Cow genome map

Conread name: Ss1.1-Utr2-C0001815_L04.5

Conread position: 174-566
Cow position: chr3:42151656-42151270 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 268
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 11

Conread position: 204-566
Cow position: chr3:16885127-16884772 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 198, 33

Conread position: 222-575
Cow position: chr3:18113514-18113159 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 15

Conread position: 231-481
Cow position: chr3:24637618-24637865 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 176, 18

Conread position: 231-481
Cow position: chr3:49742644-49742896 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 159, 18

Conread position: 231-554
Cow position: chr3:76352471-76352797 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 105, 19

Conread position: 231-564
Cow position: chr3:12677409-12677102 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 197, 18

Conread position: 231-566
Cow position: chr3:7326452-7326776 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 176, 18

Conread position: 231-575
Cow position: chr3:10034629-10034953 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 107, 19

Conread position: 231-575
Cow position: chr3:27920630-27920974 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 18

Conread position: 232-387
Cow position: chr3:79430565-79430412 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 18

Conread position: 232-391
Cow position: chr3:11784362-11784204 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 232-391
Cow position: chr3:28670271-28670428 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 232-416
Cow position: chr3:64813998-64813816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 158, 23

Conread position: 232-434
Cow position: chr3:21180513-21180312 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 156, 17

Conread position: 232-456
Cow position: chr3:6323839-6324065 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 158, 17

Conread position: 232-458
Cow position: chr3:9433535-9433753 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 174, 17

Conread position: 232-462
Cow position: chr3:4288266-4288495 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 232-466
Cow position: chr3:15053521-15053298 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 158, 31

Conread position: 232-469
Cow position: chr3:29641603-29641835 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 158, 17

Conread position: 232-470
Cow position: chr3:32361611-32361847 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 113, 17

Conread position: 232-472
Cow position: chr3:55729231-55729470 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 158, 17

Conread position: 232-476
Cow position: chr3:64214900-64214668 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 158, 19

Conread position: 232-481
Cow position: chr3:19590525-19590277 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 160, 17

Conread position: 232-481
Cow position: chr3:37009997-37009746 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 158, 17

Conread position: 232-511
Cow position: chr3:57996299-57996580 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-518
Cow position: chr3:2870978-2871266 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 232-526
Cow position: chr3:15500918-15501209 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 130, 18

Conread position: 232-529
Cow position: chr3:25998961-25998659 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 159, 17

Conread position: 232-536
Cow position: chr3:49003352-49003658 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-553
Cow position: chr3:33844412-33844093 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 158, 18

Conread position: 232-554
Cow position: chr3:32704263-32703931 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 147, 17

Conread position: 232-558
Cow position: chr3:2366960-2366632 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 232-558
Cow position: chr3:70889463-70889785 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 168, 23

Conread position: 232-559
Cow position: chr3:4029916-4030258 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 160, 17

Conread position: 232-560
Cow position: chr3:40102614-40102293 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 19

Conread position: 232-561
Cow position: chr3:41082355-41082679 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-561
Cow position: chr3:42449296-42449615 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 17

Conread position: 232-561
Cow position: chr3:58128268-58128589 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 222, 17

Conread position: 232-562
Cow position: chr3:34028741-34028411 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 17

Conread position: 232-563
Cow position: chr3:596315-596635 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 164, 17

Conread position: 232-563
Cow position: chr3:36401780-36402108 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 17

Conread position: 232-563
Cow position: chr3:48602436-48602767 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 232-563
Cow position: chr3:73303690-73304019 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-564
Cow position: chr3:3982817-3983151 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 232-564
Cow position: chr3:14862385-14862721 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 232-564
Cow position: chr3:48524930-48525262 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 17

Conread position: 232-564
Cow position: chr3:57482538-57482208 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 232-564
Cow position: chr3:61675884-61676209 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 146, 17

Conread position: 232-564
Cow position: chr3:63256297-63256627 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 17

Conread position: 232-565
Cow position: chr3:29329101-29328766 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 232-565
Cow position: chr3:50124810-50124483 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr3:3525227-3525545 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 17

Conread position: 232-566
Cow position: chr3:7156529-7156198 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr3:7246923-7246586 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr3:13035871-13036207 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr3:13724533-13724194 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr3:18861624-18861960 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-566
Cow position: chr3:29324343-29324672 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 120

Conread position: 232-566
Cow position: chr3:30990063-30989727 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr3:34014523-34014859 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 232-566
Cow position: chr3:49998323-49998655 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr3:58887951-58887621 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 105

