Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A080100.5 |
| Conread position: | 223-423 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 223-436 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 225-443 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 227-440 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 247-440 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 249-410 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 252-394 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 252-396 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-410 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 139, 10 |
| Conread position: | 252-426 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 252-433 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 252-434 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-438 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 10 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 167, 10 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 10 |
| Conread position: | 252-440 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-441 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 253-439 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 144 |
| Conread position: | 262-398 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-404 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 262-410 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 262-415 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-425 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-428 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-437 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 38 |
| Conread position: | 262-438 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-439 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 28, 159 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-443 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 262-445 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-445 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 262-447 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 262-449 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 267-440 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 267-445 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-440 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-447 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-447 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 274-427 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-429 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-445 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 310-440 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-438 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 14 |
Show alignments to all cow chromosomes.