Cow genome map

Conread name: Ss1.1-Utr1-UTR01A080100.5

Conread position: 222-440
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 222-440
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 117

Conread position: 223-439
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 9

Conread position: 223-440
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 223-440
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 177

Conread position: 223-440
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 223-445
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 114

Conread position: 223-447
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 223-447
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 109

Conread position: 224-441
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 227-440
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 227-440
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 49

Conread position: 227-440
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 227-445
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 187

Conread position: 244-440
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 244-447
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 17

Conread position: 249-440
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 249-440
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 10

Conread position: 249-440
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 13

Conread position: 249-440
Cow position:
Alignm length: 192
Alignm identity: 153
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 249-440
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 249-440
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 149, 13

Conread position: 249-440
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 13

Conread position: 252-401
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 143, 10

Conread position: 252-423
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 160, 7

Conread position: 252-426
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 252-430
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 252-434
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 252-436
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 252-440
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 35

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 252-440
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 7

Conread position: 252-440
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 252-440
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 79

Conread position: 252-440
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 7

Conread position: 252-442
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 252-445
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 252-445
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 252-447
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 187, 10

Conread position: 252-447
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 15

Conread position: 253-436
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 129

Conread position: 253-440
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 254-417
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 13

Conread position: 254-430
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 152, 8

Conread position: 261-423
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 261-445
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 155, 0

Conread position: 262-416
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 262-417
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 262-423
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 262-428
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 262-438
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 262-439
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 60

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 148, 45

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 129, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 35

Conread position: 262-440
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 29, 45

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 130

Conread position: 262-440
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 38

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 262-440
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 262-441
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 262-442
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 38

Conread position: 262-443
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 262-447
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 38

Conread position: 262-448
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 8

Conread position: 262-448
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 178, 0

Conread position: 263-439
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 263-440
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 263-440
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 263-440
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 263-444
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 263-445
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 264-433
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 264-438
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 264-440
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 264-440
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 264-440
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 36

Conread position: 265-434
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 266-438
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 268-440
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 32

Conread position: 268-441
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 32

Conread position: 273-440
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 276-440
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 52

Conread position: 281-440
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 284-438
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 285-440
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 14

Conread position: 305-440
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 305-445
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 113, 0

Conread position: 306-440
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 306-444
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 308-445
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 315-440
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 323-440
Cow position:
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 342-440
Cow position:
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.