Conread position: 232-566
Cow position: chr3:68718525-68718189 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr3:68890387-68890054 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-566
Cow position: chr3:74059659-74059994 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 232-566
Cow position: chr3:83766434-83766770 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:1031156-1031494 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:6784591-6784934 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 232-575
Cow position: chr3:16225072-16225407 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 17

Conread position: 232-575
Cow position: chr3:19798971-19798626 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:19941111-19941442 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 177, 17

Conread position: 232-575
Cow position: chr3:22338103-22338434 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:26743690-26743345 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 232-575
Cow position: chr3:27865359-27865701 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 18

Conread position: 232-575
Cow position: chr3:29574932-29574594 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:32620860-32620515 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:35611345-35611680 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:37971236-37971576 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 17

Conread position: 232-575
Cow position: chr3:38253927-38254270 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 84, 8

Conread position: 232-575
Cow position: chr3:39556403-39556054 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 17

Conread position: 232-575
Cow position: chr3:40337958-40337617 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:41208414-41208069 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:44670666-44670315 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:46859103-46858758 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:47079425-47079087 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:48845184-48845532 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 232-575
Cow position: chr3:49563193-49563536 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-575
Cow position: chr3:49908831-49908486 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 17

Conread position: 232-575
Cow position: chr3:50203722-50204073 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 17

Conread position: 232-575
Cow position: chr3:53881296-53880958 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:56328306-56328652 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-575
Cow position: chr3:56337770-56337425 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 232-575
Cow position: chr3:62881553-62881892 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 232-575
Cow position: chr3:64428037-64427710 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 17

Conread position: 232-575
Cow position: chr3:72106611-72106268 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 18

Conread position: 232-575
Cow position: chr3:77580809-77581145 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 17

Conread position: 232-576
Cow position: chr3:2708683-2708343 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:6687988-6688341 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 13

Conread position: 232-576
Cow position: chr3:7477736-7477395 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:17938810-17938470 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:18813694-18814034 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 232-576
Cow position: chr3:19754773-19754434 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:22725584-22725242 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 232-576
Cow position: chr3:23009576-23009919 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:23205697-23205352 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 10

Conread position: 232-576
Cow position: chr3:24443913-24443567 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr3:24573962-24573632 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 169, 17

Conread position: 232-576
Cow position: chr3:24587062-24586716 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 23

Conread position: 232-576
Cow position: chr3:34875622-34875973 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 17

Conread position: 232-576
Cow position: chr3:36690011-36689666 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 17

Conread position: 232-576
Cow position: chr3:38868766-38869108 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:45976684-45977029 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 17

Conread position: 232-576
Cow position: chr3:49135375-49135031 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:49543020-49542674 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 161, 17

Conread position: 232-576
Cow position: chr3:53048602-53048252 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 82, 17

Conread position: 232-576
Cow position: chr3:57741714-57742053 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 232-576
Cow position: chr3:59863749-59864082 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 163, 17

Conread position: 232-576
Cow position: chr3:63690072-63689718 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 17

Conread position: 232-576
Cow position: chr3:64813262-64812916 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr3:66622400-66622743 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:66969698-66969353 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 17

Conread position: 232-576
Cow position: chr3:69931652-69931306 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:72632254-72632596 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:75039666-75039318 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 232-576
Cow position: chr3:78025251-78024905 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 17

Conread position: 233-563
Cow position: chr3:84112620-84112942 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 160, 16

Conread position: 233-576
Cow position: chr3:19796013-19795671 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 16

Conread position: 235-383
Cow position: chr3:33635452-33635597 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 235-384
Cow position: chr3:15657353-15657206 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 144, 14

Conread position: 235-391
Cow position: chr3:22085244-22085091 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 14

Conread position: 235-411
Cow position: chr3:54773119-54773285 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 235-461
Cow position: chr3:36862270-36862042 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 155, 14

Conread position: 235-467
Cow position: chr3:34040388-34040157 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 157, 14

Conread position: 235-511
Cow position: chr3:80580618-80580897 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 107, 14

Conread position: 235-555
Cow position: chr3:64691228-64691556 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 150, 14

Conread position: 235-560
Cow position: chr3:24457015-24456682 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 110, 14

Conread position: 235-564
Cow position: chr3:24355787-24356111 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 155, 14

Conread position: 235-564
Cow position: chr3:54787255-54787594 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 14

Conread position: 235-564
Cow position: chr3:57455193-57455518 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 155, 14

Conread position: 235-564
Cow position: chr3:72670365-72670040 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 14

