Cow genome map
| Conread name: | Ss1.1-Utr2-C0001815_L04.5 |
| Conread position: | 231-481 |
| Cow position: | chr13:47576139-47576385 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 231-564 |
| Cow position: | chr13:15447435-15447120 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 177, 18 |
| Conread position: | 231-576 |
| Cow position: | chr13:19637192-19637533 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 18 |
| Conread position: | 232-391 |
| Cow position: | chr13:6359888-6360047 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 232-391 |
| Cow position: | chr13:16921503-16921661 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-391 |
| Cow position: | chr13:32321535-32321376 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 232-431 |
| Cow position: | chr13:60511619-60511820 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-435 |
| Cow position: | chr13:9299930-9300129 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-446 |
| Cow position: | chr13:21838171-21837956 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-457 |
| Cow position: | chr13:21698321-21698547 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-461 |
| Cow position: | chr13:8069111-8068880 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-466 |
| Cow position: | chr13:19044518-19044286 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 232-476 |
| Cow position: | chr13:36867953-36868195 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-517 |
| Cow position: | chr13:4855146-4855429 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 232-525 |
| Cow position: | chr13:7049693-7049978 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 232-552 |
| Cow position: | chr13:4735320-4735641 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 18 |
| Conread position: | 232-559 |
| Cow position: | chr13:16817120-16817448 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 232-561 |
| Cow position: | chr13:26846534-26846851 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-561 |
| Cow position: | chr13:41276850-41277183 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-562 |
| Cow position: | chr13:43032775-43033096 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 232-563 |
| Cow position: | chr13:4485896-4486229 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-563 |
| Cow position: | chr13:15279748-15279417 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-563 |
| Cow position: | chr13:21400885-21401220 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-563 |
| Cow position: | chr13:30305239-30305567 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-563 |
| Cow position: | chr13:34040301-34039966 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 232-563 |
| Cow position: | chr13:60698751-60698426 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 232-564 |
| Cow position: | chr13:47368209-47368549 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 232-566 |
| Cow position: | chr13:562345-562009 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:679822-680153 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:3023238-3022903 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:3692905-3692569 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:4733576-4733911 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 18 |
| Conread position: | 232-566 |
| Cow position: | chr13:11389249-11389585 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:11737798-11738134 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:49613491-49613162 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr13:50191584-50191247 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 232-567 |
| Cow position: | chr13:22274854-22275190 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 232-571 |
| Cow position: | chr13:5230900-5230566 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:2507226-2507554 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:5499936-5499600 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:17310461-17310804 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:17537605-17537950 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 232-575 |
| Cow position: | chr13:19565759-19566105 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:23455481-23455826 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:24932750-24932406 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:33169724-33169402 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:33523914-33523569 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-575 |
| Cow position: | chr13:35539207-35539553 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:4943430-4943773 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:6666095-6665746 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 232-576 |
| Cow position: | chr13:13901909-13902249 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:14401056-14400732 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:18331064-18330738 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 224, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:19394964-19394640 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:20539801-20539478 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 232-576 |
| Cow position: | chr13:30240600-30240939 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:30470321-30469988 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:30653241-30652897 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:32548802-32549147 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:32735142-32734799 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:33334300-33333960 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:34343955-34344299 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:34509765-34509428 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:34870006-34870349 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 232-576 |
| Cow position: | chr13:36348072-36347732 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 17 |
| Conread position: | 232-576 |
| Cow position: | chr13:54239383-54239040 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 233-556 |
| Cow position: | chr13:6440916-6441225 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 233-562 |
| Cow position: | chr13:31508954-31509287 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 16 |
| Conread position: | 233-576 |
| Cow position: | chr13:3481814-3481476 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 16 |
| Conread position: | 235-376 |
| Cow position: | chr13:54312149-54312288 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 235-451 |
| Cow position: | chr13:21854371-21854577 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 235-475 |
| Cow position: | chr13:11762590-11762349 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 235-481 |
| Cow position: | chr13:1635618-1635869 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-557 |
| Cow position: | chr13:23404432-23404117 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 155, 8 |
| Conread position: | 235-559 |
| Cow position: | chr13:25381451-25381774 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 235-561 |
| Cow position: | chr13:24236621-24236937 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-563 |
| Cow position: | chr13:15922410-15922083 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-563 |
| Cow position: | chr13:31728851-31728523 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 235-565 |
| Cow position: | chr13:30089226-30089565 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 235-575 |
| Cow position: | chr13:3313682-3314013 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 127, 14 |
| Conread position: | 235-575 |
| Cow position: | chr13:13326988-13327325 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-575 |
| Cow position: | chr13:44463886-44463547 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 235-575 |
| Cow position: | chr13:50111514-50111856 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-575 |
| Cow position: | chr13:60647534-60647198 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-575 |
| Cow position: | chr13:61953287-61953625 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-576 |
| Cow position: | chr13:669292-669634 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 235-576 |
| Cow position: | chr13:41338604-41338275 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 236-481 |
| Cow position: | chr13:20573043-20572803 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 236-530 |
| Cow position: | chr13:3652214-3651920 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 236-566 |
| Cow position: | chr13:49975724-49976047 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-576 |
