Cow genome map

Conread name: Ss1.1-Utr2-C0001815_L04.5

Conread position: 161-576
Cow position: chr16:31424338-31424762 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 25

Conread position: 214-566
Cow position: chr16:42131003-42131350 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 13

Conread position: 228-563
Cow position: chr16:20203566-20203901 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 21

Conread position: 231-457
Cow position: chr16:10770451-10770674 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 146, 18

Conread position: 231-563
Cow position: chr16:24811527-24811859 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 14

Conread position: 232-376
Cow position: chr16:15568826-15568966 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 232-391
Cow position: chr16:28469212-28469054 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 232-415
Cow position: chr16:55149805-55149985 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 159, 17

Conread position: 232-434
Cow position: chr16:25443201-25443404 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 17

Conread position: 232-457
Cow position: chr16:25126981-25126757 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 185, 17

Conread position: 232-478
Cow position: chr16:27980802-27980557 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 17

Conread position: 232-481
Cow position: chr16:16031485-16031731 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 17

Conread position: 232-481
Cow position: chr16:56915537-56915290 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 17

Conread position: 232-500
Cow position: chr16:2890944-2890674 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 232-512
Cow position: chr16:49254680-49254402 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 158, 17

Conread position: 232-536
Cow position: chr16:3348376-3348681 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 82, 17

Conread position: 232-546
Cow position: chr16:41572966-41573290 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 117, 10

Conread position: 232-556
Cow position: chr16:25948734-25948416 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 291, 17

Conread position: 232-559
Cow position: chr16:8814536-8814207 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 17

Conread position: 232-559
Cow position: chr16:19672794-19672463 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 10

Conread position: 232-560
Cow position: chr16:43693422-43693751 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 213
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 123

Conread position: 232-560
Cow position: chr16:52518542-52518861 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 181, 18

Conread position: 232-562
Cow position: chr16:6298931-6298595 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 143, 23

Conread position: 232-562
Cow position: chr16:7674891-7674559 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 232-562
Cow position: chr16:16268313-16267994 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 161, 17

Conread position: 232-562
Cow position: chr16:37479283-37478961 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 232-563
Cow position: chr16:2237200-2236869 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-563
Cow position: chr16:2725651-2725319 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-563
Cow position: chr16:3331485-3331811 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 17

Conread position: 232-563
Cow position: chr16:16992621-16992950 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 160, 17

Conread position: 232-563
Cow position: chr16:25087185-25087511 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 232-563
Cow position: chr16:40294594-40294270 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 165, 17

Conread position: 232-564
Cow position: chr16:14663734-14663402 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-564
Cow position: chr16:19275706-19276032 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 160, 17

Conread position: 232-564
Cow position: chr16:23365339-23365010 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 176, 18

Conread position: 232-564
Cow position: chr16:25955994-25955672 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 17

Conread position: 232-565
Cow position: chr16:41161896-41161567 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr16:6944846-6945160 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr16:11284792-11285121 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr16:20277421-20277757 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr16:20408595-20408273 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 0

Conread position: 232-566
Cow position: chr16:21188802-21189138 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr16:23876956-23876626 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr16:24622127-24621794 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr16:26652187-26652523 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr16:28168750-28168414 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr16:29048598-29048934 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr16:47475589-47475919 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 144, 17

Conread position: 232-566
Cow position: chr16:47787526-47787862 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr16:53446203-53445867 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-574
Cow position: chr16:51086354-51086694 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 17

Conread position: 232-575
Cow position: chr16:34113-34456 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 17

Conread position: 232-575
Cow position: chr16:1433759-1434109 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 146, 17

Conread position: 232-575
Cow position: chr16:4799148-4798829 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 232-575
Cow position: chr16:10374112-10373769 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 232-575
Cow position: chr16:22800102-22799757 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 232-575
Cow position: chr16:25934728-25935065 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 17

Conread position: 232-575
Cow position: chr16:26991380-26991035 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 17

Conread position: 232-575
Cow position: chr16:28023452-28023112 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 162, 17

Conread position: 232-575
Cow position: chr16:29207650-29207300 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr16:36240727-36241059 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr16:49743859-49743518 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 17

Conread position: 232-576
Cow position: chr16:1566100-1565763 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr16:1862021-1862357 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:2409320-2408981 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:3031928-3031588 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 17