Conread position: 235-564
Cow position: chr3:74850947-74850618 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 14

Conread position: 235-566
Cow position: chr3:599686-600003 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 158, 14

Conread position: 235-566
Cow position: chr3:29129282-29129609 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 16

Conread position: 235-566
Cow position: chr3:34505162-34504830 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 235-566
Cow position: chr3:37627151-37627482 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 14

Conread position: 235-566
Cow position: chr3:64652851-64653184 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 235-574
Cow position: chr3:77589025-77588702 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 157, 16

Conread position: 235-575
Cow position: chr3:1504293-1504625 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 14

Conread position: 235-575
Cow position: chr3:1705373-1705035 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 153, 7

Conread position: 235-575
Cow position: chr3:31320540-31320868 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 15

Conread position: 235-575
Cow position: chr3:33325304-33325649 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 14

Conread position: 235-575
Cow position: chr3:64025945-64025604 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 13

Conread position: 235-576
Cow position: chr3:18461925-18461594 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 14

Conread position: 235-576
Cow position: chr3:19946432-19946770 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 158, 14

Conread position: 235-576
Cow position: chr3:21004006-21004343 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 173, 14

Conread position: 235-576
Cow position: chr3:23288148-23287808 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 235-576
Cow position: chr3:36876474-36876132 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 14

Conread position: 235-576
Cow position: chr3:56147496-56147834 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 14

Conread position: 236-407
Cow position: chr3:13475424-13475589 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 154, 86

Conread position: 236-560
Cow position: chr3:10242843-10243165 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 13

Conread position: 236-575
Cow position: chr3:52510455-52510788 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 172, 14

Conread position: 236-576
Cow position: chr3:3059087-3059421 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 157, 13

Conread position: 236-576
Cow position: chr3:24347384-24347721 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 13

Conread position: 236-576
Cow position: chr3:43191085-43190743 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 6

Conread position: 236-576
Cow position: chr3:49733757-49734094 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 13

Conread position: 236-576
Cow position: chr3:54654956-54655297 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 154, 14

Conread position: 237-566
Cow position: chr3:14890122-14889795 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 12

Conread position: 238-472
Cow position: chr3:56399434-56399668 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 152, 11

Conread position: 238-478
Cow position: chr3:43317678-43317438 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 77, 11

Conread position: 238-558
Cow position: chr3:3789827-3790146 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 11

Conread position: 238-558
Cow position: chr3:3938044-3938353 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 152, 11

Conread position: 238-558
Cow position: chr3:35886154-35885828 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 136, 11

Conread position: 239-535
Cow position: chr3:63240029-63239738 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 10

Conread position: 246-470
Cow position: chr3:14798616-14798842 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 5

Conread position: 246-563
Cow position: chr3:51937872-51937558 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 146, 82

Conread position: 246-566
Cow position: chr3:68697773-68697450 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 246-566
Cow position: chr3:68871555-68871233 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 305

Conread position: 246-567
Cow position: chr3:53413287-53413594 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 161, 93

Conread position: 246-575
Cow position: chr3:69963598-69963275 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 164, 93

Conread position: 247-440
Cow position: chr3:82157512-82157706 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 50

Conread position: 247-478
Cow position: chr3:67747110-67746882 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 143, 87

Conread position: 247-563
Cow position: chr3:5885703-5886012 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 78

Conread position: 247-563
Cow position: chr3:40825594-40825912 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 75

Conread position: 247-564
Cow position: chr3:38495973-38496293 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 146, 78

Conread position: 247-566
Cow position: chr3:19125498-19125813 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 67

Conread position: 247-575
Cow position: chr3:71140417-71140091 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 27, 64

Conread position: 247-576
Cow position: chr3:30320459-30320791 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 247-576
Cow position: chr3:31121947-31121617 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 124

Conread position: 247-576
Cow position: chr3:46504766-46505093 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 100

Conread position: 248-553
Cow position: chr3:62820999-62821294 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 131

Conread position: 248-561
Cow position: chr3:19719340-19719022 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 62

Conread position: 248-575
Cow position: chr3:36716440-36716117 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 150, 62

Conread position: 249-566
Cow position: chr3:11510644-11510321 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 141, 108

Conread position: 249-575
Cow position: chr3:31020880-31021209 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 0

Conread position: 249-576
Cow position: chr3:48239460-48239785 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 158, 95

Conread position: 250-478
Cow position: chr3:78693264-78693036 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 92, 43

Conread position: 250-564
Cow position: chr3:67628554-67628236 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 111, 70

