Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A080100.5 |
| Conread position: | 204-440 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 215-441 |
| Cow position: | |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 222-440 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 40, 119 |
| Conread position: | 227-440 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 240-441 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 243-433 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 244-440 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 247-436 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 249-430 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 249-438 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 249-438 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 249-439 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 249-440 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 249-440 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 249-440 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 249-440 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 249-447 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 191, 13 |
| Conread position: | 251-440 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 251-440 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 165, 140 |
| Conread position: | 252-413 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 159, 10 |
| Conread position: | 252-421 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 252-436 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 252-439 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 252-439 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 168, 7 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-442 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 254-440 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 262-407 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-410 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 262-433 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 262-434 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 167 |
| Conread position: | 262-438 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 262-438 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-439 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 84 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 113, 65 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 129, 113 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 262-441 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 262-445 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 262-445 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-447 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-447 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 262-452 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 263-440 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-440 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 264-410 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 127, 139 |
| Conread position: | 264-440 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 268-440 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 123, 79 |
| Conread position: | 269-439 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 271-440 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 272-438 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-440 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-440 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 133, 98 |
| Conread position: | 274-440 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 274-446 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 279-440 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-447 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 286-440 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 305-440 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-440 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-440 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.