Cow genome map
| Conread name: | Ss1.1-Utr1-UTR01A080100.5 |
| Conread position: | 215-442 |
| Cow position: | chr29:3711648-3711875 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 222-440 |
| Cow position: | chr29:16557042-16557252 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 223-440 |
| Cow position: | chr29:132143-132371 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 223-441 |
| Cow position: | chr29:11474822-11475051 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 223-454 |
| Cow position: | chr29:7749042-7748803 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 39, 177 |
| Conread position: | 226-440 |
| Cow position: | chr29:32893366-32893582 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 230-442 |
| Cow position: | chr29:17407769-17407984 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 243-438 |
| Cow position: | chr29:45328693-45328498 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 243-439 |
| Cow position: | chr29:5960493-5960688 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 243-440 |
| Cow position: | chr29:19656548-19656753 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 243-440 |
| Cow position: | chr29:21267299-21267502 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 244-439 |
| Cow position: | chr29:253564-253765 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 6, 22 |
| Conread position: | 244-440 |
| Cow position: | chr29:7723333-7723531 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 244-440 |
| Cow position: | chr29:7812536-7812343 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 248-442 |
| Cow position: | chr29:13850217-13850029 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 167, 11 |
| Conread position: | 249-423 |
| Cow position: | chr29:4864002-4864177 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 249-440 |
| Cow position: | chr29:2429771-2429961 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 249-440 |
| Cow position: | chr29:17137777-17137966 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 249-440 |
| Cow position: | chr29:27260454-27260262 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 249-445 |
| Cow position: | chr29:17152923-17153118 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 190, 13 |
| Conread position: | 249-447 |
| Cow position: | chr29:19515681-19515483 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 249-452 |
| Cow position: | chr29:2838673-2838470 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 252-422 |
| Cow position: | chr29:43326166-43326334 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 252-434 |
| Cow position: | chr29:16689495-16689675 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 252-436 |
| Cow position: | chr29:18523763-18523580 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 144, 10 |
| Conread position: | 252-438 |
| Cow position: | chr29:13057418-13057600 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 252-440 |
| Cow position: | chr29:607967-607784 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 252-440 |
| Cow position: | chr29:2745830-2745644 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 252-440 |
| Cow position: | chr29:5980061-5979875 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-440 |
| Cow position: | chr29:10249011-10248829 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-440 |
| Cow position: | chr29:21430191-21430004 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 252-440 |
| Cow position: | chr29:32642874-32643062 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 252-440 |
| Cow position: | chr29:43255740-43255554 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 252-441 |
| Cow position: | chr29:34331882-34331693 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 252-445 |
| Cow position: | chr29:23755162-23754974 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 252-446 |
| Cow position: | chr29:9330583-9330776 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 183, 5 |
| Conread position: | 252-447 |
| Cow position: | chr29:2299649-2299455 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 187, 10 |
| Conread position: | 256-440 |
| Cow position: | chr29:2464202-2464017 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 259-433 |
| Cow position: | chr29:13044965-13044794 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 259-452 |
| Cow position: | chr29:10644739-10644545 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 261-382 |
| Cow position: | chr29:32805188-32805308 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 262-418 |
| Cow position: | chr29:13923182-13923339 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 262-434 |
| Cow position: | chr29:16036739-16036567 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-436 |
| Cow position: | chr29:16171437-16171261 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 262-438 |
| Cow position: | chr29:5785488-5785664 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 156, 164 |
| Conread position: | 262-438 |
| Cow position: | chr29:31094911-31094735 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-439 |
| Cow position: | chr29:799995-799819 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 99, 121 |
| Conread position: | 262-439 |
| Cow position: | chr29:13584891-13585068 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:45785-45607 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:107731-107907 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:666732-666554 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:1478127-1478305 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:2102522-2102700 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:4200067-4200246 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:5240067-5240247 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:5426752-5426574 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:6263328-6263154 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 262-440 |
| Cow position: | chr29:6934166-6934344 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:7428440-7428262 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:7847066-7847242 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:8624521-8624343 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:10453140-10452962 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:10845632-10845809 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 262-440 |
| Cow position: | chr29:13899341-13899519 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:15624023-15623849 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:15966878-15966700 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:16013514-16013336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:16346881-16347059 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:19525614-19525436 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:19620593-19620415 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:20253845-20254020 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:21226652-21226830 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:22745576-22745753 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:23979386-23979564 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:25929844-25929666 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:26162161-26161982 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:27813080-27813262 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:27977151-27976973 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:28657695-28657517 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:28697703-28697525 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:31123690-31123512 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:31184051-31184229 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:32515000-32515178 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:32557070-32556891 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:34795184-34795007 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:35274348-35274170 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:35299595-35299773 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:35956629-35956450 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:39077041-39076865 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:40294007-40294185 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:40471340-40471518 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:40500313-40500138 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:40619174-40618996 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:41184341-41184163 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:42256303-42256125 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-440 |
| Cow position: | chr29:45207186-45207365 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-440 |
| Cow position: | chr29:45461908-45462086 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-441 |
| Cow position: | chr29:32961990-32962170 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 262-445 |
| Cow position: | chr29:15943028-15943211 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 148, 94 |
| Conread position: | 262-445 |
| Cow position: | chr29:32542811-32542994 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-446 |
| Cow position: | chr29:43406214-43406030 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 262-447 |
| Cow position: | chr29:2693121-2693306 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-447 |
| Cow position: | chr29:13019360-13019546 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 262-447 |
| Cow position: | chr29:32289068-32289252 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 180, 35 |
| Conread position: | 262-448 |
| Cow position: | chr29:9080117-9079936 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 177, 142 |
| Conread position: | 262-452 |
| Cow position: | chr29:408587-408396 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 262-798 |
| Cow position: | chr29:529724-529188 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 263-438 |
| Cow position: | chr29:13651810-13651985 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 263-440 |
| Cow position: | chr29:15995705-15995529 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 263-440 |
| Cow position: | chr29:31764716-31764893 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-440 |
| Cow position: | chr29:9639872-9639694 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 264-441 |
| Cow position: | chr29:6219127-6218941 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 8 |
| Conread position: | 264-441 |
| Cow position: | chr29:14373995-14373820 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 264-446 |
| Cow position: | chr29:14082229-14082047 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 267-438 |
| Cow position: | chr29:45626023-45626194 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 267-440 |
| Cow position: | chr29:22279055-22279227 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 33 |
| Conread position: | 267-440 |
| Cow position: | chr29:34738012-34737838 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 268-447 |
| Cow position: | chr29:22284742-22284922 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 269-440 |
| Cow position: | chr29:13026895-13027064 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 144 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 274-415 |
| Cow position: | chr29:14500553-14500694 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-432 |
| Cow position: | chr29:9963140-9963299 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 52 |
| Conread position: | 276-440 |
| Cow position: | chr29:13612163-13611999 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-443 |
| Cow position: | chr29:21254647-21254814 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-445 |
| Cow position: | chr29:2886958-2886802 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 295-440 |
| Cow position: | chr29:32291308-32291449 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 305-447 |
| Cow position: | chr29:42806709-42806852 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 306-440 |
| Cow position: | chr29:10820995-10820862 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 311-436 |
| Cow position: | chr29:4658719-4658844 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-440 |
| Cow position: | chr29:16064448-16064564 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 333-440 |
| Cow position: | chr29:32352364-32352471 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-440 |
| Cow position: | chr29:1577222-1577117 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.