Cow genome map


           Conread name:
           Ss1.1-Utr2-C0001803_K01.5
        

               Conread position:
               3-101
               

               Cow position:
               chr28:24937169-24937071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-193
               

               Cow position:
               chr28:24935484-24935391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               193-303
               

               Cow position:
               chr28:24917101-24916991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               300-412
               

               Cow position:
               chr28:24913980-24913868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               408-501
               

               Cow position:
               chr28:24912137-24912045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               491-563
               

               Cow position:
               chr28:24908598-24908526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               73
               

               Alignm identity:
               69
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-718
               

               Cow position:
               chr28:24902798-24902641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               689-829
               

               Cow position:
               chr28:24865934-24865795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               131
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 5
               
Show alignments to all cow chromosomes.