Cow genome map
| Conread name: | Ss1.1-Utr2-C0001815_L04.5 |
| Conread position: | 211-566 |
| Cow position: | chr29:40293581-40293935 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 298 |
| Conread position: | 231-562 |
| Cow position: | chr29:27260846-27260522 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 231-575 |
| Cow position: | chr29:28658103-28657758 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 232-382 |
| Cow position: | chr29:34539319-34539171 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 232-411 |
| Cow position: | chr29:10022058-10021879 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-416 |
| Cow position: | chr29:44470668-44470849 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 232-428 |
| Cow position: | chr29:14743779-14743581 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-472 |
| Cow position: | chr29:18524451-18524223 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 232-477 |
| Cow position: | chr29:5960143-5960387 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 232-541 |
| Cow position: | chr29:42805995-42806304 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 232-556 |
| Cow position: | chr29:7428845-7428518 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 232-556 |
| Cow position: | chr29:20253442-20253759 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-556 |
| Cow position: | chr29:35274752-35274426 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-558 |
| Cow position: | chr29:253176-253512 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 232-558 |
| Cow position: | chr29:16014016-16013689 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 232-560 |
| Cow position: | chr29:5980453-5980128 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 232-560 |
| Cow position: | chr29:43965227-43964899 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 232-561 |
| Cow position: | chr29:31183675-31184006 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 232-562 |
| Cow position: | chr29:6873602-6873273 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-563 |
| Cow position: | chr29:46188-45860 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-563 |
| Cow position: | chr29:6933764-6934092 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 10 |
| Conread position: | 232-563 |
| Cow position: | chr29:21266936-21267255 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 232-563 |
| Cow position: | chr29:32288656-32288984 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 232-563 |
| Cow position: | chr29:45206783-45207112 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-564 |
| Cow position: | chr29:5398568-5398896 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 160, 18 |
| Conread position: | 232-565 |
| Cow position: | chr29:7858053-7858379 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:608360-608030 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:667140-666804 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:4518172-4518502 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:7846662-7846994 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:13898933-13899269 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:13922774-13923110 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:15260722-15260386 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:15967286-15966950 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:16037146-16036810 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:19526018-19525686 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:21226250-21226580 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:21430585-21430254 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:22991197-22990864 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 232-566 |
| Cow position: | chr29:27977561-27977223 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:32557478-32557142 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 10 |
| Conread position: | 232-566 |
| Cow position: | chr29:39424871-39424536 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-566 |
| Cow position: | chr29:40611599-40611264 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 232-572 |
| Cow position: | chr29:23978976-23979320 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 232-572 |
| Cow position: | chr29:35299193-35299529 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 232-575 |
| Cow position: | chr29:131795-132131 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:5785080-5785425 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:10845226-10845569 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:13584489-13584828 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:13850603-13850268 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 232-575 |
| Cow position: | chr29:15624435-15624086 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:32893034-32893352 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:32961585-32961927 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 232-575 |
| Cow position: | chr29:33561113-33560782 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 161, 19 |
| Conread position: | 232-576 |
| Cow position: | chr29:107330-107670 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:408988-408649 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 232-576 |
| Cow position: | chr29:530129-529786 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:1307470-1307808 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 134, 78 |
| Conread position: | 232-576 |
| Cow position: | chr29:2464603-2464258 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:4199674-4200007 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 164, 19 |
| Conread position: | 232-576 |
| Cow position: | chr29:6219515-6219186 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:6263730-6263387 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 232-576 |
| Cow position: | chr29:10645141-10644798 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:10821649-10821303 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:13018963-13019299 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:13057014-13057365 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 86, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:14209278-14208936 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:14500134-14500479 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:16346474-16346819 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:17407401-17407752 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:25930249-25929905 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 232-576 |
| Cow position: | chr29:39077444-39077103 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 17 |
| Conread position: | 235-470 |
| Cow position: | chr29:25991773-25991535 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 159, 14 |
| Conread position: | 235-535 |
| Cow position: | chr29:648093-648392 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-536 |
| Cow position: | chr29:40470686-40470985 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-558 |
| Cow position: | chr29:14374382-14374058 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 235-564 |
| Cow position: | chr29:19954870-19955194 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 235-566 |
| Cow position: | chr29:45625619-45625950 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 235-575 |
| Cow position: | chr29:2415813-2415464 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 235-575 |
| Cow position: | chr29:10249398-10249064 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 15 |
| Conread position: | 235-575 |
| Cow position: | chr29:19889850-19890185 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-575 |
| Cow position: | chr29:29703096-29702761 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 235-576 |
| Cow position: | chr29:9640504-9640162 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 235-576 |
| Cow position: | chr29:19620996-19620655 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 235-576 |