Conread position: 232-576
Cow position: chr16:3144821-3144485 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 17

Conread position: 232-576
Cow position: chr16:3770441-3770097 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 232-576
Cow position: chr16:4425663-4426007 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:5487337-5487684 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 232-576
Cow position: chr16:7466181-7466527 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:12536378-12536023 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 17

Conread position: 232-576
Cow position: chr16:15186640-15186981 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:15980814-15980472 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 232-576
Cow position: chr16:18617559-18617224 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:23250408-23250074 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 131, 17

Conread position: 232-576
Cow position: chr16:23984878-23985224 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr16:25343544-25343890 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr16:27731811-27731468 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr16:29035470-29035811 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 83, 13

Conread position: 232-576
Cow position: chr16:32325422-32325769 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 232-576
Cow position: chr16:34505267-34505611 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 232-576
Cow position: chr16:39035130-39034789 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr16:43895692-43895349 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr16:46521481-46521136 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 232-576
Cow position: chr16:54323752-54323406 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 18

Conread position: 233-534
Cow position: chr16:38533733-38533423 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 9

Conread position: 233-558
Cow position: chr16:43771077-43771388 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 12

Conread position: 233-576
Cow position: chr16:2273632-2273976 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 177, 16

Conread position: 235-446
Cow position: chr16:818285-818496 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 143, 14

Conread position: 235-470
Cow position: chr16:41822439-41822670 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 164, 7

Conread position: 235-475
Cow position: chr16:25463333-25463095 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 155, 14

Conread position: 235-551
Cow position: chr16:7647574-7647888 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 105, 10

Conread position: 235-553
Cow position: chr16:28435565-28435245 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 155, 14

Conread position: 235-561
Cow position: chr16:14682078-14681756 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 211
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 14

Conread position: 235-563
Cow position: chr16:42804333-42804655 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 235-565
Cow position: chr16:23719817-23719494 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 15

Conread position: 235-566
Cow position: chr16:24406487-24406819 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 235-566
Cow position: chr16:27595093-27595422 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 235-566
Cow position: chr16:42162319-42162647 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 235-575
Cow position: chr16:9024126-9024471 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 42

Conread position: 235-575
Cow position: chr16:20642080-20642420 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 235-575
Cow position: chr16:28194729-28194387 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 235-575
Cow position: chr16:41032874-41033216 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 235-576
Cow position: chr16:16239524-16239185 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 155, 14

Conread position: 235-576
Cow position: chr16:31587125-31586783 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 235-576
Cow position: chr16:52525805-52526145 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 10

Conread position: 236-350
Cow position: chr16:39365308-39365195 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 236-455
Cow position: chr16:43845644-43845425 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 13

Conread position: 236-551
Cow position: chr16:40841985-40842299 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 13

Conread position: 236-560
Cow position: chr16:26653252-26653574 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 170, 13

Conread position: 236-563
Cow position: chr16:10439823-10440143 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 13

Conread position: 236-566
Cow position: chr16:14620685-14620376 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 178, 15

Conread position: 236-575
Cow position: chr16:624953-625284 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 160, 13

Conread position: 236-575
Cow position: chr16:23672184-23672525 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 154, 13

Conread position: 236-575
Cow position: chr16:47402958-47403296 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 13

Conread position: 237-429
Cow position: chr16:19343173-19342980 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 153, 6

Conread position: 237-564
Cow position: chr16:5891589-5891907 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 237-567
Cow position: chr16:42058559-42058898 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 13

Conread position: 237-575
Cow position: chr16:16229881-16230224 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 171, 12

Conread position: 237-576
Cow position: chr16:194325-193997 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 156, 12

Conread position: 237-576
Cow position: chr16:20200705-20201035 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 155, 12

Conread position: 238-462
Cow position: chr16:21812101-21812327 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 164, 5

Conread position: 238-556
Cow position: chr16:5654756-5655071 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 152, 11

Conread position: 239-477
Cow position: chr16:5589953-5590182 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 154, 17

Conread position: 239-556
Cow position: chr16:20635933-20635620 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 10

Conread position: 247-553
Cow position: chr16:20666781-20667085 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 136, 16

Conread position: 247-564
Cow position: chr16:37443937-37443618 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 255

Conread position: 247-564
Cow position: chr16:41684705-41684390 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 54

Conread position: 247-576
Cow position: chr16:838871-839197 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 63

