Cow position: chr19:436572-436394 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:474732-474554 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:542850-542677 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 262-440
Cow position: chr19:1293114-1293292 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:2270533-2270356 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:3088561-3088378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 65

Conread position: 262-440
Cow position: chr19:4388346-4388525 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 39

Conread position: 262-440
Cow position: chr19:7344799-7344976 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 262-440
Cow position: chr19:7481171-7480993 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:7490864-7491042 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:12651500-12651678 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:12775889-12776067 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:16317845-16317667 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:16479101-16478923 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:19388598-19388776 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:20107507-20107680 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 262-440
Cow position: chr19:20611098-20611276 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 85

Conread position: 262-440
Cow position: chr19:21338067-21337890 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 150, 0

Conread position: 262-440
Cow position: chr19:30517567-30517745 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:33876181-33876359 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:33944331-33944509 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position: chr19:39182774-39182596 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 38

Conread position: 262-440
Cow position: chr19:40849721-40849545 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 129, 113

Conread position: 262-440
Cow position: chr19:40884981-40884801 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 262-440
Cow position: chr19:43148346-43148524 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:52148784-52148606 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:55164890-55164712 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position: chr19:55842760-55842942 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 16

Conread position: 262-441
Cow position: chr19:1585233-1585409 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 262-445
Cow position: chr19:12553469-12553285 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 38

Conread position: 262-445
Cow position: chr19:28795552-28795369 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-447
Cow position: chr19:890432-890246 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 38

Conread position: 262-447
Cow position: chr19:33640838-33641021 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 20

Conread position: 262-452
Cow position: chr19:39696028-39696219 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 177, 0

Conread position: 263-440
Cow position: chr19:28403803-28403626 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 263-440
Cow position: chr19:28596143-28596319 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 264-410
Cow position: chr19:1354800-1354654 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 127, 139

Conread position: 264-440
Cow position: chr19:207269-207442 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 268-440
Cow position: chr19:1578878-1579048 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 79

Conread position: 269-439
Cow position: chr19:4597049-4597217 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 271-440
Cow position: chr19:799015-799186 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 40

Conread position: 272-438
Cow position: chr19:28801786-28801620 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 273-440
Cow position: chr19:10194417-10194584 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 273-440
Cow position: chr19:30560924-30561089 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 133, 98

Conread position: 274-440
Cow position: chr19:38811171-38811335 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 274-446
Cow position: chr19:731210-731041 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 142, 54

Conread position: 279-440
Cow position: chr19:47669669-47669830 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 281-447
Cow position: chr19:374929-374762 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 286-440
Cow position: chr19:35621309-35621463 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 49

Conread position: 305-440
Cow position: chr19:40800249-40800384 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 307-440
Cow position: chr19:776325-776458 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 317-440
Cow position: chr19:24733957-24734080 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.