Cow genome map
| Conread name: | Ss1.1-Utr2-C0001815_L04.5 |
| Conread position: | 24-481 |
| Cow position: | chr17:1704911-1704451 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 366, 0 |
| Conread position: | 231-525 |
| Cow position: | chr17:4162314-4162006 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 231-576 |
| Cow position: | chr17:4062471-4062811 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 232-376 |
| Cow position: | chr17:23721412-23721553 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-383 |
| Cow position: | chr17:22562043-22562189 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-391 |
| Cow position: | chr17:25463125-25463283 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-446 |
| Cow position: | chr17:34574894-34575110 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-521 |
| Cow position: | chr17:11085543-11085255 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-523 |
| Cow position: | chr17:2554125-2553832 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-529 |
| Cow position: | chr17:33283198-33282907 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-534 |
| Cow position: | chr17:41411986-41412282 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 232-538 |
| Cow position: | chr17:20079746-20079442 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 177, 17 |
| Conread position: | 232-554 |
| Cow position: | chr17:1563374-1563693 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-556 |
| Cow position: | chr17:43146439-43146114 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-562 |
| Cow position: | chr17:17257655-17257983 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-563 |
| Cow position: | chr17:136776-137108 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-563 |
| Cow position: | chr17:2176115-2176449 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 232-563 |
| Cow position: | chr17:14241952-14242293 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 232-563 |
| Cow position: | chr17:16855965-16855629 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 232-563 |
| Cow position: | chr17:24310981-24311306 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 17 |
| Conread position: | 232-564 |
| Cow position: | chr17:13706912-13707217 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 232-564 |
| Cow position: | chr17:14294409-14294079 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 232-564 |
| Cow position: | chr17:21714132-21714452 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 176, 17 |
| Conread position: | 232-565 |
| Cow position: | chr17:14214901-14214566 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 232-566 |
| Cow position: | chr17:451971-452304 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:1570250-1569918 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:3742296-3742632 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:5307603-5307267 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:6080650-6080978 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:8210790-8211123 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:11785029-11785349 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-566 |
| Cow position: | chr17:13418536-13418872 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:15437931-15438267 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:15709857-15709521 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr17:19979989-19979658 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-567 |
| Cow position: | chr17:21768975-21768641 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-573 |
| Cow position: | chr17:34566925-34567273 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 232-575 |
| Cow position: | chr17:147063-147411 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 10 |
| Conread position: | 232-575 |
| Cow position: | chr17:240425-240769 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 232-575 |
| Cow position: | chr17:5999353-5999009 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 232-575 |
| Cow position: | chr17:23322291-23321950 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-575 |
| Cow position: | chr17:24784308-24784647 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-575 |
| Cow position: | chr17:35300397-35300058 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-576 |
| Cow position: | chr17:6261998-6262342 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 232-576 |
| Cow position: | chr17:11381055-11380708 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 232-576 |
| Cow position: | chr17:15327421-15327760 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 98 |
| Conread position: | 232-576 |
| Cow position: | chr17:16903022-16903364 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr17:18124792-18124458 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 232-576 |
| Cow position: | chr17:20085633-20085297 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-576 |
| Cow position: | chr17:24027852-24027515 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr17:29825829-29825489 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 232-576 |
| Cow position: | chr17:38828044-38828395 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 233-478 |
| Cow position: | chr17:8496794-8496553 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 235-354 |
| Cow position: | chr17:29302913-29303031 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 235-477 |
| Cow position: | chr17:17068923-17069166 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 235-529 |
| Cow position: | chr17:2245906-2245614 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 235-549 |
| Cow position: | chr17:2170547-2170855 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-550 |
| Cow position: | chr17:2032376-2032688 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 156, 14 |
| Conread position: | 235-558 |
| Cow position: | chr17:41011723-41012044 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 235-563 |
| Cow position: | chr17:4084165-4084482 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 235-563 |
| Cow position: | chr17:15852846-15853189 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 235-564 |
| Cow position: | chr17:252961-253289 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-572 |
| Cow position: | chr17:1882408-1882745 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 235-575 |
| Cow position: | chr17:8204072-8204407 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 235-575 |
| Cow position: | chr17:15808109-15808452 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 235-575 |
| Cow position: | chr17:21420090-21420427 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-575 |
| Cow position: | chr17:27792630-27792302 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-576 |
| Cow position: | chr17:6070682-6071014 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-576 |
| Cow position: | chr17:25738436-25738779 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 7 |
| Conread position: | 236-436 |
| Cow position: | chr17:19216568-19216371 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 236-480 |