Conread position: 247-576
Cow position: chr16:25455876-25455548 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 47

Conread position: 247-576
Cow position: chr16:26665313-26665630 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 125, 11

Conread position: 248-481
Cow position: chr16:18667930-18668170 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 20

Conread position: 248-547
Cow position: chr16:55912177-55911878 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 88

Conread position: 248-567
Cow position: chr16:52626957-52627279 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 145, 23

Conread position: 249-576
Cow position: chr16:41165168-41164846 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 147, 55

Conread position: 250-543
Cow position: chr16:9589156-9589451 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 25, 85

Conread position: 250-566
Cow position: chr16:36164357-36164667 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 97

Conread position: 250-576
Cow position: chr16:3149436-3149117 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 90

Conread position: 253-563
Cow position: chr16:18496151-18495844 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 158, 55

Conread position: 253-566
Cow position: chr16:32836510-32836824 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 77, 82

Conread position: 253-575
Cow position: chr16:30999822-31000141 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 99

Conread position: 258-564
Cow position: chr16:46224958-46224652 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 143, 106

Conread position: 258-576
Cow position: chr16:44128233-44127926 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 34

Conread position: 258-576
Cow position: chr16:52590111-52589798 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 135, 52

Conread position: 259-566
Cow position: chr16:34207490-34207792 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 79, 51

Conread position: 260-575
Cow position: chr16:4847317-4846991 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 277

Conread position: 263-563
Cow position: chr16:51402251-51401949 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 90

Conread position: 265-575
Cow position: chr16:3010442-3010748 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 125, 65

Conread position: 266-576
Cow position: chr16:42735024-42734714 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 117

Conread position: 267-576
Cow position: chr16:25172888-25173187 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 34

Conread position: 267-576
Cow position: chr16:30050675-30050970 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 55

Conread position: 272-575
Cow position: chr16:23097584-23097282 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 242

Conread position: 275-561
Cow position: chr16:5875961-5876243 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 47

Conread position: 275-576
Cow position: chr16:2481505-2481204 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 17, 67

Conread position: 277-575
Cow position: chr16:5526490-5526193 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 60, 53

Conread position: 278-563
Cow position: chr16:48103710-48103992 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 119, 51

Conread position: 278-576
Cow position: chr16:15494085-15494374 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 276, 100

Conread position: 281-560
Cow position: chr16:46055655-46055941 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 64

Conread position: 283-575
Cow position: chr16:33923469-33923175 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 53

Conread position: 287-457
Cow position: chr16:14440281-14440448 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 46

Conread position: 288-575
Cow position: chr16:9417063-9416780 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 105, 191

Conread position: 290-576
Cow position: chr16:15411420-15411138 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 50

Conread position: 294-566
Cow position: chr16:4388365-4388640 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 305-576
Cow position: chr16:34531948-34532216 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 25

Conread position: 318-563
Cow position: chr16:5633653-5633412 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 112

Conread position: 319-560
Cow position: chr16:5762437-5762681 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 332-576
Cow position: chr16:49220289-49220045 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 12

Conread position: 335-575
Cow position: chr16:55866395-55866638 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 201

Conread position: 336-566
Cow position: chr16:54181464-54181250 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 11

Conread position: 342-565
Cow position: chr16:11634475-11634250 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 355-564
Cow position: chr16:45705102-45704890 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 192

Conread position: 358-563
Cow position: chr16:10966516-10966313 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 155

Conread position: 363-575
Cow position: chr16:50875110-50874900 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 7

Conread position: 365-566
Cow position: chr16:5528889-5529093 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 365-575
Cow position: chr16:29157358-29157570 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 365-576
Cow position: chr16:2303828-2304042 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 366-575
Cow position: chr16:15811769-15811981 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 380-575
Cow position: chr16:25167807-25168002 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 146

Conread position: 386-566
Cow position: chr16:26092170-26091990 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 10

Conread position: 396-566
Cow position: chr16:4749109-4748939 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 133

Conread position: 402-563
Cow position: chr16:416641-416796 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 404-576
Cow position: chr16:6647052-6647224 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 105

Conread position: 406-576
Cow position: chr16:20969056-20968885 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 408-576
Cow position: chr16:4462580-4462412 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 408-576
Cow position: chr16:15569518-15569683 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 416-576
Cow position: chr16:12161525-12161364 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.