| Cow position: | chr29:19656174-19656517 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 14 |
| Conread position: | 235-576 |
| Cow position: | chr29:43325785-43326113 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 236-376 |
| Cow position: | chr29:5237289-5237428 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 236-524 |
| Cow position: | chr29:10852001-10852290 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 236-558 |
| Cow position: | chr29:16171835-16171512 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 236-576 |
| Cow position: | chr29:2839065-2838723 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 236-576 |
| Cow position: | chr29:8624918-8624583 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-576 |
| Cow position: | chr29:16689106-16689445 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 236-576 |
| Cow position: | chr29:19733492-19733825 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 237-552 |
| Cow position: | chr29:9962680-9962993 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 237-556 |
| Cow position: | chr29:3700443-3700752 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 237-563 |
| Cow position: | chr29:31095314-31094986 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 159, 12 |
| Conread position: | 237-563 |
| Cow position: | chr29:37043326-37043000 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 237-575 |
| Cow position: | chr29:6215371-6215706 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 239-566 |
| Cow position: | chr29:34875281-34875602 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 136, 52 |
| Conread position: | 241-552 |
| Cow position: | chr29:16165562-16165257 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 180, 144 |
| Conread position: | 246-522 |
| Cow position: | chr29:9852793-9852515 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 144, 72 |
| Conread position: | 246-566 |
| Cow position: | chr29:43518893-43518581 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 150, 64 |
| Conread position: | 247-532 |
| Cow position: | chr29:7750567-7750286 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 139, 87 |
| Conread position: | 247-562 |
| Cow position: | chr29:45461515-45461832 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 247-567 |
| Cow position: | chr29:13075689-13076005 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 247-575 |
| Cow position: | chr29:29617013-29616682 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 63 |
| Conread position: | 247-576 |
| Cow position: | chr29:2102127-2102459 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 248-486 |
| Cow position: | chr29:37308910-37308668 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 104, 115 |
| Conread position: | 248-558 |
| Cow position: | chr29:2746168-2745857 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 248-563 |
| Cow position: | chr29:26162553-26162236 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 248-575 |
| Cow position: | chr29:13612530-13612212 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 248-576 |
| Cow position: | chr29:15996096-15995766 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 269 |
| Conread position: | 249-543 |
| Cow position: | chr29:34739550-34739256 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 144, 84 |
| Conread position: | 249-563 |
| Cow position: | chr29:42256691-42256381 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 256 |
| Conread position: | 250-451 |
| Cow position: | chr29:44600318-44600114 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 250-553 |
| Cow position: | chr29:30404854-30404561 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 250-563 |
| Cow position: | chr29:12692034-12692344 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 250-563 |
| Cow position: | chr29:36322337-36322641 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 136, 38 |
| Conread position: | 250-566 |
| Cow position: | chr29:33141781-33142094 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 80 |
| Conread position: | 251-576 |
| Cow position: | chr29:7332129-7331808 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 255-561 |
| Cow position: | chr29:11226955-11226638 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 256-561 |
| Cow position: | chr29:5340971-5340670 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 259-576 |
| Cow position: | chr29:1002835-1003145 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 137, 168 |
| Conread position: | 263-505 |
| Cow position: | chr29:15797463-15797222 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 133, 78 |
| Conread position: | 266-540 |
| Cow position: | chr29:42363729-42363453 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 273-563 |
| Cow position: | chr29:32807196-32806920 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 278-566 |
| Cow position: | chr29:32514640-32514928 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 118, 185 |
| Conread position: | 278-575 |
| Cow position: | chr29:17343062-17343368 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 112, 218 |
| Conread position: | 278-576 |
| Cow position: | chr29:2692765-2693059 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 118, 62 |
| Conread position: | 279-572 |
| Cow position: | chr29:5390154-5390445 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 111, 162 |
| Conread position: | 280-561 |
| Cow position: | chr29:40619502-40619219 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 116, 63 |
| Conread position: | 281-561 |
| Cow position: | chr29:14453622-14453884 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 112, 22 |
| Conread position: | 287-572 |
| Cow position: | chr29:26698085-26697806 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 288-538 |
| Cow position: | chr29:9080505-9080255 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 288-561 |
| Cow position: | chr29:23055958-23055704 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 292-563 |
| Cow position: | chr29:36627598-36627850 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 122, 66 |
| Conread position: | 305-566 |
| Cow position: | chr29:26459730-26459466 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 305-576 |
| Cow position: | chr29:8665868-8666126 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 306-566 |
| Cow position: | chr29:31764382-31764645 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 212 |
| Conread position: | 310-566 |
| Cow position: | chr29:9973038-9972781 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 314-572 |
| Cow position: | chr29:25458262-25458006 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 175 |
| Conread position: | 324-561 |
| Cow position: | chr29:2887284-2887044 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 334-566 |
| Cow position: | chr29:28711325-28711090 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 176 |
| Conread position: | 336-564 |
| Cow position: | chr29:20465672-20465896 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 348-576 |
| Cow position: | chr29:34795476-34795245 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 358-564 |
| Cow position: | chr29:17137124-17137333 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 365-563 |
| Cow position: | chr29:30107230-30107037 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 368-576 |
| Cow position: | chr29:40500586-40500375 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 373-575 |
| Cow position: | chr29:1477859-1478064 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 380-576 |
| Cow position: | chr29:32804933-32805128 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 404-575 |
| Cow position: | chr29:39555174-39555005 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 408-560 |
| Cow position: | chr29:5239838-5239989 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 409-558 |
| Cow position: | chr29:34525154-34525006 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 415-563 |
| Cow position: | chr29:28698411-28698263 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.