Cow genome map
| Conread name: | Ss1.1-Utr2-C0001815_L04.5 |
| Conread position: | 228-575 |
| Cow position: | chr21:29000375-29000704 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 231-481 |
| Cow position: | chr21:45907262-45907017 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 162, 12 |
| Conread position: | 231-564 |
| Cow position: | chr21:2538718-2538385 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 232-350 |
| Cow position: | chr21:19613193-19613310 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-379 |
| Cow position: | chr21:19352357-19352503 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-381 |
| Cow position: | chr21:25126234-25126381 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 232-383 |
| Cow position: | chr21:11508043-11508192 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 232-391 |
| Cow position: | chr21:4899744-4899585 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 232-406 |
| Cow position: | chr21:7038781-7038955 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-423 |
| Cow position: | chr21:29949531-29949340 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-449 |
| Cow position: | chr21:47976268-47976487 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 116, 17 |
| Conread position: | 232-469 |
| Cow position: | chr21:37123924-37123687 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-481 |
| Cow position: | chr21:9894580-9894832 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 232-497 |
| Cow position: | chr21:27610310-27610051 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-518 |
| Cow position: | chr21:38242439-38242152 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 232-522 |
| Cow position: | chr21:36978471-36978185 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-538 |
| Cow position: | chr21:39427508-39427816 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 232-551 |
| Cow position: | chr21:49092006-49091686 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 232-552 |
| Cow position: | chr21:28853414-28853097 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 232-558 |
| Cow position: | chr21:21171856-21171546 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-560 |
| Cow position: | chr21:4091769-4092095 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-560 |
| Cow position: | chr21:30352379-30352719 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 157, 26 |
| Conread position: | 232-561 |
| Cow position: | chr21:15248249-15247917 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 232-561 |
| Cow position: | chr21:36981081-36981399 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 196, 17 |
| Conread position: | 232-561 |
| Cow position: | chr21:49297256-49297588 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 232-562 |
| Cow position: | chr21:21025908-21026246 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 232-562 |
| Cow position: | chr21:31251441-31251759 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 161, 24 |
| Conread position: | 232-562 |
| Cow position: | chr21:31513885-31513553 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 17 |
| Conread position: | 232-563 |
| Cow position: | chr21:3781209-3781551 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-563 |
| Cow position: | chr21:22943048-22943381 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 232-564 |
| Cow position: | chr21:2418638-2418963 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-564 |
| Cow position: | chr21:21051154-21051494 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 232-564 |
| Cow position: | chr21:22751037-22750686 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 232-564 |
| Cow position: | chr21:26739605-26739278 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 232-564 |
| Cow position: | chr21:28614750-28615083 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-564 |
| Cow position: | chr21:46969248-46968917 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 133, 18 |
| Conread position: | 232-566 |
| Cow position: | chr21:5937896-5938229 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:6967028-6966705 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:7063238-7062902 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:11291121-11291456 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:26238472-26238786 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 232-566 |
| Cow position: | chr21:27149124-27148786 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:34902943-34902619 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:39225624-39225293 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr21:41797291-41796955 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 232-574 |
| Cow position: | chr21:650465-650111 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 232-575 |
| Cow position: | chr21:4078486-4078824 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 232-575 |
| Cow position: | chr21:4738107-4738437 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 232-575 |
| Cow position: | chr21:27621065-27620721 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-575 |
| Cow position: | chr21:32397619-32397274 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-575 |
| Cow position: | chr21:32831789-32831469 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-575 |
| Cow position: | chr21:37373658-37374001 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:41652-42000 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:2665707-2665362 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:3805359-3805698 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:4186380-4186725 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:26401318-26400989 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 232-576 |
