Cow genome map


           Conread name:
           Ss1.1-Utr1-UTR01G110089.5
        

               Conread position:
               1-166
               

               Cow position:
               chr3:11680405-11680240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               139
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-373
               

               Cow position:
               chr3:11679996-11679789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-522
               

               Cow position:
               chr3:11679545-11679396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               140
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               518-601
               

               Cow position:
               chr3:11679224-11679141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               600-718
               

               Cow position:
               chr3:11678772-11678654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               113
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               693-822
               

               Cow position:
               chr3:11678470-11678342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               806-929
               

               Cow position:
               chr3:11678172-11678053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 0
               
Show alignments to all cow chromosomes.