Conread position: 252-574
Cow position: chr3:58855449-58855775 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 8, 62

Conread position: 252-575
Cow position: chr3:62787530-62787221 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 134, 78

Conread position: 252-576
Cow position: chr3:76004591-76004267 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 78, 96

Conread position: 253-538
Cow position: chr3:74752812-74753084 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 137, 161

Conread position: 255-553
Cow position: chr3:52662607-52662903 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 135, 75

Conread position: 255-563
Cow position: chr3:30616733-30616423 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 248

Conread position: 256-560
Cow position: chr3:77452497-77452792 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 72

Conread position: 257-566
Cow position: chr3:15415675-15415983 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 252

Conread position: 257-576
Cow position: chr3:81167274-81166954 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 47, 24

Conread position: 258-566
Cow position: chr3:12565147-12564832 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 256

Conread position: 263-563
Cow position: chr3:82930848-82931149 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 262

Conread position: 264-562
Cow position: chr3:40209258-40208963 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 46

Conread position: 264-565
Cow position: chr3:6663628-6663928 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 126, 233

Conread position: 265-563
Cow position: chr3:53517813-53518111 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 75

Conread position: 266-531
Cow position: chr3:61555414-61555151 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 127, 86

Conread position: 271-563
Cow position: chr3:80931213-80930924 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 97

Conread position: 273-549
Cow position: chr3:77366854-77366570 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 55

Conread position: 278-533
Cow position: chr3:7950241-7949984 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 144

Conread position: 279-566
Cow position: chr3:65920086-65920360 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 55

Conread position: 282-564
Cow position: chr3:82362862-82363150 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 53

Conread position: 283-553
Cow position: chr3:38002358-38002621 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 27

Conread position: 283-560
Cow position: chr3:62913320-62913046 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 54

Conread position: 284-559
Cow position: chr3:45692752-45692484 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 23

Conread position: 296-576
Cow position: chr3:66848943-66848667 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 64

Conread position: 304-562
Cow position: chr3:64134609-64134866 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 26

Conread position: 305-566
Cow position: chr3:29580918-29581183 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 85, 0

Conread position: 306-566
Cow position: chr3:6713265-6713526 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 30

Conread position: 307-537
Cow position: chr3:53392626-53392390 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 33

Conread position: 310-564
Cow position: chr3:71144672-71144417 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 100

Conread position: 312-566
Cow position: chr3:34458606-34458349 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 314-519
Cow position: chr3:39080790-39080998 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 28

Conread position: 315-566
Cow position: chr3:32491581-32491835 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 316-566
Cow position: chr3:19882740-19882993 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 318-566
Cow position: chr3:6382503-6382754 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 319-561
Cow position: chr3:46387660-46387893 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 35

Conread position: 335-575
Cow position: chr3:38491737-38491979 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 20

Conread position: 336-534
Cow position: chr3:26752144-26751946 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 84

Conread position: 339-562
Cow position: chr3:48361220-48361446 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 340-575
Cow position: chr3:24264489-24264728 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 341-576
Cow position: chr3:32218105-32218341 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 55, 25

Conread position: 347-576
Cow position: chr3:59331749-59331986 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 361-576
Cow position: chr3:49561402-49561188 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 18

Conread position: 371-563
Cow position: chr3:46807492-46807688 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 113

Conread position: 373-560
Cow position: chr3:79143311-79143506 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 16

Conread position: 373-562
Cow position: chr3:79592461-79592653 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 19, 113

Conread position: 378-564
Cow position: chr3:12664264-12664448 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 130

Conread position: 380-576
Cow position: chr3:32327099-32326900 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 380-576
Cow position: chr3:33635743-33635937 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 125

Conread position: 382-566
Cow position: chr3:2920577-2920764 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 395-566
Cow position: chr3:4289111-4288938 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 395-576
Cow position: chr3:58035878-58036055 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 114

Conread position: 396-575
Cow position: chr3:37658312-37658491 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 155

Conread position: 400-566
Cow position: chr3:22085060-22084893 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 113

Conread position: 403-564
Cow position: chr3:15656923-15656761 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 405-566
Cow position: chr3:39871815-39871657 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 408-564
Cow position: chr3:61276952-61277108 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 408-566
Cow position: chr3:6837677-6837521 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 408-575
Cow position: chr3:44926185-44926348 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 415-575
Cow position: chr3:5421511-5421352 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 419-563
Cow position: chr3:77621324-77621469 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 46

Conread position: 422-566
Cow position: chr3:26683284-26683140 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 440-576
Cow position: chr3:65206495-65206358 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.