| Cow position: | chr21:26700234-26699888 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:27068529-27068183 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:27285881-27286222 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:29002893-29002545 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:30596657-30596312 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr21:38019668-38020004 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 232-576 |
| Cow position: | chr21:44763524-44763184 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 233-576 |
| Cow position: | chr21:4596171-4595846 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 161, 18 |
| Conread position: | 235-383 |
| Cow position: | chr21:40269234-40269090 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 235-391 |
| Cow position: | chr21:48487200-48487354 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 235-472 |
| Cow position: | chr21:5011301-5011063 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 235-516 |
| Cow position: | chr21:16830828-16831097 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-548 |
| Cow position: | chr21:22462630-22462944 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-556 |
| Cow position: | chr21:13274111-13274431 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 235-556 |
| Cow position: | chr21:37040179-37039859 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 235-561 |
| Cow position: | chr21:47647771-47648097 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 235-563 |
| Cow position: | chr21:7154771-7155096 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-566 |
| Cow position: | chr21:36375423-36375756 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 235-566 |
| Cow position: | chr21:42916242-42916559 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 156, 14 |
| Conread position: | 235-567 |
| Cow position: | chr21:39093213-39093542 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 235-575 |
| Cow position: | chr21:2513289-2513623 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 235-575 |
| Cow position: | chr21:24083904-24083577 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-576 |
| Cow position: | chr21:4097101-4097432 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 156, 14 |
| Conread position: | 235-576 |
| Cow position: | chr21:5019581-5019923 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 14 |
| Conread position: | 235-576 |
| Cow position: | chr21:10569132-10569471 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 235-576 |
| Cow position: | chr21:13285362-13285699 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 235-576 |
| Cow position: | chr21:34656394-34656738 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 235-576 |
| Cow position: | chr21:48529983-48529644 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 7 |
| Conread position: | 236-553 |
| Cow position: | chr21:21622714-21623033 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 9 |
| Conread position: | 236-561 |
| Cow position: | chr21:20742226-20741905 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 236-561 |
| Cow position: | chr21:24647262-24647578 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 236-564 |
| Cow position: | chr21:46975623-46975309 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 236-575 |
| Cow position: | chr21:26634721-26634382 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-576 |
| Cow position: | chr21:995990-995657 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-576 |
| Cow position: | chr21:28987579-28987902 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 236-576 |
| Cow position: | chr21:31973526-31973196 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 13 |
| Conread position: | 238-539 |
| Cow position: | chr21:39080039-39079728 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 238-562 |
| Cow position: | chr21:29255048-29254726 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 11 |
| Conread position: | 238-576 |
| Cow position: | chr21:44531636-44531972 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 12 |
| Conread position: | 239-558 |
| Cow position: | chr21:5631535-5631217 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 241-575 |
| Cow position: | chr21:24948553-24948884 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 246-376 |
| Cow position: | chr21:44254067-44254197 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 246-556 |
| Cow position: | chr21:4190783-4191081 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 179, 25 |
| Conread position: | 246-557 |
| Cow position: | chr21:3587598-3587301 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 247-560 |
| Cow position: | chr21:4036698-4037009 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 247-564 |
| Cow position: | chr21:34256144-34255828 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 145, 98 |
| Conread position: | 247-567 |
| Cow position: | chr21:4271071-4270749 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 247-575 |
| Cow position: | chr21:47943401-47943724 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 146, 97 |
| Conread position: | 247-576 |
| Cow position: | chr21:2879378-2879050 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 100 |
| Conread position: | 247-576 |
| Cow position: | chr21:13112940-13112615 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 63 |
| Conread position: | 247-576 |
| Cow position: | chr21:28879266-28878939 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 99, 63 |
| Conread position: | 248-566 |
| Cow position: | chr21:4717390-4717705 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 103, 22 |
| Conread position: | 249-563 |
| Cow position: | chr21:24299073-24298763 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 144, 107 |