| Cow position: | chr13:37833844-37833505 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 237-539 |
| Cow position: | chr13:39922663-39922379 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 189, 12 |
| Conread position: | 237-566 |
| Cow position: | chr13:49194666-49194342 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 13 |
| Conread position: | 237-572 |
| Cow position: | chr13:5288069-5288395 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 237-576 |
| Cow position: | chr13:21879764-21879416 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 257 |
| Conread position: | 238-569 |
| Cow position: | chr13:34050748-34051080 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 11 |
| Conread position: | 238-575 |
| Cow position: | chr13:38076244-38075910 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 248 |
| Conread position: | 239-566 |
| Cow position: | chr13:59404101-59403770 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 151, 10 |
| Conread position: | 239-575 |
| Cow position: | chr13:8649283-8649613 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 241-490 |
| Cow position: | chr13:44650864-44650613 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 167, 40 |
| Conread position: | 241-566 |
| Cow position: | chr13:26589035-26588709 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 119 |
| Conread position: | 244-566 |
| Cow position: | chr13:60921699-60921395 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 246-561 |
| Cow position: | chr13:44324905-44324580 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 246-563 |
| Cow position: | chr13:21906879-21906562 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 246-566 |
| Cow position: | chr13:28527850-28527529 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 246-566 |
| Cow position: | chr13:32983343-32983020 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 246-575 |
| Cow position: | chr13:22480059-22480389 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 5 |
| Conread position: | 246-576 |
| Cow position: | chr13:36105190-36105526 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 150, 111 |
| Conread position: | 247-491 |
| Cow position: | chr13:34906467-34906228 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 143, 9 |
| Conread position: | 247-575 |
| Cow position: | chr13:30795631-30795307 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 160, 26 |
| Conread position: | 247-576 |
| Cow position: | chr13:5516268-5515939 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 93 |
| Conread position: | 247-576 |
| Cow position: | chr13:11827665-11827339 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 143, 90 |
| Conread position: | 247-576 |
| Cow position: | chr13:15559393-15559723 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 16 |
| Conread position: | 247-576 |
| Cow position: | chr13:32923214-32922885 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 142 |
| Conread position: | 247-576 |
| Cow position: | chr13:35759615-35759945 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 218 |
| Conread position: | 250-576 |
| Cow position: | chr13:1142415-1142083 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 143, 207 |
| Conread position: | 251-545 |
| Cow position: | chr13:34688503-34688208 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 251-553 |
| Cow position: | chr13:14646449-14646140 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 255-511 |
| Cow position: | chr13:21851928-21852183 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 255-567 |
| Cow position: | chr13:12732917-12732602 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 255-575 |
| Cow position: | chr13:2872999-2872679 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 180 |
| Conread position: | 255-575 |
| Cow position: | chr13:3533916-3533595 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 155, 193 |
| Conread position: | 256-558 |
| Cow position: | chr13:30036214-30035916 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 160 |
| Conread position: | 257-564 |
| Cow position: | chr13:43591347-43591648 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 150, 47 |
| Conread position: | 258-496 |
| Cow position: | chr13:31334577-31334341 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 258-558 |
| Cow position: | chr13:1047977-1047678 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 132, 70 |
| Conread position: | 263-566 |
| Cow position: | chr13:3555483-3555789 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 277-532 |
| Cow position: | chr13:17480656-17480390 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 281-563 |
| Cow position: | chr13:9376983-9376705 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 109, 155 |
| Conread position: | 283-567 |
| Cow position: | chr13:11350498-11350781 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 164 |
| Conread position: | 286-546 |
| Cow position: | chr13:26409125-26409391 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 286-566 |
| Cow position: | chr13:394020-393750 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 290-557 |
| Cow position: | chr13:27470065-27470333 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 297-563 |
| Cow position: | chr13:19449426-19449690 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 94, 55 |
| Conread position: | 302-575 |
| Cow position: | chr13:36244800-36244517 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 305-575 |
| Cow position: | chr13:32079978-32080251 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 305-575 |
| Cow position: | chr13:51182901-51183169 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 306-566 |
| Cow position: | chr13:51466081-51465821 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 308-575 |
| Cow position: | chr13:34763857-34763589 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 85, 208 |
| Conread position: | 314-566 |
| Cow position: | chr13:19230585-19230335 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 318-566 |
| Cow position: | chr13:31379686-31379930 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 111 |
| Conread position: | 318-575 |
| Cow position: | chr13:47569227-47569490 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 319-566 |
| Cow position: | chr13:31731433-31731190 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 320-575 |
| Cow position: | chr13:18122742-18122484 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 322-563 |
| Cow position: | chr13:1883353-1883113 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 181 |
| Conread position: | 325-566 |
| Cow position: | chr13:22614772-22615012 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 333-575 |
| Cow position: | chr13:2581940-2581706 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 335-563 |
| Cow position: | chr13:34088350-34088575 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 336-566 |
| Cow position: | chr13:46528553-46528776 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 344-576 |
| Cow position: | chr13:51769462-51769691 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 60 |
| Conread position: | 355-575 |
| Cow position: | chr13:36671819-36672043 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 358-576 |
| Cow position: | chr13:22215219-22215003 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 372-576 |
| Cow position: | chr13:32794886-32795091 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 373-544 |
| Cow position: | chr13:19115216-19115042 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 391-566 |
| Cow position: | chr13:6360071-6360244 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 392-566 |
| Cow position: | chr13:47729236-47729412 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 395-566 |
| Cow position: | chr13:51006819-51006646 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 415-575 |
| Cow position: | chr13:17062072-17062231 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 416-566 |
| Cow position: | chr13:644745-644595 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-566 |
| Cow position: | chr13:43891472-43891611 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-576 |
| Cow position: | chr13:2475363-2475513 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 431-576 |
| Cow position: | chr13:9300414-9300559 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 431-576 |
| Cow position: | chr13:12658867-12659013 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 440-576 |
| Cow position: | chr13:37489311-37489175 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-576 |
| Cow position: | chr13:25881503-25881632 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 445-575 |
| Cow position: | chr13:22080902-22080773 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.