| Cow position: | chr17:28026352-28026105 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 236-560 |
| Cow position: | chr17:13930031-13930357 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 7 |
| Conread position: | 236-562 |
| Cow position: | chr17:16897951-16897632 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-575 |
| Cow position: | chr17:1705539-1705878 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 6 |
| Conread position: | 236-575 |
| Cow position: | chr17:15141193-15140865 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-576 |
| Cow position: | chr17:2264329-2264667 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 237-566 |
| Cow position: | chr17:1655608-1655282 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 237-566 |
| Cow position: | chr17:3203207-3202882 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 154, 12 |
| Conread position: | 237-575 |
| Cow position: | chr17:7561816-7561478 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 238-562 |
| Cow position: | chr17:10322116-10322427 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 35 |
| Conread position: | 246-535 |
| Cow position: | chr17:14306178-14305896 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 144, 130 |
| Conread position: | 246-564 |
| Cow position: | chr17:5045055-5044748 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 144, 82 |
| Conread position: | 246-566 |
| Cow position: | chr17:40451-40774 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 247-436 |
| Cow position: | chr17:22253805-22253621 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 247-534 |
| Cow position: | chr17:15720607-15720891 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 142, 83 |
| Conread position: | 247-563 |
| Cow position: | chr17:1785850-1785546 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 143, 92 |
| Conread position: | 247-571 |
| Cow position: | chr17:45704411-45704732 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 247-576 |
| Cow position: | chr17:22107496-22107164 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 248-560 |
| Cow position: | chr17:604907-604601 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 148, 20 |
| Conread position: | 248-560 |
| Cow position: | chr17:13690252-13689937 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 159, 273 |
| Conread position: | 248-564 |
| Cow position: | chr17:20490471-20490780 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 249-576 |
| Cow position: | chr17:1458539-1458873 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 250-575 |
| Cow position: | chr17:3606565-3606235 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 43, 280 |
| Conread position: | 252-391 |
| Cow position: | chr17:8365759-8365901 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 252-575 |
| Cow position: | chr17:36000526-36000226 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 253-530 |
| Cow position: | chr17:4782189-4781910 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 193 |
| Conread position: | 255-575 |
| Cow position: | chr17:15649070-15649384 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 256-562 |
| Cow position: | chr17:20098150-20097850 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 133, 44 |
| Conread position: | 256-568 |
| Cow position: | chr17:9901156-9901467 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 126, 188 |
| Conread position: | 256-575 |
| Cow position: | chr17:10842442-10842746 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 136, 61 |
| Conread position: | 256-575 |
| Cow position: | chr17:17530315-17530656 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 256-576 |
| Cow position: | chr17:2005262-2005561 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 151, 122 |
| Conread position: | 258-576 |
| Cow position: | chr17:732327-732011 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 260-564 |
| Cow position: | chr17:9751963-9752260 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 267-575 |
| Cow position: | chr17:29130665-29130355 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 273-541 |
| Cow position: | chr17:4210196-4210459 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 120, 82 |
| Conread position: | 282-558 |
| Cow position: | chr17:18590612-18590888 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 286-561 |
| Cow position: | chr17:44402553-44402815 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 288-553 |
| Cow position: | chr17:14393848-14394120 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 241 |
| Conread position: | 288-576 |
| Cow position: | chr17:14030658-14030366 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 288-576 |
| Cow position: | chr17:20232936-20233227 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 291-516 |
| Cow position: | chr17:37455136-37454909 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 214 |
| Conread position: | 294-576 |
| Cow position: | chr17:41480424-41480154 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 113, 41 |
| Conread position: | 305-576 |
| Cow position: | chr17:18100874-18100602 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 91, 48 |
| Conread position: | 310-564 |
| Cow position: | chr17:4569471-4569720 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 43 |
| Conread position: | 310-564 |
| Cow position: | chr17:39950855-39950597 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 310-575 |
| Cow position: | chr17:41812441-41812699 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 313-553 |
| Cow position: | chr17:38617289-38617536 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 318-560 |
| Cow position: | chr17:11188567-11188809 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 319-575 |
| Cow position: | chr17:17127189-17127448 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 335-549 |
| Cow position: | chr17:33290736-33290514 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 341-563 |
| Cow position: | chr17:16119987-16119765 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 379-566 |
| Cow position: | chr17:3550963-3550781 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 380-576 |
| Cow position: | chr17:22562428-22562627 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 389-570 |
| Cow position: | chr17:18197162-18197344 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 168 |
| Conread position: | 407-563 |
| Cow position: | chr17:14898592-14898748 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-566 |
| Cow position: | chr17:19216111-19215952 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 409-566 |
| Cow position: | chr17:17345220-17345376 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 421-566 |
| Cow position: | chr17:22253364-22253218 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 427-567 |
| Cow position: | chr17:20694530-20694670 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-575 |
| Cow position: | chr17:3314432-3314579 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 431-576 |
| Cow position: | chr17:8222024-8222169 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 8 |
Show alignments to all cow chromosomes.