| Conread position: | 249-575 |
| Cow position: | chr21:1686697-1686374 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 133, 98 |
| Conread position: | 250-560 |
| Cow position: | chr21:4938108-4938416 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 167 |
| Conread position: | 250-575 |
| Cow position: | chr21:47033756-47033440 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 140, 29 |
| Conread position: | 250-576 |
| Cow position: | chr21:1194994-1195315 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 90 |
| Conread position: | 250-576 |
| Cow position: | chr21:2288526-2288864 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 111, 55 |
| Conread position: | 250-576 |
| Cow position: | chr21:27031700-27032016 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 250-576 |
| Cow position: | chr21:46290846-46291157 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 52 |
| Conread position: | 255-534 |
| Cow position: | chr21:35143451-35143171 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 255-560 |
| Cow position: | chr21:3922675-3922974 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 135, 180 |
| Conread position: | 255-566 |
| Cow position: | chr21:10285621-10285929 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 282, 72 |
| Conread position: | 255-575 |
| Cow position: | chr21:35390675-35390368 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 152, 121 |
| Conread position: | 256-576 |
| Cow position: | chr21:29909858-29909538 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 258-560 |
| Cow position: | chr21:32895740-32895451 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 130, 140 |
| Conread position: | 258-561 |
| Cow position: | chr21:32884970-32884676 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 130, 156 |
| Conread position: | 263-536 |
| Cow position: | chr21:7163519-7163243 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 148 |
| Conread position: | 263-575 |
| Cow position: | chr21:79544-79231 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 157 |
| Conread position: | 268-576 |
| Cow position: | chr21:33318036-33317726 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 273-564 |
| Cow position: | chr21:46881625-46881921 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 273-575 |
| Cow position: | chr21:15446109-15445795 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 273-575 |
| Cow position: | chr21:21132305-21132009 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 276-566 |
| Cow position: | chr21:4481771-4482064 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 145 |
| Conread position: | 278-564 |
| Cow position: | chr21:21917960-21918249 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 279-576 |
| Cow position: | chr21:17143154-17143454 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 294 |
| Conread position: | 283-567 |
| Cow position: | chr21:5594211-5594493 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 287-566 |
| Cow position: | chr21:40082051-40082319 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 37 |
| Conread position: | 288-529 |
| Cow position: | chr21:33984812-33984567 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 294-576 |
| Cow position: | chr21:10852761-10853042 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 102, 36 |
| Conread position: | 297-576 |
| Cow position: | chr21:3171077-3171347 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 107, 88 |
| Conread position: | 305-529 |
| Cow position: | chr21:30162744-30162521 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 177, 108 |
| Conread position: | 310-562 |
| Cow position: | chr21:45455459-45455716 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 310-565 |
| Cow position: | chr21:44075781-44076047 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 251 |
| Conread position: | 311-530 |
| Cow position: | chr21:24694667-24694873 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 313-575 |
| Cow position: | chr21:19352351-19352086 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 314-564 |
| Cow position: | chr21:15548356-15548108 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 320-563 |
| Cow position: | chr21:148664-148912 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 332-576 |
| Cow position: | chr21:33256086-33256332 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 335-526 |
| Cow position: | chr21:10519352-10519546 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 335-575 |
| Cow position: | chr21:15398442-15398199 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 336-576 |
| Cow position: | chr21:30564290-30564528 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 170 |
| Conread position: | 343-576 |
| Cow position: | chr21:25189184-25189419 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 365-575 |
| Cow position: | chr21:9574873-9574663 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 373-566 |
| Cow position: | chr21:26455761-26455957 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 387-566 |
| Cow position: | chr21:5544062-5543882 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 395-575 |
| Cow position: | chr21:19613332-19613514 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 407-563 |
| Cow position: | chr21:4280002-4279848 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 408-576 |
| Cow position: | chr21:40268774-40268606 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-566 |
| Cow position: | chr21:47976625-47976775 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 425-575 |
| Cow position: | chr21:11328273-11328120 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 431-576 |
| Cow position: | chr21:47375768-47375912 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 138, 0 |
Show alignments to all cow chromosomes.